BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004716
         (1842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vi...   450   e-124
emb|CBI34603.3| unnamed protein product [Vitis vinifera]              446   e-123
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   442   e-121
ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800...   441   e-121
ref|XP_002518926.1| RNA-binding protein, putative [Ricinus commu...   439   e-120

>ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
          Length = 398

 Score =  450 bits (1157), Expect = e-124
 Identities = 232/297 (78%), Positives = 252/297 (84%)
 Frame = -2

Query: 1364 SQQRNGGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNSHISAGAFYANNFL 1185
            +Q R+ G  +  N     DMREL+EL SKLNPMAEEFVPPSL NN  +   G FY+N   
Sbjct: 116  AQHRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLANNGLN---GGFYSNGS- 171

Query: 1184 MFNHHNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDID 1005
                HN    G V    NG    RRKKNN+ QGKRR+NSRTS+AQRE++IRRTVYVSDID
Sbjct: 172  --ETHNNTRNGQV----NG----RRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDID 221

Query: 1004 HQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPV 825
             QVTEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPV
Sbjct: 222  QQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPV 281

Query: 824  RVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLR 645
            RVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVSQADVKLFFES+CG VYRLR
Sbjct: 282  RVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLR 341

Query: 644  LLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 474
            LLGDYHHSTRIAFVEFIMAESAIAALNCSGV+LGSLPIRVSPSKTPVRPRAPR  +H
Sbjct: 342  LLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398


>emb|CBI34603.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  446 bits (1148), Expect = e-123
 Identities = 230/297 (77%), Positives = 251/297 (84%)
 Frame = -2

Query: 1364 SQQRNGGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNSHISAGAFYANNFL 1185
            +Q R+ G  +  N     DMREL+EL SKLNPMAEEFVPPSL NN  +   G FY+N   
Sbjct: 116  AQHRSNGGHLQRNGDSGVDMRELQELFSKLNPMAEEFVPPSLANNGLN---GGFYSNGS- 171

Query: 1184 MFNHHNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDID 1005
                HN    G V    NG     R+KNN+ QGKRR+NSRTS+AQRE++IRRTVYVSDID
Sbjct: 172  --ETHNNTRNGQV----NG-----RRKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDID 220

Query: 1004 HQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPV 825
             QVTEE+LAALF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPV
Sbjct: 221  QQVTEEKLAALFITCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPV 280

Query: 824  RVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLR 645
            RVLPSKTAIAPVNPTFLPR+EDEREMCARTIYCTNIDKKVSQADVKLFFES+CG VYRLR
Sbjct: 281  RVLPSKTAIAPVNPTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLR 340

Query: 644  LLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 474
            LLGDYHHSTRIAFVEFIMAESAIAALNCSGV+LGSLPIRVSPSKTPVRPRAPR  +H
Sbjct: 341  LLGDYHHSTRIAFVEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
            gi|302143972|emb|CBI23077.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  442 bits (1136), Expect = e-121
 Identities = 227/280 (81%), Positives = 247/280 (88%), Gaps = 1/280 (0%)
 Frame = -2

Query: 1310 DMRELEELLSKLNPMAEEFVPPSLTNNNSHISAGAF-YANNFLMFNHHNIHETGAVLDIP 1134
            D+R+LE+LLSKLNPMAEEFVPPSL N +   +  AF Y NNF++          A     
Sbjct: 93   DIRDLEDLLSKLNPMAEEFVPPSLANGHGWSAGAAFGYTNNFVL---------QANFGNA 143

Query: 1133 NGHGPPRRKKNNYNQGKRRINSRTSIAQREDVIRRTVYVSDIDHQVTEEQLAALFVNCGQ 954
            NG+   RRK+NNYNQ KRRINSRTS+AQRE+VI+RTVYVSDID QVTEE LAALF+NCGQ
Sbjct: 144  NGNAG-RRKRNNYNQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQ 201

Query: 953  VVDCRICGDPNSVLRFAFIEFTDEEGARASLSLAGTMLGYYPVRVLPSKTAIAPVNPTFL 774
            VVDCRICGDPNSVLRFAF+EFTDEEGARA+LSLAGTMLGYYPVRVLPSKTAIAPVNPTFL
Sbjct: 202  VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFL 261

Query: 773  PRSEDEREMCARTIYCTNIDKKVSQADVKLFFESICGAVYRLRLLGDYHHSTRIAFVEFI 594
            PRSEDEREMCARTIYCTNIDKKV+QA+VKLFFESICG V+RLRLLGDYHHSTRIAFVEF+
Sbjct: 262  PRSEDEREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFV 321

Query: 593  MAESAIAALNCSGVILGSLPIRVSPSKTPVRPRAPRPHMH 474
            MAESAIAALNCSG ILGSLPIRVSPSKTPVRPRAPRP +H
Sbjct: 322  MAESAIAALNCSGAILGSLPIRVSPSKTPVRPRAPRPALH 361


>ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
          Length = 369

 Score =  441 bits (1133), Expect = e-121
 Identities = 224/309 (72%), Positives = 254/309 (82%), Gaps = 3/309 (0%)
 Frame = -2

Query: 1391 NSGFHHRSNSQQRNGGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNSHIS- 1215
            N G+       + NGGE       FKRDMR+LEELLSKLNPMAEEFVPPSL N +  ++ 
Sbjct: 76   NDGYGMNGVMSEENGGE------SFKRDMRDLEELLSKLNPMAEEFVPPSLANTHGLLAG 129

Query: 1214 --AGAFYANNFLMFNHHNIHETGAVLDIPNGHGPPRRKKNNYNQGKRRINSRTSIAQRED 1041
              AG  Y NNF++ N++            NG    RR+KN YN GKRR+N +  + +RE+
Sbjct: 130  PNAGFGYTNNFILPNNYGN---------TNGQTNNRRRKNGYNPGKRRMNHKMDMEKREE 180

Query: 1040 VIRRTVYVSDIDHQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASL 861
            +IRRTVYVSDID  VTEEQLAALF+NCGQVVDCR+CGDPNS+LRFAFIEFTD+EGARA+L
Sbjct: 181  MIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTDDEGARAAL 240

Query: 860  SLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLF 681
            SL+GTMLGYYP+RVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKK++QADVK F
Sbjct: 241  SLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 300

Query: 680  FESICGAVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVR 501
            FESICG V+RLRLLGDYHHSTRIAFVEF +AESAIAAL+CSGVILGSLPIRVSPSKTPVR
Sbjct: 301  FESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVILGSLPIRVSPSKTPVR 360

Query: 500  PRAPRPHMH 474
            PRAPRP MH
Sbjct: 361  PRAPRPPMH 369


>ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
            gi|223541913|gb|EEF43459.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 379

 Score =  439 bits (1128), Expect = e-120
 Identities = 228/308 (74%), Positives = 256/308 (83%), Gaps = 7/308 (2%)
 Frame = -2

Query: 1376 HRSNSQQRNGGEMVVNNNGFKRDMRELEELLSKLNPMAEEFVPPSLTNNNSHISAGAFYA 1197
            H  + +   GG++       +RD+REL+EL SKLNPMAEEFVPPSL NN   IS    + 
Sbjct: 81   HHHHQRSSGGGDL-------QRDIRELQELFSKLNPMAEEFVPPSLANNK--ISNNYIHG 131

Query: 1196 NNFL---MFNHHNIHETGAVLDIP--NG--HGPPRRKKNNYNQGKRRINSRTSIAQREDV 1038
             N L    + ++N ++   +L     NG  +G   R+K NYNQGKRR+NSRTS+AQRE++
Sbjct: 132  LNGLNVGFYTNNNNYDPAFMLTNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEI 191

Query: 1037 IRRTVYVSDIDHQVTEEQLAALFVNCGQVVDCRICGDPNSVLRFAFIEFTDEEGARASLS 858
            IRRTVYVSDID QVTEEQLAALFV CGQVVDCRICGDPNSVLRFAFIEFT EEGARA+L+
Sbjct: 192  IRRTVYVSDIDQQVTEEQLAALFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALN 251

Query: 857  LAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFF 678
            LAGT+LGYYPVRVLPSKTAIAPVNPTFLPRS+DEREMC RTIYCTNIDKKV+QADVKLFF
Sbjct: 252  LAGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFF 311

Query: 677  ESICGAVYRLRLLGDYHHSTRIAFVEFIMAESAIAALNCSGVILGSLPIRVSPSKTPVRP 498
            ES+CG VYRLRLLGDYHHSTRIAFVEF+MAESAIAALNCSGV+LGSLPIRVSPSKTPVRP
Sbjct: 312  ESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRP 371

Query: 497  RAPRPHMH 474
            RAPR  MH
Sbjct: 372  RAPRIPMH 379