BLASTX nr result

ID: Coptis23_contig00004666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004666
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14956.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-...   119   3e-25
ref|XP_004138083.1| PREDICTED: leucine-rich repeat-containing pr...   113   2e-23
ref|XP_002321633.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002511324.1| leucine-rich repeat-containing protein, puta...   108   3e-22

>emb|CBI14956.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/111 (60%), Positives = 79/111 (71%)
 Frame = -1

Query: 470 QISALPITFGRLHSLTKLNLEQNPLKIPPMETVEKGVEAVKEFMAKRXXXXXXXXXERKS 291
           QI ALP TFGRL +L KLNL+QNPL IPPME V +GVEAVK FMAKR         E+KS
Sbjct: 311 QIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFMAKR-WLDILVEEEQKS 369

Query: 290 VLNASNQEQTGWLTRSTLLLKNLSSVISESVSGYMGAGQKSQRDPFLDQQL 138
           +L    Q +TGWLTRST  L ++ S +S+SVSGY+G G    RDP+LDQQL
Sbjct: 370 LLEVKEQTETGWLTRSTSWLGSVVSGVSQSVSGYLGPG---PRDPYLDQQL 417


>ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Vitis vinifera]
          Length = 517

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/111 (60%), Positives = 79/111 (71%)
 Frame = -1

Query: 470 QISALPITFGRLHSLTKLNLEQNPLKIPPMETVEKGVEAVKEFMAKRXXXXXXXXXERKS 291
           QI ALP TFGRL +L KLNL+QNPL IPPME V +GVEAVK FMAKR         E+KS
Sbjct: 411 QIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFMAKR-WLDILVEEEQKS 469

Query: 290 VLNASNQEQTGWLTRSTLLLKNLSSVISESVSGYMGAGQKSQRDPFLDQQL 138
           +L    Q +TGWLTRST  L ++ S +S+SVSGY+G G    RDP+LDQQL
Sbjct: 470 LLEVKEQTETGWLTRSTSWLGSVVSGVSQSVSGYLGPG---PRDPYLDQQL 517


>ref|XP_004138083.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus] gi|449526497|ref|XP_004170250.1| PREDICTED:
           leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 523

 Score =  113 bits (282), Expect = 2e-23
 Identities = 63/111 (56%), Positives = 75/111 (67%)
 Frame = -1

Query: 470 QISALPITFGRLHSLTKLNLEQNPLKIPPMETVEKGVEAVKEFMAKRXXXXXXXXXERKS 291
           QI ALP TFG L +L KLN+EQNPL +PPME V KG +AV+ FM+KR         +RK 
Sbjct: 415 QIHALPDTFGHLENLKKLNVEQNPLTVPPMEVVSKGPDAVRTFMSKR-WLEILQEEDRKR 473

Query: 290 VLNASNQEQTGWLTRSTLLLKNLSSVISESVSGYMGAGQKSQRDPFLDQQL 138
            L    Q QTGWLTRST  LK   S +SE+VSG +G+  KS RDP+LDQQL
Sbjct: 474 TLEMDEQTQTGWLTRSTSWLKTYVSGVSETVSGIVGS-PKSPRDPYLDQQL 523


>ref|XP_002321633.1| predicted protein [Populus trichocarpa] gi|222868629|gb|EEF05760.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  110 bits (276), Expect = 9e-23
 Identities = 63/111 (56%), Positives = 77/111 (69%)
 Frame = -1

Query: 470 QISALPITFGRLHSLTKLNLEQNPLKIPPMETVEKGVEAVKEFMAKRXXXXXXXXXERKS 291
           QISALP +FGRL +LTKLNL+QNPL IPP E +++GVEAVK FMAKR         ERKS
Sbjct: 408 QISALPDSFGRLDNLTKLNLDQNPLVIPPPEVIKEGVEAVKIFMAKR-WIDILVEEERKS 466

Query: 290 VLNASNQEQTGWLTRSTLLLKNLSSVISESVSGYMGAGQKSQRDPFLDQQL 138
            L    Q QTGWLT ST  LK  ++ +S +VSG++    +  RDP+LDQQL
Sbjct: 467 TLEVQEQAQTGWLTLSTSWLKTYATGVSATVSGFL--SPRVPRDPYLDQQL 515


>ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223550439|gb|EEF51926.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/111 (53%), Positives = 78/111 (70%)
 Frame = -1

Query: 470 QISALPITFGRLHSLTKLNLEQNPLKIPPMETVEKGVEAVKEFMAKRXXXXXXXXXERKS 291
           QI  LP +FGRL +LTKLNL+QNPL +PP E V++GVEAVK FMAKR         ERKS
Sbjct: 410 QIETLPDSFGRLDNLTKLNLDQNPLILPPPEVVKEGVEAVKIFMAKR-WLDILVEEERKS 468

Query: 290 VLNASNQEQTGWLTRSTLLLKNLSSVISESVSGYMGAGQKSQRDPFLDQQL 138
           ++    Q Q+GWLTRST  LK+ ++ ++E+VS Y+    +S RD +L+QQL
Sbjct: 469 MVEVQEQAQSGWLTRSTSWLKSYAANVTENVSEYLSPRSRSPRDSYLNQQL 519


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