BLASTX nr result

ID: Coptis23_contig00004667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004667
         (2329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus c...   237   9e-60
ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-50
ref|XP_003555628.1| PREDICTED: uncharacterized protein LOC100803...   200   2e-48
ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817...   200   2e-48
ref|XP_003592774.1| hypothetical protein MTR_1g115950 [Medicago ...   189   4e-45

>ref|XP_002525074.1| hypothetical protein RCOM_0745050 [Ricinus communis]
            gi|223535655|gb|EEF37321.1| hypothetical protein
            RCOM_0745050 [Ricinus communis]
          Length = 1517

 Score =  237 bits (605), Expect = 9e-60
 Identities = 216/641 (33%), Positives = 290/641 (45%), Gaps = 36/641 (5%)
 Frame = -3

Query: 1838 ISGIPSVDCHDVTGLKSSITLSGDKLRFDVHGNSDVTGSDDEKLNIFXXXXXXXXXXXXX 1659
            +S   SVD  D   LK       D +  D H N D T SDDEK+N+              
Sbjct: 715  VSEKKSVDNSDQCKLKFK-----DAVPPDAHRNGDGTVSDDEKINLSGDMLEEDSYGSEY 769

Query: 1658 XXXSNNRAFGIHKFGILVNKSHGCEDDEYEDGEVREPLLYTAAEDVVGPDGGIEPANCGV 1479
                N+    I +         G   D+YEDGEVREP L    E  +      E  + G 
Sbjct: 770  ESDGNSVPMDIEE--------DGRGQDDYEDGEVREPQLNAKVEGSICEKR--EDISQGD 819

Query: 1478 SNNMEYNDSVAAAGNGVDWSDVENRVVSVEDPHKAKSSHYSGLNIVQHSNNHDQCQSEVT 1299
            S++ + N +   A      S  E +  +VE+P +   +    ++ + H  N      +V+
Sbjct: 820  SDDTKVNSTELRADFHSSSSHAEGKDTNVEEPVETVKAALKDIDAI-HDRNTTDADKDVS 878

Query: 1298 CLQDTLAVELPTTGIGKNKLVMAAQRGPIDHAGMEDGIKGSGKVLLPAGAISASPGTSAG 1119
              +++ AV++  +   K KLV   +R P+D A  +D  K  G       A  A+ GT   
Sbjct: 879  -REESSAVDIVVSRADKRKLVKTIRRKPLDLATNKD--KALGTEQSTNQAACATQGTILA 935

Query: 1118 DDQGSRISQ----QENVKGINVEETNSPVESKSEPVVNGTEATKDVNSRGNQSRIINLDR 951
              QG+ ++      ENVK  N  E N     K E ++NG  A KD NS GNQSRIINL  
Sbjct: 936  ATQGTILAATQGTDENVK-TNGGEKNESALPKMETLINGDNAPKDANSGGNQSRIINLSI 994

Query: 950  ALSGLSPGRMRRI----LPSRIGRERYNDCLRSGDTLHPRGHRDEDSIDGRHNFERQRNQ 783
            A +  S G+ R I    L  R GRER  D    GD LHPRG RDE   DG   F R+R Q
Sbjct: 995  ASNMSSFGKTRSISSKPLSLRSGRERL-DVPLEGDRLHPRG-RDEAYNDGSQKFTRERYQ 1052

Query: 782  DQPVGNTGADYMDGRGRSEKRFDST-----NAAVMVAREGNGTVVGAS------------ 654
            +    N+  +++ GRGR   R DS      +    + R    T V  S            
Sbjct: 1053 ESR--NSRWNFIHGRGRLASRIDSLRNDRDSERDCIPRHKYATAVAGSDTEFVNYNMGSD 1110

Query: 653  ----------RKSLIHEMQDFRDXXXXXXXXXXXXXPASHGVQIIRRSARDISPDRCIGR 504
                      RK +  +   FR              PAS G+Q++RR  R I  D     
Sbjct: 1111 GVFAGGVRGGRKLVDDDTPIFRHFSSRRRSPGRRDGPASRGLQMVRRVPRSIDED----- 1165

Query: 503  ADSNMIGLRTEKKFMRGLPDEMMDDVYSRTQAQYQQFDDHFVRRERSFSPIHRKGNLHIP 324
             +S ++GLR  +K MRG PD+  +  YS TQ  Y+  D  FV+  RSFS + R+G   +P
Sbjct: 1166 -NSEVVGLRHTEKIMRGFPDDGEEHSYSHTQPPYEGLDGPFVQGTRSFS-VQRRG---LP 1220

Query: 323  QIXXXXXXXXXXXXXXXXXXXXPDGF-GRPELIRRRSPPFYRVKRIRSPHQRSCFAEDIT 147
            Q+                    PDGF G PEL  RRS P YR++R+RSP     F  D  
Sbjct: 1221 QMHSKSPIRSRSPGPWSSRRRSPDGFVGPPELPHRRS-PLYRMERMRSPDNPG-FPADRV 1278

Query: 146  GRRHGSPPYISRISNGMREMGASREHDNPRSFISTKSPSGR 24
            GRRH SP Y+SR  N +REM  SR+H +PRS IS +SP+GR
Sbjct: 1279 GRRHSSPSYLSR-PNDLREMDPSRDHGHPRSIISNRSPTGR 1318


>ref|XP_002316325.1| predicted protein [Populus trichocarpa] gi|222865365|gb|EEF02496.1|
            predicted protein [Populus trichocarpa]
          Length = 1317

 Score =  205 bits (522), Expect = 4e-50
 Identities = 186/630 (29%), Positives = 271/630 (43%), Gaps = 51/630 (8%)
 Frame = -3

Query: 1748 HGNSDVTGSDDEKLNIFXXXXXXXXXXXXXXXXSNNRAFGIHKFGILVNKSHGCEDDEYE 1569
            HGN + + +D+EK+N+                  ++ A  I +        H   + EYE
Sbjct: 593  HGNGEGSVTDEEKINLSGDMLEEDTYGSGYESDGHSMAMDIEE-------EH--REHEYE 643

Query: 1568 DGEVREPLLYTAAEDVVGPDGGIEPANCGVSNNMEYNDSVAAAGNGVDWSDVENRVVSVE 1389
            DGEVR+  L    E        +   NCG S + + N  +A   + +  S VE      E
Sbjct: 644  DGEVRDLHLQAVTECQKFEGKDVSHGNCGNSEHEKVNSELAGDDHHIS-SHVE------E 696

Query: 1388 DPHKAKSSHYSGLNIVQHSNNHDQCQSEVTC---------LQDTLAVELPTTGIGKNKLV 1236
            +  K K S           NN D  +  +T          ++ +  VE+P+ G  + +  
Sbjct: 697  NDSKIKVSE----------NNEDTVKECITTTTEDADNAIMKKSSTVEIPSCGEDQERAT 746

Query: 1235 MAAQRGPIDHAGMEDGIKGSGKVLLPAGAISASPGTSAGDDQGSRISQQENVKGINVEET 1056
               Q   +D +G +D + G G  L P   I+    T    +QGS     +N+K I+VE+ 
Sbjct: 747  TIIQIKSLDTSGQKDDLMGQGADLSPGQDITGGQETLVSIEQGS----DKNIKTIDVEKN 802

Query: 1055 NSPVESKSEPVVNGTEATKDVNSRGNQSRIINLDRALSGLSPGRMR----RILPSRIGRE 888
              P   + E  +NG +  KDV+S   +SRIINL RA +  SPG+ R    R LPS   RE
Sbjct: 803  ELP---EVEASLNGRDMAKDVSS--GRSRIINLSRASNSSSPGKTRSISGRTLPSH--RE 855

Query: 887  RYNDCLRSGDTLHPRGHRDEDSIDGRHNFERQRNQDQPVGNTGADYMDGRGRSEKRFDS- 711
            R  D L  G  LHPRG RDE+ IDG   F R+R+Q+    N+  +++ GRGR   R D+ 
Sbjct: 856  RLPDELLEGGKLHPRG-RDENYIDGPRRFSRERHQEHFPRNSRMNFVCGRGRMSSRIDTL 914

Query: 710  ---------------------------------TNAAVMVAREGNGTVVGASR---KSLI 639
                                              +++V      +G  VG +R   K L 
Sbjct: 915  RGDRDSERDYASEFYGSSDFAVRRHKYASAVGEADSSVNYNTGPDGAFVGTARGGRKLLD 974

Query: 638  HEMQDFRDXXXXXXXXXXXXXPASHGVQIIRRSARDISPDRCIGRADSNMIGLRTEKKFM 459
             E   FR              PA  G Q++ R  R++  D       S + G+R  +  M
Sbjct: 975  DETPVFRHVPSRRRSPRGRYGPAVRGTQMLHRVPRNVGED------GSEVTGVRHAEN-M 1027

Query: 458  RGLPDEMMDDVYSRTQAQYQQFDDHFVRRERSFSPIHRKGNLHIPQI-XXXXXXXXXXXX 282
            RG PD+  D  ++R Q  Y+  D HFV+  R++S + R+     PQI             
Sbjct: 1028 RGFPDDSTDQAFTRPQPSYEGLDGHFVQGTRNYSSVQRRTP---PQIRSKSPIRSRSPCP 1084

Query: 281  XXXXXXXXPDGFGRPELIRRRSPPFYRVKRIRSPHQRSCFAEDITGRRHGSPPYISRISN 102
                    PDGFG       R  P YR+ R+RSP     F  ++  RR+GSPP++SR  N
Sbjct: 1085 WSSARRRSPDGFGATSEFSSRRSPIYRIGRVRSPDHPG-FPREMVVRRNGSPPFLSR-PN 1142

Query: 101  GMREMGASREHDNPRSFISTKSPSGRTFSR 12
              REM   R+H +PRS IS +  +GR   R
Sbjct: 1143 DTREMDLGRDHGHPRSIISNRDQTGRVLLR 1172


>ref|XP_003555628.1| PREDICTED: uncharacterized protein LOC100803295 [Glycine max]
          Length = 1378

 Score =  200 bits (508), Expect = 2e-48
 Identities = 188/603 (31%), Positives = 267/603 (44%), Gaps = 39/603 (6%)
 Frame = -3

Query: 1745 GNSDVTGSDDEKLNIFXXXXXXXXXXXXXXXXSNNRAFGIHKFGILVNKSHGCEDDEYED 1566
            GN +   SD+EK+ +                   NRA  I      V+     EDD+YED
Sbjct: 645  GNGEGCVSDEEKITL-STDMLEDDSYGSDCESDENRAVTIG-----VDTERYVEDDDYED 698

Query: 1565 GEVREPLLYTAAEDVVGPDGGIEPANCGVSNNMEYNDSVAAAGNGVDWSDVENRVVSVED 1386
            GEVREPL  + AED +     +E  +C    N +    + +      +  VEN  ++   
Sbjct: 699  GEVREPLDPSTAEDTICEVREVEHPDCSNFVNKQMEKGMVSGDCPTSYQLVENDNITAIQ 758

Query: 1385 PHKAKSSHYSGLNIVQHSNNHDQCQSEVTCLQDTLAVELPTTGI-GKNKLVMAAQRGPID 1209
                 ++    ++I  H  +       V C+Q++L  E       G N L M A      
Sbjct: 759  SEI--NNEVVDMDIEMHERSGKVIDKSV-CVQESLDDEKSNIAAHGANVLQMKA------ 809

Query: 1208 HAGMEDGIKGSGKVLLPAGAISASPGTSAGDDQGSRISQQENVKGINVEETNSPVESKSE 1029
               + DG      ++  + +  A+ G+   D Q +     E VK  ++ +         E
Sbjct: 810  -LDLLDGKNVCEALVAESPSNQATNGSHGVDFQCA----DEVVKTADIVKQTDLDFETME 864

Query: 1028 PVVNGTEATKDVNSRGNQSRIINLDRALSGLSPGRMR----RILPSRIGRERYNDCLRSG 861
               N  +A KDVN+ GN  RII L RA S  SPG+ R    R L SR GR+  +D L  G
Sbjct: 865  VSANADDAAKDVNNGGNPGRIIVLSRATSSSSPGKTRPISGRSLSSRAGRDVLSDSL-DG 923

Query: 860  DTLHPRGHRDEDSIDGRHNFERQRNQDQPVGNTGADYMDGRGRSEKRFDSTNAAVMVARE 681
            D LH RG RDE  IDG H F R+R+QD    N+  +++ GRGR   R DS  +     RE
Sbjct: 924  DKLH-RG-RDEVFIDGPHKFSRERHQDISPRNSRFNFVRGRGRLNSRLDSVRSEWESDRE 981

Query: 680  GNGTVVGAS---RKSLIHEMQDFRDXXXXXXXXXXXXXPASHG----------------- 561
             +G         R         F D                +G                 
Sbjct: 982  FSGEFYNGPSQFRGPRPKYAPAFADTDMEYNNVAPDGSYVGNGRLGRKPLNDGSYIAPRR 1041

Query: 560  --------VQIIRRSARDISPDRCIGRADSNMIGLRTEKKFMRGLPDEMMDDVYSRTQAQ 405
                    +QI  R+ R+ISP+RCIG   S+++G+R   KFMRGLP++ MD +++R+Q  
Sbjct: 1042 RSPGGRDGIQIGHRNPRNISPNRCIGDG-SDLVGVRHNDKFMRGLPEDNMDAMFTRSQT- 1099

Query: 404  YQQFDDHFVRRERSFSPIHRKGNLHIP-----QIXXXXXXXXXXXXXXXXXXXXPDGF-G 243
            ++  D  F R  R+FS + R+G   I      +                     PDGF G
Sbjct: 1100 FEGMDGRFTRGSRNFSSMQRRGPPRIRSKSPIRSRSRSPGPWSSPRRRSPRRRSPDGFGG 1159

Query: 242  RPELIRRRSPPFYRVKRIRSPHQRSCFAEDITGRRHGSPPYISRISNGMREMGASREHDN 63
             PEL  RRS PFYRV R+RSP  R  F  +   RRHGSP ++SR SN MR++ ++R+H +
Sbjct: 1160 HPELSHRRS-PFYRVDRMRSP-DRPVFPAERVVRRHGSPSFMSRPSNDMRDIDSARDHGH 1217

Query: 62   PRS 54
            PRS
Sbjct: 1218 PRS 1220


>ref|XP_003535782.1| PREDICTED: uncharacterized protein LOC100817471 [Glycine max]
          Length = 1396

 Score =  200 bits (508), Expect = 2e-48
 Identities = 192/620 (30%), Positives = 268/620 (43%), Gaps = 56/620 (9%)
 Frame = -3

Query: 1745 GNSDVTGSDDEKLNIFXXXXXXXXXXXXXXXXSNNRAFGIHKFGILVNKSHGCEDDEYED 1566
            GN +   SD+EK+ +                  N      H   I V+     EDD+YED
Sbjct: 645  GNGEGCASDEEKITLSTDMLEDDSYDSDSESDEN------HAVTIAVDTECYVEDDDYED 698

Query: 1565 GEVREPLLYTAAEDVVG------PDG---------GIEPANCGVSNNMEYNDSVAAAGNG 1431
            GEVREPL  + AEDV        PD          G+   +C  S  +   +++ A    
Sbjct: 699  GEVREPLDPSTAEDVCEVREVEHPDSNFVNKQMEKGMVSGDCPTSYQVVEKNNMTAIQ-- 756

Query: 1430 VDWSDVENRVVSVEDPHKAKSSHYSGLNIVQHSNNHDQCQSEVTCLQDTLAVELPTTGIG 1251
               S++ N VV ++     +S      N+               C+Q++L  E       
Sbjct: 757  ---SEINNEVVDMDIEMHERSGKVVDKNV---------------CVQESLDDEKCNIATH 798

Query: 1250 KNKLVMAAQRGPIDHAGMEDGIKGSGKVLLPAGAISASPGTSAGDDQGSRISQQENVKGI 1071
             NK V   Q   +D   + +G      ++  + +  A+ G+   D Q +     E VK  
Sbjct: 799  GNKPVNVLQMKALD---LLEGKNVCEALVTESPSNQATNGSHGVDVQCA----DEVVKTT 851

Query: 1070 NVEETNSPVESKSEPVVNGTEATKDVNSRGNQSRIINLDRALSGLSPGRMR----RILPS 903
            ++ +         E   N  +A KDVN+ GN  RII+L RA S  SPG+ R    R L S
Sbjct: 852  DIVKQTDLDFETMEVSANADDAAKDVNNGGNLGRIIDLSRATSSSSPGKTRPMSGRSLSS 911

Query: 902  RIGRERYNDCLRSGDTLHPRGHRDEDSIDGRHNFERQRNQDQPVGNTGADYMDGRGRSEK 723
            R GR+  +D L  GD LH RG RDE  IDG H F R+R+QD     T  +++ GRGR   
Sbjct: 912  RAGRDVLSDTL-DGDKLH-RG-RDEVYIDGPHKFSRERHQDISPRKTRMNFVRGRGRLNN 968

Query: 722  RFDSTNAAVMVAREGNGTVVGAS---RKSLIHEMQDFRDXXXXXXXXXXXXXPASHG--- 561
            R DS        RE +G         R         F D                +G   
Sbjct: 969  RLDSVRNDWESDREFSGEFYNGPSQFRGPRPKYASAFADTDMEYNNVAPDGSYVGNGRLG 1028

Query: 560  ----------------------VQIIRRSARDISPDRCIGRADSNMIGLRTEKKFMRGLP 447
                                  +QI  R+ R+ISP+RCIG   S+++G+R  +KFMR LP
Sbjct: 1029 RKPLNDGSYIAPRRRSSGGRDGIQIGHRNPRNISPNRCIGDG-SDLVGVRHNEKFMRSLP 1087

Query: 446  DEMMDDVYSRTQAQYQQFDDHFVRRERSFSPIHRKGNLHIPQI--------XXXXXXXXX 291
            ++ MD +++R Q  ++  D  F R  R+FS + R+G    PQI                 
Sbjct: 1088 EDNMDAMFTRPQT-FEGMDGRFTRGSRNFSSMQRRGP---PQIRSKSPIRSRSRSPGPWS 1143

Query: 290  XXXXXXXXXXXPDGF-GRPELIRRRSPPFYRVKRIRSPHQRSCFAEDITGRRHGSPPYIS 114
                       PDGF G PEL  RRS PFYRV R+RSP  R  F  +   RRHGSP ++S
Sbjct: 1144 SPRRRSPRRRSPDGFGGHPELTHRRS-PFYRVDRMRSP-DRPVFPAERVVRRHGSPSFMS 1201

Query: 113  RISNGMREMGASREHDNPRS 54
            R SN MR+M ++R+H +PRS
Sbjct: 1202 RPSNDMRDMDSARDHGHPRS 1221


>ref|XP_003592774.1| hypothetical protein MTR_1g115950 [Medicago truncatula]
            gi|355481822|gb|AES63025.1| hypothetical protein
            MTR_1g115950 [Medicago truncatula]
          Length = 1370

 Score =  189 bits (479), Expect = 4e-45
 Identities = 179/593 (30%), Positives = 257/593 (43%), Gaps = 55/593 (9%)
 Frame = -3

Query: 1625 HKFGILVNKSHGCEDDEYEDGEVREPLLYTAAEDVV-------GPDGGI---EPANCGVS 1476
            H   + V+     EDD+YEDGEVREPL  +  ED +        PD      +P   GV 
Sbjct: 656  HAVTVAVDTERYTEDDDYEDGEVREPLEPSKVEDTICEVRETEHPDLSNYDNKPVEKGVV 715

Query: 1475 NNMEYNDSVAAAGNGVDWSDVENRVVSVEDPHKAKSSHYSGLNIVQHSNNHDQCQSEVTC 1296
             + +Y  S     N  + + + N +VS +D              +Q +    +   +  C
Sbjct: 716  VSSDYPTSSRVMEND-NMTVIHNEIVSKDDVD------------IQMNEKPGKVMDKNVC 762

Query: 1295 LQDTLAVELPTTGIGKNKLVMAAQRGPIDHAGMEDGIKGSGKVLLPAGAISASPGTSAGD 1116
            +Q+++  E       K   V  +Q  P+D            ++++     +  P   A D
Sbjct: 763  VQESMDGEKSDIAADKRP-VNVSQGKPLDLLE---------RIIVSETQETEQPCNQATD 812

Query: 1115 DQG--SRISQQENVKGINVEETNSPVESKSEPVVNGTEATKDVNSRGNQSRIINLDRALS 942
             +     +   E VK  +          K E   N  + TKDV +  NQ RII+L RA S
Sbjct: 813  GRHVIDVLCADEVVKTTDTVRETDLDFPKMEGSANTEDITKDVTNSSNQGRIIDLSRAAS 872

Query: 941  GLSPGRMR----RILPSRIGRERYNDCLRSGDTLHPRGHRDEDSIDGRHNFERQRNQDQP 774
              SP + R    R LP+R GR+ + D L  GD L+ RG RDE  ID  H F R+R+QD  
Sbjct: 873  SSSPSKTRPISGRSLPTRAGRDVFPDTL-DGDKLY-RG-RDEVYIDAPHRFSRERHQDMS 929

Query: 773  VGNTGADYMDGRGRSEKR---------------FDSTNAAVMVAREGNGTVVGASRKSLI 639
              N+  ++  GRGR   R               ++  N     AR    + +  +     
Sbjct: 930  TRNSRLNFGRGRGRVNSRGRGDWESEREYSGEFYNGPNQQYRGARSKYSSAIADNDLEYN 989

Query: 638  HEMQDFRDXXXXXXXXXXXXXPASH-------------GVQIIRRSARDISPD-RCIGRA 501
            +   D  D               S+             G+Q+  R+ R +SP  RCIG  
Sbjct: 990  NAGPD--DSYVNGRLGRKPLNDGSYIAPRRRSPGGVRDGIQMGHRNQRPVSPSGRCIGGD 1047

Query: 500  DSNMIGLRTEKKFMRGLPDEMMDDVYSRTQAQYQQFDDHFVR---RERSFSPIHRKGNLH 330
             S + G+R  +KFMRG  D+ +D VY+R Q Q++  D  F R   R R+FS + R+G L 
Sbjct: 1048 GSELGGMRHSEKFMRGFNDDTLDSVYTRPQ-QFEGMDGRFSRGRGRGRNFSSMQRRGGLS 1106

Query: 329  IPQIXXXXXXXXXXXXXXXXXXXXP------DGFG-RPELIRRRSPPFYRVKRIRSPHQR 171
              +                            DGFG  PE+  RRSP  YRV R+RSP  R
Sbjct: 1107 RMRSKSPIRSRSRSPGQWTSPRRRSPRRRSPDGFGGHPEITHRRSP-LYRVDRMRSP-DR 1164

Query: 170  SCFAEDITGRRHGSPPYISRISNGMREMGASREHDNPRSFISTKSPSGRTFSR 12
              F  +   RRHGSP +ISR SN MR++ ++R+H +PRS IS +SPSGR   R
Sbjct: 1165 PVFTGERVVRRHGSPQFISRPSNDMRDIDSARDHGHPRSVISNRSPSGRILIR 1217


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