BLASTX nr result

ID: Coptis23_contig00004708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004708
         (1433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274500.1| PREDICTED: ABC transporter I family member 1...   204   6e-88
ref|XP_004138625.1| PREDICTED: ABC transporter I family member 1...   203   7e-87
ref|XP_003622165.1| ABC transporter I family member [Medicago tr...   204   1e-85
ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|2...   190   4e-84
ref|XP_003553946.1| PREDICTED: ABC transporter I family member 1...   197   2e-82

>ref|XP_002274500.1| PREDICTED: ABC transporter I family member 11, chloroplastic [Vitis
           vinifera] gi|296082322|emb|CBI21327.3| unnamed protein
           product [Vitis vinifera]
          Length = 284

 Score =  204 bits (519), Expect(2) = 6e-88
 Identities = 102/148 (68%), Positives = 120/148 (81%)
 Frame = +3

Query: 99  RFNFANPRALNITSDYSCFQVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRSGSGKT 278
           R  F   R L I+ +YSC +V+GVSYRP GT+ +LL+DV+FSL EKS GLIFGRSGSGKT
Sbjct: 39  RSKFWRIRNLRISCEYSCIEVRGVSYRPQGTEFDLLNDVNFSLPEKSFGLIFGRSGSGKT 98

Query: 279 TLLQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEV 458
           TLLQLLAG++KPTSG+I +Q+YG+DGK  Q    LP ERVGI+FQFPERYF+AD VLEEV
Sbjct: 99  TLLQLLAGINKPTSGSIFVQKYGDDGKLTQTSEPLPSERVGILFQFPERYFVADNVLEEV 158

Query: 459 TFGWPRQRENIHLKEQLASGLQRAINSV 542
           TFGWPRQR +  LKE LA GL+RAIN V
Sbjct: 159 TFGWPRQRGSFQLKEHLALGLERAINWV 186



 Score =  148 bits (373), Expect(2) = 6e-88
 Identities = 74/97 (76%), Positives = 81/97 (83%)
 Frame = +2

Query: 608 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 787
           VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 186 VGLNGISLDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVELLKHL 245

Query: 788 XXXXXXXVVSHDLKELSCLVDQSWRMEMGGFLKKEPM 898
                  VVSHDLKEL+ LVD+SWRMEMGG LK+EP+
Sbjct: 246 KKELTILVVSHDLKELAALVDRSWRMEMGGVLKEEPI 282


>ref|XP_004138625.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
           [Cucumis sativus]
          Length = 274

 Score =  203 bits (517), Expect(2) = 7e-87
 Identities = 101/146 (69%), Positives = 119/146 (81%)
 Frame = +3

Query: 105 NFANPRALNITSDYSCFQVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRSGSGKTTL 284
           N     AL + S+YSCF+V+ +SYRPPGT+H+LL+ V+FSL EKS GLIFG+SGSGKTTL
Sbjct: 31  NSRRTNALTLKSNYSCFEVRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTL 90

Query: 285 LQLLAGLSKPTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTF 464
           LQLLAGLSKPTSG+I +Q+Y +DGKP Q+   L PERVGIVFQFPERYF+ D+VL EVTF
Sbjct: 91  LQLLAGLSKPTSGSICVQKYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTF 150

Query: 465 GWPRQRENIHLKEQLASGLQRAINSV 542
           GWPRQR +  LKE LA  LQRAIN V
Sbjct: 151 GWPRQRSDSDLKENLALRLQRAINWV 176



 Score =  145 bits (366), Expect(2) = 7e-87
 Identities = 71/99 (71%), Positives = 80/99 (80%)
 Frame = +2

Query: 608 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 787
           VGLNGI+LD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKAR DVV      
Sbjct: 176 VGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDVVKLLKNL 235

Query: 788 XXXXXXXVVSHDLKELSCLVDQSWRMEMGGFLKKEPMPI 904
                  +VSHDLKE + LVD SWRMEMGG L++EP+PI
Sbjct: 236 KKELTVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 274


>ref|XP_003622165.1| ABC transporter I family member [Medicago truncatula]
           gi|355497180|gb|AES78383.1| ABC transporter I family
           member [Medicago truncatula]
          Length = 280

 Score =  204 bits (519), Expect(2) = 1e-85
 Identities = 111/176 (63%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
 Frame = +3

Query: 21  SSSTFLSFAPPLNSLTTSLSIFPK--IKRFNFANPRALNITSDYSCFQVKGVSYRPPGTQ 194
           S  TF    PPL+S   SLS  P+     FN +  R       YS  +V+ VSY+PPGT+
Sbjct: 13  SPITFHFLKPPLSSFP-SLSRSPQSHCSFFNSSTTRC-----SYSSLEVRDVSYQPPGTE 66

Query: 195 HNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQRYGEDGKPNQAP 374
             LL+ V+FSL EKSLGLIFG+SGSGKTTLLQLLAG++KPTSG+I+IQ+YG+DG P+Q+P
Sbjct: 67  FKLLNSVNFSLPEKSLGLIFGQSGSGKTTLLQLLAGINKPTSGSIHIQKYGDDGSPSQSP 126

Query: 375 IQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASGLQRAINSV 542
             L PERVGIVFQFPERYF+ADTVL+EVTFGWPRQ+ N  L+E LA GLQRAIN V
Sbjct: 127 EPLVPERVGIVFQFPERYFVADTVLDEVTFGWPRQKGNDQLRENLALGLQRAINWV 182



 Score =  140 bits (353), Expect(2) = 1e-85
 Identities = 70/99 (70%), Positives = 81/99 (81%)
 Frame = +2

Query: 608 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 787
           VGL+GISLD++PH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 182 VGLSGISLDKNPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARADVVKLLKHL 241

Query: 788 XXXXXXXVVSHDLKELSCLVDQSWRMEMGGFLKKEPMPI 904
                  VVSHDL+E + LVDQSWRMEMGG L++E +P+
Sbjct: 242 KKELTVLVVSHDLREFASLVDQSWRMEMGGNLRQEFLPL 280


>ref|XP_002328881.1| predicted protein [Populus trichocarpa] gi|222839311|gb|EEE77648.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  190 bits (483), Expect(2) = 4e-84
 Identities = 91/128 (71%), Positives = 109/128 (85%)
 Frame = +3

Query: 159 VKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSKPTSGTINIQ 338
           VK VSYRPPGT+ NLL+ V FSL E+S GLIFG+SGSGKTTLLQLL+G+SKPTSG+I +Q
Sbjct: 9   VKDVSYRPPGTELNLLNKVTFSLPERSFGLIFGQSGSGKTTLLQLLSGISKPTSGSICVQ 68

Query: 339 RYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENIHLKEQLASG 518
           RYG DG PNQ P QL PE+VGIVFQFPERYF+ADT+ +EVTFGWPR++ ++ L+E LA  
Sbjct: 69  RYGNDGNPNQLPEQLSPEKVGIVFQFPERYFVADTIADEVTFGWPRRKSSVQLREHLALN 128

Query: 519 LQRAINSV 542
           LQRA+N V
Sbjct: 129 LQRAVNWV 136



 Score =  149 bits (376), Expect(2) = 4e-84
 Identities = 74/99 (74%), Positives = 82/99 (82%)
 Frame = +2

Query: 608 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 787
           VGLNGISLD+DPH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 136 VGLNGISLDKDPHSLSGGYKRRLALAIQLVEVPDLLILDEPLAGLDWKARADVVKLLKHL 195

Query: 788 XXXXXXXVVSHDLKELSCLVDQSWRMEMGGFLKKEPMPI 904
                  VVSHDLKEL+ LVD SWRMEMGGFL++E +P+
Sbjct: 196 KKELTILVVSHDLKELAALVDHSWRMEMGGFLREELLPV 234


>ref|XP_003553946.1| PREDICTED: ABC transporter I family member 11, chloroplastic-like
           [Glycine max]
          Length = 272

 Score =  197 bits (502), Expect(2) = 2e-82
 Identities = 99/137 (72%), Positives = 113/137 (82%)
 Frame = +3

Query: 132 ITSDYSCFQVKGVSYRPPGTQHNLLSDVHFSLHEKSLGLIFGRSGSGKTTLLQLLAGLSK 311
           I S+YS F+V+ V+Y+PPGTQ  LL+ V FSL EKS GLIFG+SGSGKTTLLQLLAG+SK
Sbjct: 38  INSNYSSFEVRDVTYQPPGTQLRLLNSVSFSLPEKSFGLIFGQSGSGKTTLLQLLAGISK 97

Query: 312 PTSGTINIQRYGEDGKPNQAPIQLPPERVGIVFQFPERYFLADTVLEEVTFGWPRQRENI 491
           PTSG+I IQ Y  DG P+Q P  L PERVGIVFQFPERYF+AD VL+EVTFGWPRQ+ N 
Sbjct: 98  PTSGSIYIQEYESDGNPSQPPEPLVPERVGIVFQFPERYFVADNVLDEVTFGWPRQKGNH 157

Query: 492 HLKEQLASGLQRAINSV 542
           HL+E LA GLQRAIN V
Sbjct: 158 HLRENLALGLQRAINWV 174



 Score =  136 bits (342), Expect(2) = 2e-82
 Identities = 68/99 (68%), Positives = 81/99 (81%)
 Frame = +2

Query: 608 VGLNGISLDEDPHALSGGYKRRLALAIQLVKFPDLLILDEPLAGLDWKARADVVXXXXXX 787
           VGL+GISL+++PH+LSGGYKRRLALAIQLV+ PDLLILDEPLAGLDWKARADVV      
Sbjct: 174 VGLSGISLNKNPHSLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVVKLLKHL 233

Query: 788 XXXXXXXVVSHDLKELSCLVDQSWRMEMGGFLKKEPMPI 904
                  VVSHDL+E + LVD+SWRMEMGG L++E +P+
Sbjct: 234 KKELTVLVVSHDLREFASLVDRSWRMEMGGNLREEFLPL 272


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