BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004681
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 3...    69   3e-10
emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera]    68   7e-10
ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, ...    67   1e-09
ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002314941.1| predicted protein [Populus trichocarpa] gi|222863981|gb|EEF01112.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
 Frame = -2

Query: 396 IAAPDEQPNP------EAEDRIDVREVHANAGPLXXXXXXXXXXXXVPAAEHGEQP-QRP 238
           +AA +E PNP      E  +R+ + EVH     +            +PA    +Q  QRP
Sbjct: 204 VAAAEELPNPAVGEIQEVGERV-IEEVHEAPVNVNPSPTGTSVSREIPARGPTDQLLQRP 262

Query: 237 EVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMDAGSLGG 103
             RV K +DDRLFTWAA+GLT+AI+VLLLKKF++SSG  A  + G
Sbjct: 263 VTRVQKPADDRLFTWAAVGLTIAIVVLLLKKFMKSSGYGALFMDG 307


>ref|XP_002277394.1| PREDICTED: ubiquitin-conjugating enzyme E2 32 [Vitis vinifera]
           gi|296083258|emb|CBI22894.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = -2

Query: 396 IAAPDEQPNPEAEDRIDVRE-----VHANAGPLXXXXXXXXXXXXVPAAEHGEQPQRPEV 232
           IAA DE  +P   DRI   E     ++AN  P+               A      Q+P  
Sbjct: 206 IAAADELSDPRVADRIVEEEPPQVPLNANPSPVSRQ------------ASAARLLQKPMP 253

Query: 231 RVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMDA 118
           RV +Q+DDRL TWAA+GLT+AI+VLLLKKF++SSG  A
Sbjct: 254 RVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHGA 291


>emb|CAN72172.1| hypothetical protein VITISV_020701 [Vitis vinifera]
          Length = 297

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
 Frame = -2

Query: 396 IAAPDEQPNPEAEDRIDVRE-----VHANAGPLXXXXXXXXXXXXVPAAEHGEQPQRPEV 232
           IAA DE  +P   DRI   E     ++AN  P+               A      Q+P  
Sbjct: 206 IAAADELSDPRVADRIVEEEPPQVPLNANPSPVSRQ------------ASAVRLLQKPVP 253

Query: 231 RVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMDA 118
           RV +Q+DDRL TWAA+GLT+AI+VLLLKKF++SSG  A
Sbjct: 254 RVQRQADDRLLTWAAVGLTIAIMVLLLKKFLKSSGHGA 291


>ref|XP_002519212.1| non-canonical ubiquitin conjugating enzyme, putative [Ricinus
           communis] gi|223541527|gb|EEF43076.1| non-canonical
           ubiquitin conjugating enzyme, putative [Ricinus
           communis]
          Length = 309

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/49 (67%), Positives = 40/49 (81%), Gaps = 5/49 (10%)
 Frame = -2

Query: 243 RPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSG-----MDAGS 112
           RPE RV + +DDRLFTWAA+GLT+AI+VLLLKKF++SSG     MD GS
Sbjct: 261 RPETRVQRPADDRLFTWAAVGLTIAIVVLLLKKFLKSSGHGAVFMDGGS 309


>ref|XP_002312335.1| predicted protein [Populus trichocarpa] gi|222852155|gb|EEE89702.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
 Frame = -2

Query: 396 IAAPDEQPNP------EAEDRI--DVREVHANAGPLXXXXXXXXXXXXVPAAEHGEQP-Q 244
           + A ++ PNP      E  +R+   V E H  A P             VPA    +Q  Q
Sbjct: 206 VTAAEDLPNPAVGEIQEVGERVFEQVHEAHITANP---SPAGTSASREVPAKCSSDQLLQ 262

Query: 243 RPEVRVSKQSDDRLFTWAAIGLTVAILVLLLKKFVRSSGMDAGSLGG 103
           R   RV K +DDRLFTWAA+GL +AI+VLLLKKF++SSG  A  + G
Sbjct: 263 RQVTRVQKPADDRLFTWAAVGLAIAIVVLLLKKFMKSSGYGAFFMDG 309