BLASTX nr result

ID: Coptis23_contig00004710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004710
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20154.3| unnamed protein product [Vitis vinifera]              109   2e-22
emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]   109   2e-22
ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...    97   1e-18
ref|XP_003628439.1| Leucine-rich repeat family protein / protein...    97   2e-18
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic...    96   2e-18

>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = -2

Query: 285 AGGVGKRIIKEYNASVTGSTLEIHLYWAGKGTIAVPQRGIYGPLISAISVKPNFDTSTGL 106
           A GVGK I K++  SV GSTLEIHLYWAGKGT A+P RG+YGPLISAI+V PNFD STGL
Sbjct: 705 AKGVGKAITKDFETSVNGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGL 764

Query: 105 SAGSIAGI 82
           SAG+IAGI
Sbjct: 765 SAGAIAGI 772


>emb|CAN81779.1| hypothetical protein VITISV_034284 [Vitis vinifera]
          Length = 970

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/68 (76%), Positives = 58/68 (85%)
 Frame = -2

Query: 285 AGGVGKRIIKEYNASVTGSTLEIHLYWAGKGTIAVPQRGIYGPLISAISVKPNFDTSTGL 106
           A GVGK I K++  SV GSTLEIHLYWAGKGT A+P RG+YGPLISAI+V PNFD STGL
Sbjct: 494 AKGVGKAITKDFETSVNGSTLEIHLYWAGKGTNAIPSRGVYGPLISAITVTPNFDVSTGL 553

Query: 105 SAGSIAGI 82
           SAG+IAGI
Sbjct: 554 SAGAIAGI 561


>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/70 (71%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
 Frame = -2

Query: 285 AGGVGKR-IIKEYNASVTGSTLEIHLYWAGKGTIAVPQRGIYGPLISAISVKPNFDTSTG 109
           AGGVGK  I++E N  V GSTLEIHLYWAGKGT A+P RG+YGPLIS I+V PNFD   G
Sbjct: 540 AGGVGKTFILEESNILVNGSTLEIHLYWAGKGTTAIPDRGVYGPLISGITVTPNFDVEPG 599

Query: 108 -LSAGSIAGI 82
            LSAG+IAGI
Sbjct: 600 TLSAGAIAGI 609


>ref|XP_003628439.1| Leucine-rich repeat family protein / protein kinase family protein
           [Medicago truncatula] gi|355522461|gb|AET02915.1|
           Leucine-rich repeat family protein / protein kinase
           family protein [Medicago truncatula]
          Length = 1031

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -2

Query: 285 AGGVGKRIIKEYNASVTGSTLEIHLYWAGKGTIAVPQRGIYGPLISAISVKPNF-DTSTG 109
           AGGVGK I KE++  V  +TLEIHLYWAGKGT A+P RG+YGPLISAI++ PNF + S G
Sbjct: 545 AGGVGKGITKEFDVEVNDTTLEIHLYWAGKGTTAIPDRGVYGPLISAITITPNFKNHSEG 604

Query: 108 LSAGSIAGI 82
           LSAG I GI
Sbjct: 605 LSAGVIVGI 613


>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
           gi|355485310|gb|AES66513.1| Receptor-like
           serine/threonine kinase [Medicago truncatula]
          Length = 1011

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/69 (69%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
 Frame = -2

Query: 285 AGGVGKRIIKEYNASVTGSTLEIHLYWAGKGTIAVPQRGIYGPLISAISVKPNFD-TSTG 109
           AGGVGK I +++N  V  STLEIHL WAGKGT A+P RG+YGPLISAI+V PNF   S G
Sbjct: 547 AGGVGKGITRDFNVDVNDSTLEIHLSWAGKGTNAIPMRGVYGPLISAITVTPNFKIPSNG 606

Query: 108 LSAGSIAGI 82
           LSAG+IAGI
Sbjct: 607 LSAGAIAGI 615


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