BLASTX nr result

ID: Coptis23_contig00004701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004701
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL27855.1| lipid transfer protein precursor [Davidia involuc...    57   2e-06
gb|ACQ42222.1| lipid transfer protein 1 [Chimonanthus praecox]         55   6e-06
gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]           55   8e-06
emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]         55   8e-06

>gb|AAL27855.1| lipid transfer protein precursor [Davidia involucrata]
          Length = 120

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -2

Query: 387 DRQTACGCLKTAASSAAVVQ-KYASVLPRLCSVNLGYNVDPRIDCSKVR 244
           DRQ AC CLKTA++S A +   YAS LP  C VN+ Y + P  DCSKV+
Sbjct: 72  DRQAACNCLKTASTSIAGINLSYASSLPGKCGVNVPYKISPSTDCSKVQ 120


>gb|ACQ42222.1| lipid transfer protein 1 [Chimonanthus praecox]
          Length = 116

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = -2

Query: 387 DRQTACGCLKTAASSAAVVQ-KYASVLPRLCSVNLGYNVDPRIDCSKVR 244
           DRQTACGCLK+AASS + +Q   A  LP  C V++ Y   P  DCSKV+
Sbjct: 68  DRQTACGCLKSAASSISGIQYGLAGSLPSKCGVSIPYKTSPSTDCSKVK 116


>gb|ABY21307.1| pollen allergen Pla o 3 [Platanus orientalis]
          Length = 118

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -2

Query: 387 DRQTACGCLKTAASSAAVVQ-KYASVLPRLCSVNLGYNVDPRIDCSKVR 244
           DRQ ACGCLKTA++S + +Q   A+ L   C VNL Y + P IDCSKV+
Sbjct: 70  DRQAACGCLKTASTSISGIQLGNAASLAGKCGVNLPYKISPTIDCSKVK 118


>emb|CAL07989.1| lipid transfer protein [Platanus x acerifolia]
          Length = 118

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -2

Query: 387 DRQTACGCLKTAASSAAVVQ-KYASVLPRLCSVNLGYNVDPRIDCSKVR 244
           DRQ ACGCLKTA++S + +Q   A+ L   C VNL Y + P IDCSKV+
Sbjct: 70  DRQAACGCLKTASTSISGIQLGNAASLAGKCGVNLPYKISPTIDCSKVK 118


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