BLASTX nr result

ID: Coptis23_contig00004730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004730
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273672.2| PREDICTED: uncharacterized protein LOC100257...   186   6e-45
ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|2...   186   8e-45
ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycin...   182   2e-43
ref|XP_003546197.1| PREDICTED: uncharacterized protein LOC100776...   181   2e-43
ref|XP_002323124.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43

>ref|XP_002273672.2| PREDICTED: uncharacterized protein LOC100257542 [Vitis vinifera]
           gi|297735874|emb|CBI18633.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  186 bits (473), Expect = 6e-45
 Identities = 99/162 (61%), Positives = 117/162 (72%), Gaps = 2/162 (1%)
 Frame = +2

Query: 272 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 451
           IVLKV MHCEACARKV R+L+ F+GVEDV TD K+  V+VKGKTADPIKVCERIQKKSGR
Sbjct: 37  IVLKVDMHCEACARKVARALKGFQGVEDVTTDSKASKVVVKGKTADPIKVCERIQKKSGR 96

Query: 452 KVEIISPL--XXXXXXXXXXXXXXXXXXXXXXXVITLVLKINMHCEACCQVLQKRIRKID 625
           KVE+ISPL                         VIT VLK+ MHCEAC QVLQ+RIRK  
Sbjct: 97  KVELISPLPKPPEENKEEPKEAKEEEKKEEPPPVITAVLKVYMHCEACAQVLQRRIRKFP 156

Query: 626 GVESVETDLMNNQVVVKGILDPTTVVESVCKKTRKQAFVVPQ 751
           GVESV TD+ N+Q +VKGI++P  +V+ V KKTRKQA++V +
Sbjct: 157 GVESVTTDVANDQAIVKGIIEPAKLVDYVNKKTRKQAYIVKE 198



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 31/41 (75%), Positives = 35/41 (85%), Gaps = 1/41 (2%)
 Frame = +1

Query: 892  EGDSKTDVKKSEYWPPKYYIEYA-YPPEIFSDENPNACSVM 1011
            E D KTDVK+SEYWP K Y+E+A YPP+ FSDENPNACSVM
Sbjct: 227  EDDKKTDVKRSEYWPTKDYLEFASYPPQYFSDENPNACSVM 267


>ref|XP_002308765.1| predicted protein [Populus trichocarpa] gi|222854741|gb|EEE92288.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  186 bits (472), Expect = 8e-45
 Identities = 97/161 (60%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
 Frame = +2

Query: 272 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 451
           IVLKV MHCEACARKV R+L+ FEGVE+V TD K+  V+VKGK ADP KVCER+QKKSGR
Sbjct: 31  IVLKVDMHCEACARKVARALKGFEGVEEVSTDSKASKVVVKGKAADPSKVCERLQKKSGR 90

Query: 452 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXVITLVLKINMHCEACCQVLQKRIRKI 622
           KVE+ISPL                          V+T+VL + MHCEAC QVLQKR+RKI
Sbjct: 91  KVELISPLPKPPEEKKEEAKDPPKEEEKKDEPPPVVTVVLNVRMHCEACAQVLQKRVRKI 150

Query: 623 DGVESVETDLMNNQVVVKGILDPTTVVESVCKKTRKQAFVV 745
            GVESVET+L N+QV+VKG++DP+ +V+ V KKTRKQA +V
Sbjct: 151 QGVESVETNLANDQVIVKGVVDPSKLVDDVYKKTRKQASIV 191



 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +1

Query: 892  EGDSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACSVM 1011
            E D   D+K+SEYWP KYY E+AY P+IFSDENPNACSVM
Sbjct: 222  EDDKNLDIKRSEYWPSKYYSEFAYAPQIFSDENPNACSVM 261


>ref|NP_001238056.1| uncharacterized protein LOC100527827 [Glycine max]
           gi|255633318|gb|ACU17016.1| unknown [Glycine max]
          Length = 262

 Score =  182 bits (461), Expect = 2e-43
 Identities = 93/161 (57%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
 Frame = +2

Query: 272 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 451
           IVLKV MHCEACARKV ++L+ F+GVE+V  D ++  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31  IVLKVDMHCEACARKVAKALKGFQGVEEVSADSRTSKVVVKGKAADPIKVCERLQKKSGK 90

Query: 452 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXVITLVLKINMHCEACCQVLQKRIRKI 622
           KVE+ISPL                          V+T+VLK+ MHCEAC QV+QKRIRKI
Sbjct: 91  KVELISPLPKPPEEKEEPPKEEPPKEEKKYEPPPVVTVVLKVRMHCEACAQVIQKRIRKI 150

Query: 623 DGVESVETDLMNNQVVVKGILDPTTVVESVCKKTRKQAFVV 745
            GVESVETDL N+QV+VKG++DP  +V+ V K+T+KQA +V
Sbjct: 151 KGVESVETDLANDQVIVKGVVDPAKLVDHVYKRTKKQASIV 191



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = +1

Query: 898  DSKTDVKKSEYWPPKYYIEYAYPPEIFSDENPNACSVM 1011
            D+KT++K+SEYWP K YI+YAY PEIFSDENPNACSVM
Sbjct: 225  DNKTEIKRSEYWPSKNYIDYAYDPEIFSDENPNACSVM 262


>ref|XP_003546197.1| PREDICTED: uncharacterized protein LOC100776967 [Glycine max]
          Length = 267

 Score =  181 bits (460), Expect = 2e-43
 Identities = 94/163 (57%), Positives = 117/163 (71%), Gaps = 3/163 (1%)
 Frame = +2

Query: 272 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 451
           IVLKV MHCEACARKV ++L+ FEGVE+V  D K+  V+VKGK ADPIKVCER+QKKSG+
Sbjct: 31  IVLKVDMHCEACARKVAKALKGFEGVEEVTADSKASKVVVKGKAADPIKVCERLQKKSGK 90

Query: 452 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXVITLVLKINMHCEACCQVLQKRIRKI 622
           KVE+ISPL                          V+T+VLK+ MHCEAC QV+QKRIRKI
Sbjct: 91  KVELISPLPKPPEEKKEEIKEEPQPEEKKEEPPPVVTVVLKVRMHCEACAQVIQKRIRKI 150

Query: 623 DGVESVETDLMNNQVVVKGILDPTTVVESVCKKTRKQAFVVPQ 751
            GVESVET L N+QV+VKG++DP  +V+ V K+T+KQA +V +
Sbjct: 151 QGVESVETSLGNDQVIVKGVIDPAKLVDYVYKRTKKQASIVKE 193



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 3/44 (6%)
 Frame = +1

Query: 889  EEGDSKTDVKKSEYWPPKYYIEYA---YPPEIFSDENPNACSVM 1011
            EEGD+KTD+K+SEYWP + Y++Y    Y P+IFSDENPNAC+VM
Sbjct: 224  EEGDTKTDIKRSEYWPLRSYVDYVDYPYAPQIFSDENPNACTVM 267


>ref|XP_002323124.1| predicted protein [Populus trichocarpa] gi|222867754|gb|EEF04885.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  181 bits (460), Expect = 2e-43
 Identities = 96/161 (59%), Positives = 115/161 (71%), Gaps = 3/161 (1%)
 Frame = +2

Query: 272 IVLKVYMHCEACARKVERSLRRFEGVEDVKTDHKSHIVLVKGKTADPIKVCERIQKKSGR 451
           IVLKV MHCEACARKV R+L+ FEGVE+V TD K+  V+VKGK ADPIKVCER++KK+GR
Sbjct: 31  IVLKVDMHCEACARKVARALKGFEGVEEVTTDSKASKVVVKGKKADPIKVCERLRKKNGR 90

Query: 452 KVEIISPL---XXXXXXXXXXXXXXXXXXXXXXXVITLVLKINMHCEACCQVLQKRIRKI 622
           KVE+ISPL                          V+T+VL + MHCEAC Q LQKRIRKI
Sbjct: 91  KVELISPLPKPPEENKEENKDPPKEEEKKDEPPPVVTVVLNVRMHCEACAQSLQKRIRKI 150

Query: 623 DGVESVETDLMNNQVVVKGILDPTTVVESVCKKTRKQAFVV 745
            GVESVETDL N QV+VKG++DP+ +V+ V KKT KQA +V
Sbjct: 151 KGVESVETDLANGQVIVKGVVDPSKLVDDVYKKTGKQASIV 191



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +1

Query: 889  EEGDSKTDVKKSEYWPPKYYIE-YAYPPEIFSDENPNACSVM 1011
            E  D K D+KKSEYWP KYY + YAY PE FSDENPNACS+M
Sbjct: 226  EGDDKKPDIKKSEYWPSKYYSDQYAYAPEFFSDENPNACSIM 267


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