BLASTX nr result

ID: Coptis23_contig00004675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004675
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204...   176   6e-42
ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|1...   171   1e-40
ref|XP_002514644.1| conserved hypothetical protein [Ricinus comm...   171   2e-40
ref|XP_002871303.1| hypothetical protein ARALYDRAFT_487637 [Arab...   166   6e-39
gb|AAL47451.1| AT5g08050/F13G24_250 [Arabidopsis thaliana] gi|33...   162   9e-38

>ref|XP_004137438.1| PREDICTED: uncharacterized protein LOC101204037 [Cucumis sativus]
           gi|449486926|ref|XP_004157444.1| PREDICTED:
           uncharacterized protein LOC101227416 [Cucumis sativus]
          Length = 197

 Score =  176 bits (445), Expect = 6e-42
 Identities = 113/196 (57%), Positives = 123/196 (62%), Gaps = 20/196 (10%)
 Frame = +3

Query: 63  MEAMGVCSNSC-GVPFFNSYPTSIRSRPHQPL---LVAAQKP---AVSTVTSR------- 200
           ME    CS+S     F  SYP++  SR  +PL    +A +KP   A  TV S+       
Sbjct: 1   MEVTSFCSSSTRAASFIYSYPSTTTSRRKRPLHLHSMATEKPLPSAAKTVGSKKINTTVF 60

Query: 201 ------PVVSKKESAGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLS 362
                 P  S   S   PIKLLTRVEQLKLL+KAEKAGLLS AEKAGLSLSSIEKLGLLS
Sbjct: 61  PLGEKGPRSSISLSTSPPIKLLTRVEQLKLLSKAEKAGLLSAAEKAGLSLSSIEKLGLLS 120

Query: 363 KAEELGVLSAATDPEXXXXXXXXXXXXXXXXXXCAYIVPEDYPWEVVLQVAVALTSIVGG 542
           KAEELGVLSAATDP                   C Y+VPED  WE+VLQVAVAL SIVGG
Sbjct: 121 KAEELGVLSAATDPGTPGALLSLSLGLLLLGPSCVYLVPEDSVWEIVLQVAVALVSIVGG 180

Query: 543 SAALAASNFVSNLQRS 590
           SAA AASN VSNLQRS
Sbjct: 181 SAAFAASNLVSNLQRS 196


>ref|XP_002328665.1| predicted protein [Populus trichocarpa] gi|118487258|gb|ABK95457.1|
           unknown [Populus trichocarpa]
           gi|118488248|gb|ABK95943.1| unknown [Populus
           trichocarpa] gi|222838841|gb|EEE77192.1| predicted
           protein [Populus trichocarpa]
          Length = 194

 Score =  171 bits (434), Expect = 1e-40
 Identities = 110/194 (56%), Positives = 122/194 (62%), Gaps = 18/194 (9%)
 Frame = +3

Query: 63  MEAMGVCSNSCGVPF-FNSYPTSIRSRPHQPLLV---AAQKP---AVSTVTSRPVV---- 209
           MEA  +C  S G PF   +   +I      PLL+   A+QKP   A  TV+SR       
Sbjct: 1   MEATALCG-SRGPPFRMKAAAAAISHTNSSPLLIKSMASQKPLPSAAKTVSSRKSSNVFP 59

Query: 210 -------SKKESAGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKA 368
                  S+  +   PIKLLTRVEQLKLLTKAEKAGLLS AEK GLSLS+IEKLGLLSKA
Sbjct: 60  PGEQGPRSRPLATSPPIKLLTRVEQLKLLTKAEKAGLLSAAEKFGLSLSTIEKLGLLSKA 119

Query: 369 EELGVLSAATDPEXXXXXXXXXXXXXXXXXXCAYIVPEDYPWEVVLQVAVALTSIVGGSA 548
           EELGVLSAATDP                   CAY+VPEDYPWEV LQVAV L  + GGSA
Sbjct: 120 EELGVLSAATDPGTPGALLSLSLGLLFLGPSCAYLVPEDYPWEVALQVAVVLLCVAGGSA 179

Query: 549 ALAASNFVSNLQRS 590
           A AASNFVSNLQ+S
Sbjct: 180 AFAASNFVSNLQKS 193


>ref|XP_002514644.1| conserved hypothetical protein [Ricinus communis]
           gi|223546248|gb|EEF47750.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score =  171 bits (432), Expect = 2e-40
 Identities = 109/190 (57%), Positives = 124/190 (65%), Gaps = 14/190 (7%)
 Frame = +3

Query: 63  MEAMGVCSNSCGVPFFNSYPTSIRSRPHQPLLVAAQKP---AVSTVTSR------PVVSK 215
           MEA  + S S G+ F  S P   R+  ++ +  AAQKP   A  TV+SR      P+  K
Sbjct: 1   MEAAAI-SGSRGICFLYSSPNGKRTLLNRSM--AAQKPVPSAAKTVSSRKNSTVFPLGEK 57

Query: 216 KES-----AGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSSIEKLGLLSKAEELG 380
                      PIKLLTRVE+LKLL+KAEKAGLLS AEK GLSLS+IEKLGLLSKAEELG
Sbjct: 58  GPRNSPLVTSPPIKLLTRVEELKLLSKAEKAGLLSAAEKFGLSLSTIEKLGLLSKAEELG 117

Query: 381 VLSAATDPEXXXXXXXXXXXXXXXXXXCAYIVPEDYPWEVVLQVAVALTSIVGGSAALAA 560
           VLSAATDP                   C Y+VPEDYPWE+VLQVAVAL S+VGGSAA AA
Sbjct: 118 VLSAATDPGTPGALFSLSLGLLLLGPSCVYLVPEDYPWEIVLQVAVALVSVVGGSAAFAA 177

Query: 561 SNFVSNLQRS 590
           SN VSNLQ+S
Sbjct: 178 SNLVSNLQKS 187


>ref|XP_002871303.1| hypothetical protein ARALYDRAFT_487637 [Arabidopsis lyrata subsp.
           lyrata] gi|297317140|gb|EFH47562.1| hypothetical protein
           ARALYDRAFT_487637 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score =  166 bits (419), Expect = 6e-39
 Identities = 91/144 (63%), Positives = 107/144 (74%)
 Frame = +3

Query: 159 VAAQKPAVSTVTSRPVVSKKESAGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSS 338
           +A +KP+ S  T R + SKK +A   +KLLTRVEQLKLLTKAEKAGLLS AEK+G SLS+
Sbjct: 15  MANKKPSPSAAT-RTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLST 73

Query: 339 IEKLGLLSKAEELGVLSAATDPEXXXXXXXXXXXXXXXXXXCAYIVPEDYPWEVVLQVAV 518
           IE+LGLL+KAEE GVLSAAT+PE                  CAY+VPEDY WEVV+QV V
Sbjct: 74  IERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVCAYVVPEDYTWEVVVQVLV 133

Query: 519 ALTSIVGGSAALAASNFVSNLQRS 590
           AL S++GGSAA AAS FVSNLQ+S
Sbjct: 134 ALLSVLGGSAAFAASGFVSNLQKS 157


>gb|AAL47451.1| AT5g08050/F13G24_250 [Arabidopsis thaliana]
           gi|33589718|gb|AAQ22625.1| At5g08050/F13G24_250
           [Arabidopsis thaliana]
          Length = 158

 Score =  162 bits (409), Expect = 9e-38
 Identities = 90/144 (62%), Positives = 106/144 (73%)
 Frame = +3

Query: 159 VAAQKPAVSTVTSRPVVSKKESAGTPIKLLTRVEQLKLLTKAEKAGLLSTAEKAGLSLSS 338
           +A +KP+ S  T R + SKK +A   +KLLTRVEQLKLLTKAEKAGLLS AEK+G SLS+
Sbjct: 15  MANKKPSPSAAT-RTITSKKSTATPQVKLLTRVEQLKLLTKAEKAGLLSLAEKSGFSLST 73

Query: 339 IEKLGLLSKAEELGVLSAATDPEXXXXXXXXXXXXXXXXXXCAYIVPEDYPWEVVLQVAV 518
           IE+LGLL+KAEE GVLSAAT+PE                   AY+VPEDY WEVV+QV V
Sbjct: 74  IERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPVFAYVVPEDYTWEVVIQVLV 133

Query: 519 ALTSIVGGSAALAASNFVSNLQRS 590
           AL S++GGSAA AAS FVSNLQ+S
Sbjct: 134 ALLSVLGGSAAFAASGFVSNLQKS 157


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