BLASTX nr result

ID: Coptis23_contig00004676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004676
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262...   333   5e-89
emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]   333   5e-89
ref|XP_002515453.1| conserved hypothetical protein [Ricinus comm...   278   3e-72
ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago ...   269   1e-69
ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68

>ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262872 [Vitis vinifera]
          Length = 371

 Score =  333 bits (855), Expect = 5e-89
 Identities = 178/338 (52%), Positives = 220/338 (65%), Gaps = 5/338 (1%)
 Frame = -1

Query: 1242 SGNPNLATCLYNTGLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXF--H 1069
            SGNPNLATC+Y+T LG+  LTW +N FGR+LH+ LH     +                 H
Sbjct: 39   SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 1068 LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 895
            LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYVAVV + EMI
Sbjct: 99   LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSWPEPQHGFYVAVVADGEMI 158

Query: 894  LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARFGGKVRDISIDCSVCDE 715
            LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A FGGK R+ISIDCSV D+
Sbjct: 159  LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 714  PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVXXXXX 535
            P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAV     
Sbjct: 219  PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAVFMFKF 278

Query: 534  XXXXXXXXXXXXELKLKQNGEMICWQQQQGYNGYLGMNGFERKKLKR-XXXXXXXXXXXX 358
                          +L+Q  + +  +      G+ GMNG ERKK+K+             
Sbjct: 279  ERVGFEEEDE----ELQQQQQHLNEKNGMALCGF-GMNGIERKKMKKSLLKTTRSSSSSS 333

Query: 357  XXXXXXXXXXSIMEWASKEENELQSQSGFSLLVYAWKS 244
                      S+MEWAS EE EL+S SGFSLLVYAWKS
Sbjct: 334  LSSASSGCSSSVMEWASTEEMELKSPSGFSLLVYAWKS 371


>emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]
          Length = 372

 Score =  333 bits (855), Expect = 5e-89
 Identities = 179/345 (51%), Positives = 220/345 (63%), Gaps = 12/345 (3%)
 Frame = -1

Query: 1242 SGNPNLATCLYNTGLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXF--H 1069
            SGNPNLATC+Y+T LG+  LTW +N FGR+LH+ LH     +                 H
Sbjct: 39   SGNPNLATCVYHTDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFH 98

Query: 1068 LHLKPFLFWRKHGVKRFDAKTS--SKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMI 895
            LH+KPF+FW+K+G K+     +   + I ++WDLT+AKF S  EPQ  FYV VV + EMI
Sbjct: 99   LHIKPFVFWKKYGSKKLHVAGAPGGRDIRVFWDLTRAKFGSXPEPQHGFYVXVVADGEMI 158

Query: 894  LLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARFGGKVRDISIDCSVCDE 715
            LLVGD  +EAY +T+A+K E+ Q LVLRREHVFGNK+YTT+A FGGK R+ISIDCSV D+
Sbjct: 159  LLVGDSEKEAYNKTRAKKAERTQVLVLRREHVFGNKVYTTRASFGGKTREISIDCSVGDD 218

Query: 714  PKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAVXXXXX 535
            P+LSFSVD KRVL IKRLKWKFRGNEKIEVDG+PIQVSWDV+NWLF+D  + HAV     
Sbjct: 219  PRLSFSVDRKRVLQIKRLKWKFRGNEKIEVDGIPIQVSWDVYNWLFDDVMESHAV----- 273

Query: 534  XXXXXXXXXXXXELKLKQNGEMICWQQQQGYNGY-------LGMNGFERKKLKR-XXXXX 379
                         +  ++  E +  QQQQ  N          GMNG ERKK+K+      
Sbjct: 274  ------FMFKFERVGFEEEDEELQQQQQQHLNEKNGMALCGFGMNGIERKKMKKSLLKTT 327

Query: 378  XXXXXXXXXXXXXXXXXSIMEWASKEENELQSQSGFSLLVYAWKS 244
                             S+MEWAS EE +L+S SGFSLLVYAWKS
Sbjct: 328  RSSSSSSLSSASSGCSSSVMEWASTEEMDLKSPSGFSLLVYAWKS 372


>ref|XP_002515453.1| conserved hypothetical protein [Ricinus communis]
            gi|223545397|gb|EEF46902.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 336

 Score =  278 bits (710), Expect = 3e-72
 Identities = 150/294 (51%), Positives = 195/294 (66%), Gaps = 19/294 (6%)
 Frame = -1

Query: 1071 HLHLKPFLFWRKHGVKRFD---------AKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVA 919
            HL +KP++FW+KHG K+           +  S+ +I+I+WDL++AKF S  EPQS FY+A
Sbjct: 45   HLDIKPYIFWKKHGSKKLQIINHQDYHTSTASTPAIQIFWDLSRAKFGSGPEPQSGFYIA 104

Query: 918  VVVNSEMILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARFGGKVRDIS 739
            VVV  E++LLVGD +++A+ +T+ARK E+ Q LVLRREHV+GN+++TTKARFGGK RDIS
Sbjct: 105  VVVEREIVLLVGDSTKQAFAKTRARKQERNQVLVLRREHVYGNRVFTTKARFGGKNRDIS 164

Query: 738  IDCSVCDEPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDG 559
            IDC+V  + +LSFSVD+KRVL IK+LKWKFRGNEKIEVDGVPIQVSWDV+NWLFED ++G
Sbjct: 165  IDCTVNGDARLSFSVDNKRVLHIKQLKWKFRGNEKIEVDGVPIQVSWDVYNWLFEDINNG 224

Query: 558  HAV------XXXXXXXXXXXXXXXXXELKLKQNGEMICWQQQQGYNGYLGMNGFE----R 409
            HAV                        ++ ++NG ++ WQQ    N   GM+G E    R
Sbjct: 225  HAVFMFRFESTDIEDDQEQEQEEECAGVQDEKNG-VVPWQQVSFNN--FGMSGIEWRRMR 281

Query: 408  KKLKRXXXXXXXXXXXXXXXXXXXXXXSIMEWASKEENELQSQSGFSLLVYAWK 247
            + L R                      SIMEWAS EENEL + +GFSLLVYAW+
Sbjct: 282  RSLMRTGRSSSSSSISMSSASSGGGSSSIMEWASTEENELSAPNGFSLLVYAWR 335


>ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago truncatula]
            gi|355492363|gb|AES73566.1| hypothetical protein
            MTR_3g106250 [Medicago truncatula]
          Length = 346

 Score =  269 bits (688), Expect = 1e-69
 Identities = 145/334 (43%), Positives = 200/334 (59%), Gaps = 2/334 (0%)
 Frame = -1

Query: 1242 SGNPNLATCLYNTGLGLAALTWCKNIFGRALHIDLHFEEQEDEEXXXXXXXXXXXXFHLH 1063
            S NPNL T LY + +GL +LTW ++I GR+LH+ LH    +                HLH
Sbjct: 32   STNPNLTTYLYQSNVGLVSLTWSRSILGRSLHVQLHHHPFDSPPTNPSSSSSSF---HLH 88

Query: 1062 LKPFLFWRKHGVKRFDAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEMILLVG 883
            +KPF+FW+KHG K+  + T      ++W+L+KAKF S  EP S FY AVVV++EM LLVG
Sbjct: 89   IKPFIFWKKHGTKKLSSNT-----HLFWNLSKAKFGSGPEPDSGFYFAVVVDNEMTLLVG 143

Query: 882  DLSEEAYERTKARKLEK-IQSLVLRREHVFGNKLYTTKARFGGKVRDISIDCSVCDEPKL 706
            D +++AY ++K+++ +   Q LV++REHV+ NK+Y T+ARFGGK+R+I IDC   D  +L
Sbjct: 144  DSNKDAYAKSKSKEHKNNFQYLVMKREHVYANKIYNTRARFGGKMREIQIDCGGRDHSRL 203

Query: 705  SFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLF-EDTDDGHAVXXXXXXX 529
             FSVD ++VL IKRLKWKFRGNE++E+DGVP+Q+SWDV+NWLF +D  DGHA+       
Sbjct: 204  CFSVDGQKVLQIKRLKWKFRGNERVEIDGVPVQISWDVYNWLFVKDNSDGHAIFMFKFEE 263

Query: 528  XXXXXXXXXXELKLKQNGEMICWQQQQGYNGYLGMNGFERKKLKRXXXXXXXXXXXXXXX 349
                        K K    ++  Q        L +  +E  K+ +               
Sbjct: 264  EDEDEQQRG---KEKSLTNLLAQQN-------LNLGVYELGKMGK--SWSSSSVSMASSG 311

Query: 348  XXXXXXXSIMEWASKEENELQSQSGFSLLVYAWK 247
                   S++EW+S EENEL    GFSLLVYAWK
Sbjct: 312  GSFGASSSVLEWSSVEENELVVPVGFSLLVYAWK 345


>ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|222865752|gb|EEF02883.1|
            predicted protein [Populus trichocarpa]
          Length = 240

 Score =  265 bits (677), Expect = 2e-68
 Identities = 132/236 (55%), Positives = 172/236 (72%), Gaps = 9/236 (3%)
 Frame = -1

Query: 1230 NLATCLYNTGLGLAALTWCKNIFGRALHIDLHFEEQE----DEEXXXXXXXXXXXXFHLH 1063
            NL TCLY T LGL +LTW  ++ G +LH+ LH  +                     FHL+
Sbjct: 1    NLTTCLYQTDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLSTISFHLN 60

Query: 1062 LKPFLFWRKHGVKRF-----DAKTSSKSIEIYWDLTKAKFFSSSEPQSSFYVAVVVNSEM 898
            +KPFLFW++HG K+      +  T +  I+I+WDL++A+F S  EPQS FY+AVVV  E+
Sbjct: 61   IKPFLFWKRHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEPQSRFYIAVVVEREV 120

Query: 897  ILLVGDLSEEAYERTKARKLEKIQSLVLRREHVFGNKLYTTKARFGGKVRDISIDCSVCD 718
            +L+VGDL++EA+ +TKA K E+ Q LVLRREHVFGN++YTT+ARFGG+ R ISIDCSV +
Sbjct: 121  VLVVGDLTKEAFAKTKALKQERPQVLVLRREHVFGNRVYTTRARFGGRNRVISIDCSVNN 180

Query: 717  EPKLSFSVDSKRVLVIKRLKWKFRGNEKIEVDGVPIQVSWDVFNWLFEDTDDGHAV 550
            + +L FSVD+KRVL IKRLKWKFRGNE+IEVDGVPIQVSWDV+NWLF+  ++ HAV
Sbjct: 181  DARLCFSVDNKRVLQIKRLKWKFRGNERIEVDGVPIQVSWDVYNWLFDGINNDHAV 236


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