BLASTX nr result

ID: Coptis23_contig00004704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004704
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation...   139   4e-59
gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Cam...   141   9e-59
gb|ACF06495.1| eukaryotic translation initiation factor 5A isofo...   139   9e-59
gb|AAQ08191.1| eukaryotic translation initiation factor 5A isofo...   137   2e-58
sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation init...   140   3e-58

>ref|XP_002273265.1| PREDICTED: eukaryotic translation initiation factor 5A [Vitis
           vinifera] gi|147807413|emb|CAN70753.1| hypothetical
           protein VITISV_014697 [Vitis vinifera]
           gi|296090571|emb|CBI40934.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  139 bits (349), Expect(2) = 4e-59
 Identities = 66/71 (92%), Positives = 67/71 (94%)
 Frame = +1

Query: 97  MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276
           MSDEEH F+SKADAGASKTYPQQAG IRKNGYIVIKAR CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFDSKADAGASKTYPQQAGAIRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHF 60

Query: 277 VAIDIFNGKKL 309
           V IDIFNGKKL
Sbjct: 61  VGIDIFNGKKL 71



 Score =  116 bits (291), Expect(2) = 4e-59
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = +3

Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599
           DGFVSLLTENG+TKDDLRLPT++ LLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP
Sbjct: 99  DGFVSLLTENGNTKDDLRLPTDDNLLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 158

Query: 600 K 602
           K
Sbjct: 159 K 159


>gb|AET97661.1| eukaryotic translation initiation factor 5A4 [Camellia sinensis]
          Length = 160

 Score =  141 bits (355), Expect(2) = 9e-59
 Identities = 68/71 (95%), Positives = 68/71 (95%)
 Frame = +1

Query: 97  MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 277 VAIDIFNGKKL 309
           VAIDIFNGKKL
Sbjct: 61  VAIDIFNGKKL 71



 Score =  113 bits (282), Expect(2) = 9e-59
 Identities = 54/61 (88%), Positives = 59/61 (96%)
 Frame = +3

Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599
           DGFVSLLTENG+TKDDLRLPT++ LL+QIKDGF +GKDLVVTVMSAMGEEQICALKDIGP
Sbjct: 99  DGFVSLLTENGNTKDDLRLPTDDVLLTQIKDGFGEGKDLVVTVMSAMGEEQICALKDIGP 158

Query: 600 K 602
           K
Sbjct: 159 K 159


>gb|ACF06495.1| eukaryotic translation initiation factor 5A isoform II [Elaeis
           guineensis]
          Length = 159

 Score =  139 bits (349), Expect(2) = 9e-59
 Identities = 66/71 (92%), Positives = 67/71 (94%)
 Frame = +1

Query: 97  MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276
           MSDEEH FESKADAGASKT+PQQAG IRKNGYIVIK RACKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTFPQQAGAIRKNGYIVIKGRACKVVEVSTSKTGKHGHAKCHF 60

Query: 277 VAIDIFNGKKL 309
           V IDIFNGKKL
Sbjct: 61  VGIDIFNGKKL 71



 Score =  115 bits (288), Expect(2) = 9e-59
 Identities = 56/61 (91%), Positives = 60/61 (98%)
 Frame = +3

Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599
           DGFVSLLTENG+TKDDLRLPT+E LL+QIKDGFA+GKDLVVTVMSAMGEEQICALKDIGP
Sbjct: 99  DGFVSLLTENGNTKDDLRLPTDEPLLTQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGP 158

Query: 600 K 602
           K
Sbjct: 159 K 159


>gb|AAQ08191.1| eukaryotic translation initiation factor 5A isoform I [Hevea
           brasiliensis] gi|33325119|gb|AAQ08192.1| eukaryotic
           translation initiation factor 5A isoform II [Hevea
           brasiliensis]
          Length = 160

 Score =  137 bits (345), Expect(2) = 2e-58
 Identities = 66/71 (92%), Positives = 66/71 (92%)
 Frame = +1

Query: 97  MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276
           MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK R CKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHF 60

Query: 277 VAIDIFNGKKL 309
           V IDIFN KKL
Sbjct: 61  VGIDIFNAKKL 71



 Score =  116 bits (290), Expect(2) = 2e-58
 Identities = 57/61 (93%), Positives = 60/61 (98%)
 Frame = +3

Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599
           DGFVSLLTENG+TKDDLRLPT+E LLSQIKDGFA+GKDLVVTVMSAMGEEQICALKDIGP
Sbjct: 99  DGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSAMGEEQICALKDIGP 158

Query: 600 K 602
           K
Sbjct: 159 K 159


>sp|Q9SC12.1|IF5A_SENVE RecName: Full=Eukaryotic translation initiation factor 5A;
           Short=eIF-5A gi|6689385|emb|CAB65463.1| translation
           initiation factor 5A precursor protein (eIF-5A) [Senecio
           vernalis]
          Length = 159

 Score =  140 bits (354), Expect(2) = 3e-58
 Identities = 68/71 (95%), Positives = 69/71 (97%)
 Frame = +1

Query: 97  MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKARACKVVEVSTSKTGKHGHAKCHF 276
           MSDEEHQFESKADAGASKTYPQQAGTIRK G+IVIK RACKVVEVSTSKTGKHGHAKCHF
Sbjct: 1   MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHF 60

Query: 277 VAIDIFNGKKL 309
           VAIDIFNGKKL
Sbjct: 61  VAIDIFNGKKL 71



 Score =  112 bits (279), Expect(2) = 3e-58
 Identities = 53/61 (86%), Positives = 60/61 (98%)
 Frame = +3

Query: 420 DGFVSLLTENGSTKDDLRLPTEEALLSQIKDGFADGKDLVVTVMSAMGEEQICALKDIGP 599
           DGFVSLLTENG+TKDDL+LPT++ALL+QIKDGF +GKDLVV+VMSAMGEEQICALKDIGP
Sbjct: 99  DGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGP 158

Query: 600 K 602
           K
Sbjct: 159 K 159


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