BLASTX nr result

ID: Coptis23_contig00004731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004731
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein ...   199   3e-49
ref|XP_004136194.1| PREDICTED: uncharacterized membrane protein ...   192   3e-47
ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|1...   191   1e-46
ref|XP_003517027.1| PREDICTED: uncharacterized membrane protein ...   190   2e-46
ref|NP_001239635.1| uncharacterized protein LOC100793859 [Glycin...   190   2e-46

>ref|XP_002278896.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
           vinifera]
          Length = 254

 Score =  199 bits (507), Expect = 3e-49
 Identities = 98/124 (79%), Positives = 104/124 (83%)
 Frame = +1

Query: 253 NNNNMFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRDHLED 432
           N    FPL+FWE                CVYLTMPASDYSFLKLPR+LED+QILRDHLED
Sbjct: 12  NVEGRFPLTFWEVTGASAVVGAFVLGLACVYLTMPASDYSFLKLPRSLEDIQILRDHLED 71

Query: 433 YTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCY 612
           YTSDYT+QVLVGYC+VYIFMQTFMIPGTVFMSLLAG+LFGVFKGVALVVFTATAGASSCY
Sbjct: 72  YTSDYTVQVLVGYCMVYIFMQTFMIPGTVFMSLLAGSLFGVFKGVALVVFTATAGASSCY 131

Query: 613 FLSK 624
           FLSK
Sbjct: 132 FLSK 135


>ref|XP_004136194.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis
           sativus] gi|449516573|ref|XP_004165321.1| PREDICTED:
           uncharacterized membrane protein At4g09580-like [Cucumis
           sativus]
          Length = 253

 Score =  192 bits (489), Expect = 3e-47
 Identities = 96/119 (80%), Positives = 100/119 (84%)
 Frame = +1

Query: 268 FPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRDHLEDYTSDY 447
           F +SFWE                CVYLTMPASDYSFLKLPR L+DLQILRDHLE+YTSDY
Sbjct: 16  FQVSFWEVGVFTTVVFAFLSGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDY 75

Query: 448 TIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSK 624
           T QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSK
Sbjct: 76  TAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSK 134


>ref|XP_002304343.1| predicted protein [Populus trichocarpa] gi|118488236|gb|ABK95937.1|
           unknown [Populus trichocarpa]
           gi|222841775|gb|EEE79322.1| predicted protein [Populus
           trichocarpa]
          Length = 249

 Score =  191 bits (484), Expect = 1e-46
 Identities = 98/124 (79%), Positives = 100/124 (80%)
 Frame = +1

Query: 253 NNNNMFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSFLKLPRTLEDLQILRDHLED 432
           N  + FPLSFWE                 VYLTMPASDYSFLKLPRTLEDLQILRDHLE 
Sbjct: 7   NVGSRFPLSFWEVGAASSVVLGFVLCLLGVYLTMPASDYSFLKLPRTLEDLQILRDHLET 66

Query: 433 YTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCY 612
           YT DYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGV KGVALVVFTATAGASSCY
Sbjct: 67  YTIDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVLKGVALVVFTATAGASSCY 126

Query: 613 FLSK 624
           FLSK
Sbjct: 127 FLSK 130


>ref|XP_003517027.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Glycine
           max]
          Length = 288

 Score =  190 bits (483), Expect = 2e-46
 Identities = 102/150 (68%), Positives = 112/150 (74%), Gaps = 1/150 (0%)
 Frame = +1

Query: 178 LKKRRRMGKRAEID-VDSSRTYVGPTNNNNMFPLSFWEXXXXXXXXXXXXXXXXCVYLTM 354
           L   +R GK  E + V++      P  + + FPLSFWE                 VYLTM
Sbjct: 20  LSLEKRGGKYMENEGVNTVVVEQQPVASTSKFPLSFWETTVASTVALVFAVGLLGVYLTM 79

Query: 355 PASDYSFLKLPRTLEDLQILRDHLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLL 534
           P SDYSFLKLPRTL+DLQ+LRD+LE YTSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLL
Sbjct: 80  PDSDYSFLKLPRTLQDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLL 139

Query: 535 AGALFGVFKGVALVVFTATAGASSCYFLSK 624
           AGALFGVFKGVALVVFTATAGASSCYFLSK
Sbjct: 140 AGALFGVFKGVALVVFTATAGASSCYFLSK 169


>ref|NP_001239635.1| uncharacterized protein LOC100793859 [Glycine max]
           gi|255645945|gb|ACU23461.1| unknown [Glycine max]
          Length = 258

 Score =  190 bits (483), Expect = 2e-46
 Identities = 103/143 (72%), Positives = 109/143 (76%)
 Frame = +1

Query: 196 MGKRAEIDVDSSRTYVGPTNNNNMFPLSFWEXXXXXXXXXXXXXXXXCVYLTMPASDYSF 375
           MGK+    V+     V PT +   FPLSFWE                 VYLTMP SDYSF
Sbjct: 1   MGKQGLNTVEQQS--VAPTASK--FPLSFWEATVASTVALVFAVGLLGVYLTMPDSDYSF 56

Query: 376 LKLPRTLEDLQILRDHLEDYTSDYTIQVLVGYCLVYIFMQTFMIPGTVFMSLLAGALFGV 555
           LKLPRTLEDLQ+LRD+LE YTSDYT QVLVGYC+VYIFMQTFMIPGTVFMSLLAGALFGV
Sbjct: 57  LKLPRTLEDLQLLRDNLESYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGV 116

Query: 556 FKGVALVVFTATAGASSCYFLSK 624
           FKGVALVVFTATAGASSCYFLSK
Sbjct: 117 FKGVALVVFTATAGASSCYFLSK 139


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