BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004670
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53142.1| JHL05D22.13 [Jatropha curcas]                          70   3e-10
ref|XP_002511755.1| poly(A) polymerase cid, putative [Ricinus co...    69   7e-10

>dbj|BAJ53142.1| JHL05D22.13 [Jatropha curcas]
          Length = 748

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
 Frame = -3

Query: 454 EQRNAPPGFHKNPKGLEQRGSN--SMSARKEFERNVGKVEDSRHKMNHFVNHSYNKHETM 281
           E R  PPGF   P+G    G N   +S R+E + NV K + ++ ++++  N  ++  + +
Sbjct: 251 ETRMPPPGFSNKPRG----GGNWDYVSRRRELDYNVNKEKGNQGELSNR-NALFSSEDKI 305

Query: 280 RRTSPNRHGVQGDASLRMQLSGQLDRPSPPVGSKLHSVPALDIEESLATLHGQGVEEDGR 101
            R         GD S  + L+GQLDRP PP GS L+SV A D+E S+  +  + V EDG 
Sbjct: 306 PR--------DGDRSRDLGLTGQLDRPGPPAGSNLYSVSAADVELSMLNVEAE-VVEDG- 355

Query: 100 GNFRRHENRSRDEAGSPTNQMIGRRGKDD 14
               + E R  DEAG      +   G+ D
Sbjct: 356 ----KDEGRELDEAGEELVDSLLLEGESD 380


>ref|XP_002511755.1| poly(A) polymerase cid, putative [Ricinus communis]
           gi|223548935|gb|EEF50424.1| poly(A) polymerase cid,
           putative [Ricinus communis]
          Length = 696

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
 Frame = -3

Query: 454 EQRNAPPGFHKNPKGLEQRGSNS--MSARKEFERNVGKVEDSRHKMNHFVNHSYNKHETM 281
           E R  PPGF   P+G    G N   +S R+E + NV K +          NHS       
Sbjct: 240 ETRMPPPGFSNKPRG----GGNMDHVSRRRELDHNVNKEKG---------NHSELSKRNA 286

Query: 280 RRTSPNRHGVQGDASLRMQLSGQLDRPSPPVGSKLHSVPALDIEESLATLHGQGVEEDGR 101
             +S ++    G+ S  + L+ QLD P PP GS LHSV ALDIEESL   + + V EDG+
Sbjct: 287 FLSSESKSLRDGNGSRDLGLTRQLDHPGPPAGSNLHSVSALDIEESLLNFNAEMV-EDGK 345

Query: 100 GN 95
            +
Sbjct: 346 ND 347