BLASTX nr result

ID: Coptis23_contig00004738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004738
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus c...    81   3e-13
ref|XP_003631971.1| PREDICTED: uncharacterized protein LOC100853...    79   8e-13
emb|CBI26371.3| unnamed protein product [Vitis vinifera]               79   8e-13
ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_003610789.1| hypothetical protein MTR_5g007040 [Medicago ...    69   1e-09

>ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus communis]
           gi|223543647|gb|EEF45175.1| hypothetical protein
           RCOM_0908960 [Ricinus communis]
          Length = 1067

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 41/73 (56%), Positives = 49/73 (67%)
 Frame = +3

Query: 516 DYNGGLSTELGLSLDPANVCTQPEMQTDTGAGANANSRDEMVFLKTTPVSELVWSPHKGL 695
           D N   ST L L+L  +N C Q  +  D GAGANA S  ++ F+ T P+SELVWSPHKGL
Sbjct: 5   DKNIEPSTNLSLALGYSNQCIQRNLSNDPGAGANAASTADITFVATDPLSELVWSPHKGL 64

Query: 696 SLKCADCSLSDKK 734
           SL+CAD S  DKK
Sbjct: 65  SLRCADGSFIDKK 77


>ref|XP_003631971.1| PREDICTED: uncharacterized protein LOC100853028 [Vitis vinifera]
          Length = 714

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +3

Query: 471 NGCPAERMIVQKSTIDY-NGGLSTELGLSLDPANVCTQPEMQTDTGAGANANSRDEMVFL 647
           +G P E +I  K   D  N     +LGL+L  ++ C    +  D+GAGANA SR +M  +
Sbjct: 12  SGLPIEEIIQPKMNADNDNKEQLFDLGLALGYSSQCIGKALNNDSGAGANAGSRVDMTLV 71

Query: 648 KTTPVSELVWSPHKGLSLKCADCSLSDKK 734
            T P+SELVWSPHKGLSLKCA+ S  +K+
Sbjct: 72  ATDPLSELVWSPHKGLSLKCAENSTDEKR 100


>emb|CBI26371.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +3

Query: 471 NGCPAERMIVQKSTIDY-NGGLSTELGLSLDPANVCTQPEMQTDTGAGANANSRDEMVFL 647
           +G P E +I  K   D  N     +LGL+L  ++ C    +  D+GAGANA SR +M  +
Sbjct: 60  SGLPIEEIIQPKMNADNDNKEQLFDLGLALGYSSQCIGKALNNDSGAGANAGSRVDMTLV 119

Query: 648 KTTPVSELVWSPHKGLSLKCADCSLSDKK 734
            T P+SELVWSPHKGLSLKCA+ S  +K+
Sbjct: 120 ATDPLSELVWSPHKGLSLKCAENSTDEKR 148


>ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|222852393|gb|EEE89940.1|
           predicted protein [Populus trichocarpa]
          Length = 970

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 36/65 (55%), Positives = 47/65 (72%)
 Frame = +3

Query: 540 ELGLSLDPANVCTQPEMQTDTGAGANANSRDEMVFLKTTPVSELVWSPHKGLSLKCADCS 719
           +LG SL  +N C Q  ++ D+GAGANA S  +M F+ T  +SELVWSP KGLSLKCAD +
Sbjct: 13  DLGFSLGYSNQCIQRRLKNDSGAGANAASSVDMTFVATNALSELVWSPKKGLSLKCADGT 72

Query: 720 LSDKK 734
            S++K
Sbjct: 73  FSNQK 77


>ref|XP_003610789.1| hypothetical protein MTR_5g007040 [Medicago truncatula]
           gi|355512124|gb|AES93747.1| hypothetical protein
           MTR_5g007040 [Medicago truncatula]
          Length = 845

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = +3

Query: 537 TELGLSLDPANVCTQPEMQTDTGAGANANSRDEMVFLKTTPVSELVWSPHKGLSLKCADC 716
           T+  L L+ AN C    ++ D+ AGANA SR +M    T P+SELVWS  KGLSLKCAD 
Sbjct: 13  TDSELFLNNANQCDWKNLKNDSCAGANAASRADMTLATTDPLSELVWSSDKGLSLKCADS 72

Query: 717 SLSDKKT 737
           S +DK +
Sbjct: 73  SFADKNS 79


Top