BLASTX nr result

ID: Coptis23_contig00004745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004745
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260...   365   1e-98
ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93
ref|XP_002516645.1| protein binding protein, putative [Ricinus c...   344   3e-92
emb|CBI15919.3| unnamed protein product [Vitis vinifera]              341   3e-91
ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|2...   333   4e-89

>ref|XP_002278599.2| PREDICTED: uncharacterized protein LOC100260376 [Vitis vinifera]
          Length = 264

 Score =  365 bits (938), Expect = 1e-98
 Identities = 189/266 (71%), Positives = 221/266 (83%), Gaps = 1/266 (0%)
 Frame = +1

Query: 178 MKKHNFKRVVVSENKKNEEIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINV 357
           M+K + K VV   N   EEI WELRPGGMLVQKR  G  AS PMIKIKVSHGSY H I +
Sbjct: 1   MRKSSCKGVV--GNVCKEEIDWELRPGGMLVQKRNAGDAASSPMIKIKVSHGSYHHYITI 58

Query: 358 PAQSTFGDLKRLLAHETGLKPKEQRLLFRGKEKEDTDCLHMAGVVDMSKVVLLEDPASRE 537
           PAQSTFGDLKR+LAHETGL+PKEQRLLFRGKEKE+ +CLHM GV +MSKV+LLEDPAS+E
Sbjct: 59  PAQSTFGDLKRVLAHETGLEPKEQRLLFRGKEKENDECLHMVGVKEMSKVILLEDPASKE 118

Query: 538 KKLQERKNDSGVSKSCEAIAKVRVEVDKLTKKVSALESIMRNGTKIAEKEFNILTELFMM 717
           KKL+E K D G+ K+ EA+A VRVEVDKL++K+ ALE  +R G K+ +KEF +LTEL M+
Sbjct: 119 KKLEEMKKDQGILKAYEAVALVRVEVDKLSEKIVALERAVRGGNKVVDKEFVVLTELLMV 178

Query: 718 QLLKLDGIAAEGEAKDQRRIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFE 897
           QLL+LD I A+GEAK QRRIEV R+QSFV+TLD LK+RNSNPF+N +NAVSVTTKW  FE
Sbjct: 179 QLLQLDTIEADGEAKVQRRIEVCRIQSFVDTLDNLKARNSNPFNNSTNAVSVTTKWVAFE 238

Query: 898 SGVGSLSAPT-TKSSTKITKDWELFD 972
           SG+GSLSAPT  +SSTKIT+DWELFD
Sbjct: 239 SGIGSLSAPTPLQSSTKITQDWELFD 264


>ref|XP_002313979.1| predicted protein [Populus trichocarpa] gi|222850387|gb|EEE87934.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  348 bits (892), Expect = 2e-93
 Identities = 176/248 (70%), Positives = 211/248 (85%), Gaps = 1/248 (0%)
 Frame = +1

Query: 232 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 411
           EI WELRPGGMLVQKR  GVG+SGPMIKIKVSHGS  ++ +VPAQSTFGDLK++LA+ETG
Sbjct: 18  EIDWELRPGGMLVQKRDVGVGSSGPMIKIKVSHGSCHYDTDVPAQSTFGDLKKVLANETG 77

Query: 412 LKPKEQRLLFRGKEKEDTDCLHMAGVVDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 591
           L+P+EQRLLFRGKE+E+ + LHM GV DMSKV+L EDPAS+E+KL+E K + G  ++CEA
Sbjct: 78  LEPQEQRLLFRGKERENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQGTFEACEA 137

Query: 592 IAKVRVEVDKLTKKVSALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 771
           +A+VR EVDKL +KV ALE+   +GT IA+KEF +LTEL M+QLLKLD I A GEAK QR
Sbjct: 138 VARVRAEVDKLCEKVVALETTFCSGTAIADKEFVVLTELLMIQLLKLDSIEANGEAKVQR 197

Query: 772 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKI 948
           RIEVRR+QSFV+TLD LK RNSNPFSN S+AVSVTTKW+ F SGVGSLSAP   +S+TK+
Sbjct: 198 RIEVRRIQSFVDTLDNLKVRNSNPFSNSSSAVSVTTKWETFASGVGSLSAPVPIQSATKV 257

Query: 949 TKDWELFD 972
           T+DWELFD
Sbjct: 258 TQDWELFD 265


>ref|XP_002516645.1| protein binding protein, putative [Ricinus communis]
           gi|223544217|gb|EEF45740.1| protein binding protein,
           putative [Ricinus communis]
          Length = 265

 Score =  344 bits (882), Expect = 3e-92
 Identities = 170/248 (68%), Positives = 208/248 (83%), Gaps = 1/248 (0%)
 Frame = +1

Query: 232 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 411
           +I WELRPGGMLVQKR  G G+SGPMIKIKVSHGSY +E+ VPAQSTFGDLK++L HE G
Sbjct: 18  QIDWELRPGGMLVQKREVGDGSSGPMIKIKVSHGSYHYEVTVPAQSTFGDLKKVLVHEAG 77

Query: 412 LKPKEQRLLFRGKEKEDTDCLHMAGVVDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 591
           L+ +EQRLLFRGKEKED +CLHM GV D+SKV+LLEDPA +E+KL+E K +  + K+CEA
Sbjct: 78  LEAEEQRLLFRGKEKEDNECLHMEGVKDLSKVILLEDPACKERKLEEMKKNEAILKACEA 137

Query: 592 IAKVRVEVDKLTKKVSALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 771
           +A+VR EVDKL++KV  LE+ + +GT +AEKEF +LTEL M+QLLKLD I A+GEAK QR
Sbjct: 138 VARVRAEVDKLSQKVVTLETTVSSGTLVAEKEFIVLTELLMVQLLKLDMIEADGEAKVQR 197

Query: 772 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPTT-KSSTKI 948
           RIEVRRVQSFV+ LD LK+RNSN  SN SN VSVT KW+ F+SGVGS+S P + +S+TK+
Sbjct: 198 RIEVRRVQSFVDALDKLKARNSNTLSNSSNEVSVTAKWETFDSGVGSVSTPVSIQSATKV 257

Query: 949 TKDWELFD 972
           T+DWELFD
Sbjct: 258 TQDWELFD 265


>emb|CBI15919.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  341 bits (874), Expect = 3e-91
 Identities = 173/238 (72%), Positives = 203/238 (85%), Gaps = 1/238 (0%)
 Frame = +1

Query: 262 MLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETGLKPKEQRLLF 441
           MLVQKR  G  AS PMIKIKVSHGSY H I +PAQSTFGDLKR+LAHETGL+PKEQRLLF
Sbjct: 1   MLVQKRNAGDAASSPMIKIKVSHGSYHHYITIPAQSTFGDLKRVLAHETGLEPKEQRLLF 60

Query: 442 RGKEKEDTDCLHMAGVVDMSKVVLLEDPASREKKLQERKNDSGVSKSCEAIAKVRVEVDK 621
           RGKEKE+ +CLHM GV +MSKV+LLEDPAS+EKKL+E K D G+ K+ EA+A VRVEVDK
Sbjct: 61  RGKEKENDECLHMVGVKEMSKVILLEDPASKEKKLEEMKKDQGILKAYEAVALVRVEVDK 120

Query: 622 LTKKVSALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQRRIEVRRVQSF 801
           L++K+ ALE  +R G K+ +KEF +LTEL M+QLL+LD I A+GEAK QRRIEV R+QSF
Sbjct: 121 LSEKIVALERAVRGGNKVVDKEFVVLTELLMVQLLQLDTIEADGEAKVQRRIEVCRIQSF 180

Query: 802 VETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKITKDWELFD 972
           V+TLD LK+RNSNPF+N +NAVSVTTKW  FESG+GSLSAPT  +SSTKIT+DWELFD
Sbjct: 181 VDTLDNLKARNSNPFNNSTNAVSVTTKWVAFESGIGSLSAPTPLQSSTKITQDWELFD 238


>ref|XP_002298491.1| predicted protein [Populus trichocarpa] gi|222845749|gb|EEE83296.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  333 bits (855), Expect = 4e-89
 Identities = 171/248 (68%), Positives = 207/248 (83%), Gaps = 1/248 (0%)
 Frame = +1

Query: 232 EIGWELRPGGMLVQKRIDGVGASGPMIKIKVSHGSYQHEINVPAQSTFGDLKRLLAHETG 411
           EI WELRPGGMLVQK   G G+SGPMIKIKVSHG   ++I VPAQSTFGDLK++LAHETG
Sbjct: 16  EIHWELRPGGMLVQKMDVGDGSSGPMIKIKVSHGLCHYDIAVPAQSTFGDLKKVLAHETG 75

Query: 412 LKPKEQRLLFRGKEKEDTDCLHMAGVVDMSKVVLLEDPASREKKLQERKNDSGVSKSCEA 591
           L+ KEQRLLF+GKEKE+ + LHM GV DMSKV+L EDPAS+E+KL+E K +    K+ EA
Sbjct: 76  LESKEQRLLFKGKEKENDEYLHMVGVKDMSKVILFEDPASKERKLEEMKRNQDTLKAYEA 135

Query: 592 IAKVRVEVDKLTKKVSALESIMRNGTKIAEKEFNILTELFMMQLLKLDGIAAEGEAKDQR 771
           +A+VR EVDKL +KV ALE+ +R+GTKIAEKEF++LTEL M+QLLKLD I A+G+AK QR
Sbjct: 136 VARVRAEVDKLCEKVVALETNIRSGTKIAEKEFSVLTELLMIQLLKLDSIEADGQAKVQR 195

Query: 772 RIEVRRVQSFVETLDILKSRNSNPFSNGSNAVSVTTKWQKFESGVGSLSAPT-TKSSTKI 948
           +IEVRR+QSFV+TL+ LK RNS  FS+ SNAVSVTTKW+ F SGVGSLSAP   +S+TK+
Sbjct: 196 KIEVRRIQSFVDTLENLKVRNSKSFSHNSNAVSVTTKWETFASGVGSLSAPVPLQSATKL 255

Query: 949 TKDWELFD 972
            +DWELFD
Sbjct: 256 NQDWELFD 263


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