BLASTX nr result

ID: Coptis23_contig00004746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004746
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populu...   331   2e-88
ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   328   2e-87
ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populu...   328   2e-87
ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ri...   288   1e-75
ref|XP_003526431.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin ...   286   9e-75

>ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222866270|gb|EEF03401.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  331 bits (849), Expect = 2e-88
 Identities = 158/314 (50%), Positives = 221/314 (70%), Gaps = 3/314 (0%)
 Frame = -2

Query: 1021 MKVERKIPFLDLTKDP-KDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGEEMF 845
            M  + +IPFLD++++    +E  S+ WK L  +VREACE +G F + Y+K+PT L EEMF
Sbjct: 1    MAAKVEIPFLDISEEALAGIEVKSEKWKELCNQVREACETHGIFFLVYDKIPTSLREEMF 60

Query: 844  KASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPD 665
             A K LFDLP+E K K++N KPY  Y+G    +P +ES G++DA T+D ++ F   +WP+
Sbjct: 61   VALKALFDLPEETKNKHVNPKPYRSYLGNCPVIPFHESFGVDDAPTLDASQAFTNLMWPE 120

Query: 664  GNPVFCETVNSISNKLYDLELLILKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHS-N 488
            GNP FCET++ +S+K+ +L  L++KM+ +SF  EK Y+S+VE   +I R+  YK P S  
Sbjct: 121  GNPSFCETIHGMSSKMQELNFLVMKMIYESFDIEKLYDSFVEETTSIFRIMKYKVPPSAT 180

Query: 487  DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNAR 311
            D  + L  HTD +++T+LCQ E QGLE+ +K G W +V     AF   VG+ALKAWSN R
Sbjct: 181  DSSIGLVAHTDKNAITILCQNEVQGLEIQTKNGYWAQVMVPENAFTAVVGDALKAWSNGR 240

Query: 310  LHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYAS 131
            LH A+HRV+ +G++ RYS GLF  PKE AV+E+P+ELVDKEHPL YRPFNY DY++Y+ S
Sbjct: 241  LHAARHRVVISGEKDRYSCGLFSMPKEEAVVEVPDELVDKEHPLQYRPFNYSDYISYFVS 300

Query: 130  NLHMDNVLEVYAGV 89
             L  D+ LE+YAG+
Sbjct: 301  KL-SDDALEIYAGI 313


>ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 316

 Score =  328 bits (841), Expect = 2e-87
 Identities = 154/308 (50%), Positives = 212/308 (68%), Gaps = 1/308 (0%)
 Frame = -2

Query: 1009 RKIPFLDLTKDPKDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGEEMFKASKE 830
            ++IPFL+   D  DLE+ S+ WK L  KVREACE YGCF +  + +P  L +EMF   K 
Sbjct: 8    QEIPFLEFPGDDLDLEQESEEWKGLRSKVREACETYGCFGLVCDAIPAKLRQEMFMVMKT 67

Query: 829  LFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPDGNPVF 650
            LFDLP+E K K+ ++KPY+ Y GK   VPL ES GI+DA     A+ F   +WP+GNP F
Sbjct: 68   LFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNLLWPEGNPAF 127

Query: 649  CETVNSISNKLYDLELLILKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHSNDLQMAL 470
            C  + S++ K+ +L  ++LK++++S G EKYYNS  E++ ++ R+  Y  P SND  + L
Sbjct: 128  CGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVPPSNDSAIGL 187

Query: 469  APHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNARLHTAKH 293
              HTD + LT+LCQ E QGLEVLSKEG W+R+     +F+V +G+ LKAW+N RLH  +H
Sbjct: 188  VTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKAWTNGRLHAVRH 247

Query: 292  RVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYASNLHMDN 113
            RV+ NGD+ RYS G+F+ P +   IE+PEELVD +HPL YRPF Y DY++++ SN+  D+
Sbjct: 248  RVVMNGDKDRYSCGMFVLPGDTVTIEVPEELVDNDHPLRYRPFTYSDYMSFFTSNI-CDD 306

Query: 112  VLEVYAGV 89
             LEVYAGV
Sbjct: 307  ALEVYAGV 314


>ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222855568|gb|EEE93115.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 314

 Score =  328 bits (840), Expect = 2e-87
 Identities = 160/317 (50%), Positives = 223/317 (70%), Gaps = 3/317 (0%)
 Frame = -2

Query: 1030 IGIMKVERKIPFLDLTKDP-KDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGE 854
            + + KVE  IP LD +++    LE  S+ WK L  +VREACE +G F + Y+K+P  L E
Sbjct: 1    MAVAKVE--IPVLDFSEEALTGLEVKSEKWKELCNQVREACETHGVFFLVYDKIPGSLRE 58

Query: 853  EMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQI 674
            EMF A K LFDLP+E K +++N KPY  Y+GK   +P +ES G++DA T+D ++ F   +
Sbjct: 59   EMFGAMKALFDLPEETKNRHVNPKPYRSYLGKCPVIPFHESFGVDDAPTLDASQAFTTLM 118

Query: 673  WPDGNPVFCETVNSISNKLYDLELLILKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPH 494
            WP+GNP FCET++S+S+K+ +L  L++KM+ +SFG EK Y+S++E   +I++V  YK P 
Sbjct: 119  WPEGNPSFCETIHSMSSKMQELNFLVMKMIYESFGIEKLYDSFLEETTSILKVMKYKVPP 178

Query: 493  SN-DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWS 320
            S+ +  + L  HTD +++T+LCQ E QGLEV +K G+W +V     AF   VG+ +KAWS
Sbjct: 179  SDTESAIGLVAHTDKNAITILCQNEVQGLEVQTKNGDWAQVMVPENAFTAIVGDTVKAWS 238

Query: 319  NARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNY 140
            N RLH A+HRV+ +GDR RYS GLF  PKE AVIE+P ELVDKEHPL YRPFN+ DYL+Y
Sbjct: 239  NGRLHAARHRVVISGDRDRYSCGLFSTPKEEAVIEVPNELVDKEHPLQYRPFNFSDYLSY 298

Query: 139  YASNLHMDNVLEVYAGV 89
            + S L  D+ LE+YA +
Sbjct: 299  FVSKL-SDDALEIYASI 314


>ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ricinus communis]
           gi|223545541|gb|EEF47046.1| Gibberellin
           2-beta-dioxygenase, putative [Ricinus communis]
          Length = 316

 Score =  288 bits (738), Expect = 1e-75
 Identities = 142/302 (47%), Positives = 201/302 (66%), Gaps = 9/302 (2%)
 Frame = -2

Query: 967 LEEGSDGWKCLSKKVREACEEYGCFQVKYN--KLPTHLGEEMFKASKELFDLPDEIKVKN 794
           L  GS+  + L  +VR+ACE +GCF + Y+   +P  L + +F + K LFDLP++ K K 
Sbjct: 16  LSSGSESRRELCNRVRKACESHGCFLLMYDHGNIPAKLRQNLFVSMKALFDLPEDTKTKY 75

Query: 793 LNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPDGNPVFCETVNSISNKLY 614
           +N KPY  Y G+   +P YES G++DA  +   + F   +WP GN  FCE ++ +S+K+ 
Sbjct: 76  VNPKPYRSYTGRSPVIPFYESFGLDDAHKLGQVQDFTNLMWPQGNTSFCEILHVMSSKML 135

Query: 613 DLELLILKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHSN------DLQMALAPHTDN 452
           ++ L++LKM+ +SFG EK+Y+S+++ + ++ +V  Y AP SN      D  +AL  H D 
Sbjct: 136 EMNLMVLKMIFESFGMEKHYDSHIQDSTSLFKVMKYIAPPSNGRGSGEDSAIALRAHRDK 195

Query: 451 SSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNARLHTAKHRVMTNG 275
           +++T+LCQ E QGLEV SK+GEW RV     AFVV VGEALK WSN RL  A+HRV+ NG
Sbjct: 196 NAITILCQNEVQGLEVESKDGEWARVMVPQDAFVVIVGEALKVWSNGRLEAARHRVVING 255

Query: 274 DRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYASNLHMDNVLEVYA 95
              RYS  LF  PKE + IE+P ELVDK+HPLLYRPF + DY++Y+ S L  D+ LE+YA
Sbjct: 256 KEDRYSCALFSMPKEESKIEVPCELVDKDHPLLYRPFIFSDYISYFVSKL-SDDALEIYA 314

Query: 94  GV 89
           G+
Sbjct: 315 GI 316


>ref|XP_003526431.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin 20 oxidase 1-like
            [Glycine max]
          Length = 313

 Score =  286 bits (731), Expect = 9e-75
 Identities = 154/320 (48%), Positives = 210/320 (65%), Gaps = 9/320 (2%)
 Frame = -2

Query: 1021 MKVERKIPFLDLTKDPKDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKL-PTHLGEEMF 845
            M+ ER+I  +      K LEEGS+ WK +SKKVREACE +GCF +  +++ P  + EE F
Sbjct: 1    MESEREIMMIPCFDFGKALEEGSEEWKEMSKKVREACESHGCFLLVCDEMIPKGVREEFF 60

Query: 844  KASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPD 665
               + LFDLP+E K+K+++ KPY  Y GK   +PL E+ GI+D      A  F   +WP 
Sbjct: 61   SNMEALFDLPEERKMKHISPKPYSSYSGKSPVIPLSETFGIDDVPLSASAEAFTNLMWPQ 120

Query: 664  GNPVFCETVNSISNKLYDLELLILKMVMQSFGAEKYYNSYVE-----SNNTIVRVNGYKA 500
            GNP FCET+  +S+K+  L  LILKM+++ +G +++Y S VE     SN+ +++   YK 
Sbjct: 121  GNPPFCETLKIMSSKMLKLSSLILKMIVEDYGIQQHYISDVEKMKSSSNSRLIK---YKI 177

Query: 499  P-HSNDLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKA 326
            P ++ND    L  HTD ++LT++CQ E QGL+VLSK   W+    L   FVV VG+ LKA
Sbjct: 178  PENNNDSNTGLVSHTDKNALTIICQNEVQGLQVLSKTDNWIE---LXDGFVVIVGDILKA 234

Query: 325  WSNARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVD-KEHPLLYRPFNYMDY 149
            WSN RLH A HRVM +GD++RYSFGLF  PKE   IE+P ELVD K HPL Y PF Y +Y
Sbjct: 235  WSNGRLHAATHRVMMSGDKERYSFGLFTMPKEEMDIEVPIELVDEKIHPLRYHPFKYGEY 294

Query: 148  LNYYASNLHMDNVLEVYAGV 89
            ++Y+ SNL  +N LEV+AG+
Sbjct: 295  ISYFVSNL-KENALEVFAGL 313


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