BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004690
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]              338   e-147
ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-...   319   e-141
ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|2...   330   e-138
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   324   e-138
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   322   e-136

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  338 bits (867), Expect(2) = e-147
 Identities = 176/282 (62%), Positives = 198/282 (70%), Gaps = 4/282 (1%)
 Frame = -2

Query: 1105 EWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVXXXXXXXXXXXXXGST-SNS 929
            EWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+              +  S S
Sbjct: 197  EWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPLLECSTANKAPMSKS 256

Query: 928  IPGSQSSFPKARMLHKKAAYGNGTKHTST---THKNKGSTSQRLHPGMLSSHDRATAHYG 758
             P SQS   ++R   +K AYGNG+K ++T   + + KG   QRLHPGMLSS DRAT+HYG
Sbjct: 257  FPASQSVNVRSRAPQRKFAYGNGSKQSATGRTSSQAKGLVRQRLHPGMLSSQDRATSHYG 316

Query: 757  AVIGLKVCEDGMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSKGIQLAVTQGSSLV 578
            AV GLKV +DGMYLLSAGSDSRLRLWDI SGCNTLVNFE  RLQTSK +QLA+T  S+LV
Sbjct: 317  AVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQTSKAMQLAITNDSALV 376

Query: 577  FVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQXXXXXXXXXXXXXXXXXXXXE 398
            FVPCM+AVKAFDVWSG+T +TFRGHYE VNCCW S QDQ                    E
Sbjct: 377  FVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQ--------------------E 416

Query: 397  LYTGSNDRQILVWSPSGSVHAEVDERGGEALMSTSDQDNWSD 272
            LYTG NDRQILVWSPS     E+D    E  +   DQDNWSD
Sbjct: 417  LYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 458



 Score =  212 bits (539), Expect(2) = e-147
 Identities = 106/155 (68%), Positives = 117/155 (75%)
 Frame = -3

Query: 1686 RYLLAGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVXXXXXXXXXX 1507
            RYLL+GASD SAAVYDIQ A  YEGG LVAKH+SIFVVDKQHE GHKYA+          
Sbjct: 57   RYLLSGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAI---------- 106

Query: 1506 XXXXXXXXXXXXXXXXXXXXSSAVWYPIDTGLFVTGSFDHYVNVWDTNTTQVVMNFKMPG 1327
                                SSA+WYPIDTGLF+TGS+DHY+NVWDTNTTQVV+NFKMPG
Sbjct: 107  --------------------SSAIWYPIDTGLFITGSYDHYINVWDTNTTQVVVNFKMPG 146

Query: 1326 KVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASGA 1222
            K+YRTAMSS+A +HMLIA GTEDVQVRLCDIASGA
Sbjct: 147  KIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASGA 181


>ref|XP_002285324.1| PREDICTED: DNA excision repair protein ERCC-8-like [Vitis vinifera]
          Length = 450

 Score =  319 bits (818), Expect(2) = e-141
 Identities = 171/283 (60%), Positives = 192/283 (67%), Gaps = 5/283 (1%)
 Frame = -2

Query: 1105 EWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVXXXXXXXXXXXXXGSTSNSI 926
            EWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+              ST+N +
Sbjct: 197  EWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPLLEC-----STANKV 251

Query: 925  PGSQSSFPKA-----RMLHKKAAYGNGTKHTSTTHKNKGSTSQRLHPGMLSSHDRATAHY 761
               + +          +LH K   G+ T  TS+  + KG   QRLHPGMLSS DRAT+HY
Sbjct: 252  SFLKQNVSMGMEVGLHVLHSKT--GSATGRTSS--QAKGLVRQRLHPGMLSSQDRATSHY 307

Query: 760  GAVIGLKVCEDGMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSKGIQLAVTQGSSL 581
            GAV GLKV +DGMYLLSAGSDSRLRLWDI SGCNTLVNFE  RLQTSK +QLA+T  S+L
Sbjct: 308  GAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQTSKAMQLAITNDSAL 367

Query: 580  VFVPCMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQXXXXXXXXXXXXXXXXXXXX 401
            VFVPCM+AVKAFDVWSG+T +TFRGHYE VNCCW S QDQ                    
Sbjct: 368  VFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQ-------------------- 407

Query: 400  ELYTGSNDRQILVWSPSGSVHAEVDERGGEALMSTSDQDNWSD 272
            ELYTG NDRQILVWSPS     E+D    E  +   DQDNWSD
Sbjct: 408  ELYTGGNDRQILVWSPSRLNFDEMDHGSREEPIHAQDQDNWSD 450



 Score =  212 bits (539), Expect(2) = e-141
 Identities = 106/155 (68%), Positives = 117/155 (75%)
 Frame = -3

Query: 1686 RYLLAGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVXXXXXXXXXX 1507
            RYLL+GASD SAAVYDIQ A  YEGG LVAKH+SIFVVDKQHE GHKYA+          
Sbjct: 57   RYLLSGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAI---------- 106

Query: 1506 XXXXXXXXXXXXXXXXXXXXSSAVWYPIDTGLFVTGSFDHYVNVWDTNTTQVVMNFKMPG 1327
                                SSA+WYPIDTGLF+TGS+DHY+NVWDTNTTQVV+NFKMPG
Sbjct: 107  --------------------SSAIWYPIDTGLFITGSYDHYINVWDTNTTQVVVNFKMPG 146

Query: 1326 KVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASGA 1222
            K+YRTAMSS+A +HMLIA GTEDVQVRLCDIASGA
Sbjct: 147  KIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASGA 181


>ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|222860803|gb|EEE98345.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  330 bits (845), Expect(2) = e-138
 Identities = 173/279 (62%), Positives = 193/279 (69%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1105 EWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVXXXXXXXXXXXXXGSTSNSI 926
            EWS SSEWVL+TGGCDGAIRFWDIRRAGCFLVLDQS+SQ+              STS ++
Sbjct: 200  EWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRPPVLARSAV--STSKAL 257

Query: 925  PGSQSSFPKARMLHKKAAYGNGTKHTSTTH-KNKGSTSQRLHPGMLSSHDRATAHYGAVI 749
               Q+   K RM  KK+  GNG KH+       KG   QRLHPGMLSS DRATAHYGAV 
Sbjct: 258  SKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQRLHPGMLSSQDRATAHYGAVT 317

Query: 748  GLKVCEDGMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSKGIQLAVTQGSSLVFVP 569
            GLK+ EDGMYLLSAGSDSR+RLWD+ESG NTLVNFE  RLQTSK IQLA  Q S+LVFVP
Sbjct: 318  GLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSKPIQLATAQDSNLVFVP 377

Query: 568  CMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQXXXXXXXXXXXXXXXXXXXXELYT 389
            CM++VKAFDVWSG+T++TFRGHYE+VNCCWFSSQDQ                    ELYT
Sbjct: 378  CMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQ--------------------ELYT 417

Query: 388  GSNDRQILVWSPSGSVHAEVDERGGEALMSTSDQDNWSD 272
            G NDRQILVWSP+  +         E      DQDNWSD
Sbjct: 418  GGNDRQILVWSPARLI-------PNEDASPAEDQDNWSD 449



 Score =  189 bits (481), Expect(2) = e-138
 Identities = 95/158 (60%), Positives = 114/158 (72%), Gaps = 3/158 (1%)
 Frame = -3

Query: 1686 RYLLAGASDGSAAVYDIQCAARYEGGG---LVAKHESIFVVDKQHEQGHKYAVXXXXXXX 1516
            RYLL+GASD SA+V+DIQ A  +EGGG   L+AKH+S+  +DKQH+ GHK+A+       
Sbjct: 57   RYLLSGASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNGHKFAI------- 109

Query: 1515 XXXXXXXXXXXXXXXXXXXXXXXSSAVWYPIDTGLFVTGSFDHYVNVWDTNTTQVVMNFK 1336
                                   SSA+WYPIDTGLFVTGS+DHY+ VWDTN+TQ+V+NFK
Sbjct: 110  -----------------------SSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFK 146

Query: 1335 MPGKVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASGA 1222
            +PGKVYRTAMS +A SHMLIA GTEDVQVRLCDIASGA
Sbjct: 147  LPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGA 184


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  324 bits (831), Expect(2) = e-138
 Identities = 170/279 (60%), Positives = 194/279 (69%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1105 EWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVXXXXXXXXXXXXXGSTSNSI 926
            EWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQS+SQ+              STS S+
Sbjct: 195  EWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSL 254

Query: 925  PGSQSSFPKARMLHKKAAYGNGTKHTSTTH-KNKGSTSQRLHPGMLSSHDRATAHYGAVI 749
              SQ S  K+R+ HKK   GN TK +ST     KGST QRLHPG+LS  DRA +HYGAV 
Sbjct: 255  LASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPGLLSGQDRAVSHYGAVT 314

Query: 748  GLKVCEDGMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSKGIQLAVTQGSSLVFVP 569
            GLKV  DGMYLLSAGSDSRL+LWD+ESGCNTLVNFE  RLQT+K +QLA +Q SSLVF P
Sbjct: 315  GLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPLQLATSQDSSLVFAP 374

Query: 568  CMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQXXXXXXXXXXXXXXXXXXXXELYT 389
            CM+ VKAFD+W+G+T LTF GHYE VNCCW++  DQ                    ELYT
Sbjct: 375  CMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQ--------------------ELYT 414

Query: 388  GSNDRQILVWSPSGSVHAEVDERGGEALMSTSDQDNWSD 272
            G NDRQILVWSPS +   E+D        ST+D+DNWSD
Sbjct: 415  GGNDRQILVWSPSQN-STELDWE------STADKDNWSD 446



 Score =  194 bits (494), Expect(2) = e-138
 Identities = 100/155 (64%), Positives = 113/155 (72%)
 Frame = -3

Query: 1686 RYLLAGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVXXXXXXXXXX 1507
            RYLL+GASD SAAV+DIQ A   EG  L+AKH+ IF VDKQHE GHKYA+          
Sbjct: 57   RYLLSGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAI---------- 104

Query: 1506 XXXXXXXXXXXXXXXXXXXXSSAVWYPIDTGLFVTGSFDHYVNVWDTNTTQVVMNFKMPG 1327
                                SSA+WYP+DTGLFVTGSFDH++NVWDTNTTQVV+NFK+PG
Sbjct: 105  --------------------SSAIWYPVDTGLFVTGSFDHHINVWDTNTTQVVVNFKLPG 144

Query: 1326 KVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASGA 1222
            KVYRTAMSS+A SHMLIA GTEDVQVRLCDI+SGA
Sbjct: 145  KVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGA 179


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  322 bits (826), Expect(2) = e-136
 Identities = 169/279 (60%), Positives = 186/279 (66%), Gaps = 1/279 (0%)
 Frame = -2

Query: 1105 EWSNSSEWVLMTGGCDGAIRFWDIRRAGCFLVLDQSRSQVXXXXXXXXXXXXXGSTSNSI 926
            EWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQS+SQ+               +S S+
Sbjct: 229  EWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPVLPRSVANKVSSRSL 288

Query: 925  PGSQSSFPKARMLHKKAAYGNGTKHTSTTHKN-KGSTSQRLHPGMLSSHDRATAHYGAVI 749
               Q    K+R   KK+A GNG K +       KG   QRLHPGMLS  DRATAHYGAV 
Sbjct: 289  LAGQHLSSKSRAPLKKSATGNGKKQSPLGRTPVKGPVRQRLHPGMLSIQDRATAHYGAVT 348

Query: 748  GLKVCEDGMYLLSAGSDSRLRLWDIESGCNTLVNFEATRLQTSKGIQLAVTQGSSLVFVP 569
            GLK+ EDGMYLLSAGSDSR+RLWD+ESGCNTLVNFE  RLQTSK IQLA TQ SSLVFVP
Sbjct: 349  GLKITEDGMYLLSAGSDSRMRLWDLESGCNTLVNFETVRLQTSKAIQLATTQDSSLVFVP 408

Query: 568  CMSAVKAFDVWSGRTFLTFRGHYENVNCCWFSSQDQXXXXXXXXXXXXXXXXXXXXELYT 389
            CM+AVKAFD+WSG T +TFRGHYE VNCCW+SSQDQ                    E+YT
Sbjct: 409  CMTAVKAFDLWSGMTSMTFRGHYEYVNCCWYSSQDQ--------------------EIYT 448

Query: 388  GSNDRQILVWSPSGSVHAEVDERGGEALMSTSDQDNWSD 272
            G NDRQILVW P   +  E             DQDNWSD
Sbjct: 449  GGNDRQILVWCPPRLIDMETG--------PAEDQDNWSD 479



 Score =  191 bits (486), Expect(2) = e-136
 Identities = 95/155 (61%), Positives = 111/155 (71%)
 Frame = -3

Query: 1686 RYLLAGASDGSAAVYDIQCAARYEGGGLVAKHESIFVVDKQHEQGHKYAVXXXXXXXXXX 1507
            RYL++GASD SAAV+D+Q A  +E  G++AKH+ +F+VDKQHE  HKYAV          
Sbjct: 89   RYLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAV---------- 138

Query: 1506 XXXXXXXXXXXXXXXXXXXXSSAVWYPIDTGLFVTGSFDHYVNVWDTNTTQVVMNFKMPG 1327
                                SSA WYP+DTGLFVTGS+DHY+ VWDTNTTQVV+NFK+PG
Sbjct: 139  --------------------SSATWYPVDTGLFVTGSYDHYIKVWDTNTTQVVVNFKLPG 178

Query: 1326 KVYRTAMSSVAKSHMLIATGTEDVQVRLCDIASGA 1222
            KVYRTAMS +A SHMLIA GTEDVQVRLCDIASGA
Sbjct: 179  KVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGA 213