BLASTX nr result
ID: Coptis23_contig00004704
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00004704 (1017 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation... 139 4e-59 gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Cam... 141 9e-59 gb|ACF06495.1| eukaryotic translation initiation factor 5A isofo... 139 9e-59 gb|AAQ08191.1| eukaryotic translation initiation factor 5A isofo... 137 2e-58 sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation init... 140 3e-58 >ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation factor 5A [Vitis vinifera] gi|147807413|emb|CAN70753.1| hypothetical protein VITISV_014697 [Vitis vinifera] gi|296090571|emb|CBI40934.3| unnamed protein product [Vitis vinifera] Length = 160 Score = 139 bits (349), Expect(2) = 4e-59 Identities = 66/71 (92%), Positives = 67/71 (94%) Frame = +1 Query: 97 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276 MSDEEH F+SKADAGASKTYPQQAG IRKNGYIVIKAR CKVVEVSTSKTGKHGHAKCHF Sbjct: 1 MSDEEHHFDSKADAGASKTYPQQAGAIRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHF 60 Query: 277 VAIDIFNGKKL 309 V IDIFNGKKL Sbjct: 61 VGIDIFNGKKL 71 Score = 116 bits (291), Expect(2) = 4e-59 Identities = 57/61 (93%), Positives = 60/61 (98%) Frame = +3 Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599 DGFVSLLTENG+TKDDLRLPT++ LLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 158 Query: 600 K 602 K Sbjct: 159 K 159 >gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Camellia sinensis] Length = 160 Score = 141 bits (355), Expect(2) = 9e-59 Identities = 68/71 (95%), Positives = 68/71 (95%) Frame = +1 Query: 97 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276 MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60 Query: 277 VAIDIFNGKKL 309 VAIDIFNGKKL Sbjct: 61 VAIDIFNGKKL 71 Score = 113 bits (282), Expect(2) = 9e-59 Identities = 54/61 (88%), Positives = 59/61 (96%) Frame = +3 Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599 DGFVSLLTENG+TKDDLRLPT++ LL+QIKDGF +GKDLVVTVMSAMGEEQICALKDIGP Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDDVLLTQIKDGFGEGKDLVVTVMSAMGEEQICALKDIGP 158 Query: 600 K 602 K Sbjct: 159 K 159 >gb|ACF06495.1| eukaryotic translation initiation factor 5A isoform II [Elaeis guineensis] Length = 159 Score = 139 bits (349), Expect(2) = 9e-59 Identities = 66/71 (92%), Positives = 67/71 (94%) Frame = +1 Query: 97 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276 MSDEEH FESKADAGASKT+PQQAG IRKNGYIVIK RACKVVEVSTSKTGKHGHAKCHF Sbjct: 1 MSDEEHHFESKADAGASKTFPQQAGAIRKNGYIVIKGRACKVVEVSTSKTGKHGHAKCHF 60 Query: 277 VAIDIFNGKKL 309 V IDIFNGKKL Sbjct: 61 VGIDIFNGKKL 71 Score = 115 bits (288), Expect(2) = 9e-59 Identities = 56/61 (91%), Positives = 60/61 (98%) Frame = +3 Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599 DGFVSLLTENG+TKDDLRLPT+E LL+QIKDGFA+GKDLVVTVMSAMGEEQICALKDIGP Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDEPLLTQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGP 158 Query: 600 K 602 K Sbjct: 159 K 159 >gb|AAQ08191.1| eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis] gi|33325119|gb|AAQ08192.1| eukaryotic translation initiation factor 5A isoform II [Hevea brasiliensis] Length = 160 Score = 137 bits (345), Expect(2) = 2e-58 Identities = 66/71 (92%), Positives = 66/71 (92%) Frame = +1 Query: 97 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276 MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60 Query: 277 VAIDIFNGKKL 309 V IDIFN KKL Sbjct: 61 VGIDIFNAKKL 71 Score = 116 bits (290), Expect(2) = 2e-58 Identities = 57/61 (93%), Positives = 60/61 (98%) Frame = +3 Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599 DGFVSLLTENG+TKDDLRLPT+E LLSQIKDGFA+GKDLVVTVMSAMGEEQICALKDIGP Sbjct: 99 DGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGP 158 Query: 600 K 602 K Sbjct: 159 K 159 >sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation initiation factor 5A; Short=eIF-5A gi|6689385|emb|CAB65463.1| translation initiation factor 5A precursor protein (eIF-5A) [Senecio vernalis] Length = 159 Score = 140 bits (354), Expect(2) = 3e-58 Identities = 68/71 (95%), Positives = 69/71 (97%) Frame = +1 Query: 97 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276 MSDEEHQFESKADAGASKTYPQQAGTIRK G+IVIK RACKVVEVSTSKTGKHGHAKCHF Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHF 60 Query: 277 VAIDIFNGKKL 309 VAIDIFNGKKL Sbjct: 61 VAIDIFNGKKL 71 Score = 112 bits (279), Expect(2) = 3e-58 Identities = 53/61 (86%), Positives = 60/61 (98%) Frame = +3 Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599 DGFVSLLTENG+TKDDL+LPT++ALL+QIKDGF +GKDLVV+VMSAMGEEQICALKDIGP Sbjct: 99 DGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGP 158 Query: 600 K 602 K Sbjct: 159 K 159