BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004699
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              269   5e-70
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   269   5e-70
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|2...   264   1e-68
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   263   3e-68

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  269 bits (687), Expect = 5e-70
 Identities = 131/135 (97%), Positives = 133/135 (98%)
 Frame = -3

Query: 741  FGPDKQGPNILLDDTLPSEVDKNLLSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 562
            FGPDKQGPNILLDDTL SEVDKNLL+AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA
Sbjct: 693  FGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 752

Query: 561  KIAQEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 382
            +IA EPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR
Sbjct: 753  RIAPEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 812

Query: 381  GHVTADVPQPGTPAY 337
            GHVTADVPQPGTPAY
Sbjct: 813  GHVTADVPQPGTPAY 827



 Score =  112 bits (281), Expect = 6e-23
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = -2

Query: 175  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQMM 5
            VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQM+
Sbjct: 875  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQMI 931


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
            [Vitis vinifera] gi|147858113|emb|CAN81413.1|
            hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  269 bits (687), Expect = 5e-70
 Identities = 131/135 (97%), Positives = 133/135 (98%)
 Frame = -3

Query: 741  FGPDKQGPNILLDDTLPSEVDKNLLSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 562
            FGPDKQGPNILLDDTL SEVDKNLL+AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA
Sbjct: 750  FGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 809

Query: 561  KIAQEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 382
            +IA EPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR
Sbjct: 810  RIAPEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 869

Query: 381  GHVTADVPQPGTPAY 337
            GHVTADVPQPGTPAY
Sbjct: 870  GHVTADVPQPGTPAY 884



 Score =  112 bits (281), Expect = 6e-23
 Identities = 56/57 (98%), Positives = 57/57 (100%)
 Frame = -2

Query: 175  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQMM 5
            VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQM+
Sbjct: 932  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQMI 988


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
            predicted protein [Populus trichocarpa]
          Length = 869

 Score =  264 bits (675), Expect = 1e-68
 Identities = 127/135 (94%), Positives = 132/135 (97%)
 Frame = -3

Query: 741  FGPDKQGPNILLDDTLPSEVDKNLLSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 562
            FGPDKQGPNILLDDTLP+EVDK LL AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA
Sbjct: 700  FGPDKQGPNILLDDTLPTEVDKGLLGAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 759

Query: 561  KIAQEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 382
            +IA EPLHRG+GQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDC++AIYTVLSRRR
Sbjct: 760  RIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCLTAIYTVLSRRR 819

Query: 381  GHVTADVPQPGTPAY 337
            GHVTADVPQPGTPAY
Sbjct: 820  GHVTADVPQPGTPAY 834



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/33 (96%), Positives = 33/33 (100%)
 Frame = -2

Query: 103 KGMSEDVSINKFFDEAMVVELAQQAADLHQQMM 5
           KGMSEDVSINKFFDEAMVVELAQQAAD+HQQMM
Sbjct: 837 KGMSEDVSINKFFDEAMVVELAQQAADIHQQMM 869


>ref|XP_002309312.1| predicted protein [Populus trichocarpa] gi|222855288|gb|EEE92835.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  264 bits (675), Expect = 1e-68
 Identities = 127/135 (94%), Positives = 132/135 (97%)
 Frame = -3

Query: 741  FGPDKQGPNILLDDTLPSEVDKNLLSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 562
            FGPDKQGPNILLDDTLP+EVDK LL AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA
Sbjct: 751  FGPDKQGPNILLDDTLPTEVDKGLLGAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 810

Query: 561  KIAQEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 382
            +IA EPLHRG+GQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDC++AIYTVLSRRR
Sbjct: 811  RIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCLTAIYTVLSRRR 870

Query: 381  GHVTADVPQPGTPAY 337
            GHVTADVPQPGTPAY
Sbjct: 871  GHVTADVPQPGTPAY 885



 Score =  102 bits (255), Expect = 6e-20
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -2

Query: 175  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADL 20
            VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAAD+
Sbjct: 933  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADI 984


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
            [Cucumis sativus] gi|449493675|ref|XP_004159406.1|
            PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
            component-like [Cucumis sativus]
          Length = 988

 Score =  263 bits (672), Expect = 3e-68
 Identities = 128/135 (94%), Positives = 132/135 (97%)
 Frame = -3

Query: 741  FGPDKQGPNILLDDTLPSEVDKNLLSAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 562
            FGPDKQGPNILLDDTL SEVDKNLL+AVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA
Sbjct: 750  FGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDA 809

Query: 561  KIAQEPLHRGTGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 382
            +IA EPLHRG+GQIIPTARRVAYS+FLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR
Sbjct: 810  RIAPEPLHRGSGQIIPTARRVAYSSFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRR 869

Query: 381  GHVTADVPQPGTPAY 337
            GHVTADV QPGTPAY
Sbjct: 870  GHVTADVAQPGTPAY 884



 Score =  111 bits (278), Expect = 1e-22
 Identities = 55/57 (96%), Positives = 57/57 (100%)
 Frame = -2

Query: 175  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMVVELAQQAADLHQQMM 5
            VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAM+VELAQQAADLHQQM+
Sbjct: 932  VLRPLEPAPIQHLAREFMVKTRRRKGMSEDVSINKFFDEAMMVELAQQAADLHQQMI 988