BLASTX nr result

ID: Coptis23_contig00004661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004661
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mito...   359   5e-97
ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mito...   350   2e-94
ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1...   348   7e-94
emb|CAN61438.1| hypothetical protein VITISV_033771 [Vitis vinifera]   338   1e-90
ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [...   337   2e-90

>ref|XP_003530527.1| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           [Glycine max]
          Length = 282

 Score =  359 bits (921), Expect = 5e-97
 Identities = 178/228 (78%), Positives = 196/228 (85%), Gaps = 2/228 (0%)
 Frame = +3

Query: 3   QSEFRWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHL 182
           ++EFRWWD +D+FLLLGAVPFPKDVP LK+LGVGGVITLNEPYETLVP+SLY AHGI+HL
Sbjct: 55  EAEFRWWDQIDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHL 114

Query: 183 VIPTRDYLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 362
           VIPTRDYLFAPS  DINRAV FIH+NA CG+TTYVHCKAGRGRSTTIVLCY+VEYKHMTP
Sbjct: 115 VIPTRDYLFAPSFVDINRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYMVEYKHMTP 174

Query: 363 AAALEYVRSIRPRVLLAPSQWKAVQEFGKCRPSLTASSFSGDEVLITKADLEGYHNISDA 542
           AAALEYVRS RPRVLLAPSQWKAVQ + K RPS    S SGD VLITKADLEGYH+  DA
Sbjct: 175 AAALEYVRSRRPRVLLAPSQWKAVQNYNKRRPSPLPYSPSGDAVLITKADLEGYHSTCDA 234

Query: 543 TKKLNIVAKAVKAKPMIARLSCLFAALKVTGSNSPVASRLP--QIRAC 680
             +L IV K  K KPMIARLSCLFA+LKV+GS+ P+  RLP  + RAC
Sbjct: 235 GMELAIVPKMPKTKPMIARLSCLFASLKVSGSSVPMTRRLPVSESRAC 282


>ref|XP_002283341.2| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           isoform 1 [Vitis vinifera] gi|297738731|emb|CBI27976.3|
           unnamed protein product [Vitis vinifera]
          Length = 280

 Score =  350 bits (898), Expect = 2e-94
 Identities = 180/228 (78%), Positives = 197/228 (86%), Gaps = 2/228 (0%)
 Frame = +3

Query: 3   QSEFRWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHL 182
           Q+EFRWWD VDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLY AH I+HL
Sbjct: 54  QAEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYHAHEIDHL 113

Query: 183 VIPTRDYLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 362
           VIPTRDYLFAPS  DI+RAVDFIH+NA  GRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP
Sbjct: 114 VIPTRDYLFAPSFVDISRAVDFIHKNASSGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 173

Query: 363 AAALEYVRSIRPRVLLAPSQWKAVQEFGKCRPSLTAS-SFSGDEVLITKADLEGYH-NIS 536
           AAALEYVRS RPRVLLAPSQWKAVQE+ K + + T S S SGD VLITKADLEGY  N  
Sbjct: 174 AAALEYVRSRRPRVLLAPSQWKAVQEYNKRQLATTTSYSPSGDAVLITKADLEGYQSNCD 233

Query: 537 DATKKLNIVAKAVKAKPMIARLSCLFAALKVTGSNSPVASRLPQIRAC 680
           DA K+L I+A+ V+A+PM ARLSCLFA+LK +G   PV+ +L + RAC
Sbjct: 234 DAGKELAIIARVVRARPM-ARLSCLFASLKFSGGCGPVSRQLSEARAC 280


>ref|XP_002514193.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223546649|gb|EEF48147.1| Protein-tyrosine phosphatase
           mitochondrial 1, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 284

 Score =  348 bits (894), Expect = 7e-94
 Identities = 174/229 (75%), Positives = 194/229 (84%), Gaps = 3/229 (1%)
 Frame = +3

Query: 3   QSEFRWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHL 182
           QSEFRWWD +DQ+LLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVP+SLY AHGIEHL
Sbjct: 57  QSEFRWWDEIDQYLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPSSLYHAHGIEHL 116

Query: 183 VIPTRDYLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 362
           VIPTRDYLFAPS  +I++AVDFIH+NA CG TTYVHCKAGRGRSTTIVLCYLVEYKHM+P
Sbjct: 117 VIPTRDYLFAPSFVNISQAVDFIHKNASCGATTYVHCKAGRGRSTTIVLCYLVEYKHMSP 176

Query: 363 AAALEYVRSIRPRVLLAPSQWKAVQEFGKCRPSLTASSFSGDEVLITKADLEGYHNISD- 539
             ALEYVRS RPRVLLAPSQWKAVQE+ + RP  TA S S D VLITKADLEGYH+  D 
Sbjct: 177 MTALEYVRSRRPRVLLAPSQWKAVQEYSRRRPPPTAHSPSRDAVLITKADLEGYHSACDD 236

Query: 540 --ATKKLNIVAKAVKAKPMIARLSCLFAALKVTGSNSPVASRLPQIRAC 680
               K+L IV++  K +PM+ARLSCLFA+LKV+G   P   R+P+ RAC
Sbjct: 237 DAIGKELAIVSR-TKTRPMMARLSCLFASLKVSGVCGPATGRMPEARAC 284


>emb|CAN61438.1| hypothetical protein VITISV_033771 [Vitis vinifera]
          Length = 271

 Score =  338 bits (866), Expect = 1e-90
 Identities = 180/247 (72%), Positives = 196/247 (79%), Gaps = 21/247 (8%)
 Frame = +3

Query: 3   QSEFRWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHL 182
           Q+EFRWWD VDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLY AH I+HL
Sbjct: 26  QAEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYHAHEIDHL 85

Query: 183 VIPTRDYLFAPSASDINRAVDFI-------------------HRNACCGRTTYVHCKAGR 305
           VIPTRDYLFAPS  DI+RAVDFI                   H NA  GRTTYVHCKAGR
Sbjct: 86  VIPTRDYLFAPSFVDISRAVDFIHSEQFFFDFTSASSVILRCHENASSGRTTYVHCKAGR 145

Query: 306 GRSTTIVLCYLVEYKHMTPAAALEYVRSIRPRVLLAPSQWKAVQEFGKCRPSLTAS-SFS 482
           GRSTTIVLCYLVEYKHMTPAAALEYVRS RPRVLLAPSQWKAVQE+ K + + T S S S
Sbjct: 146 GRSTTIVLCYLVEYKHMTPAAALEYVRSRRPRVLLAPSQWKAVQEYNKRQLATTTSYSPS 205

Query: 483 GDEVLITKADLEGYH-NISDATKKLNIVAKAVKAKPMIARLSCLFAALKVTGSNSPVASR 659
           GD VLITKADLEGY  N  DA K+L I+A+ V+A+PM ARLSCLFA+LK +G   PV+ +
Sbjct: 206 GDAVLITKADLEGYQSNCDDAGKELAIIARVVRARPM-ARLSCLFASLKFSGGCGPVSRQ 264

Query: 660 LPQIRAC 680
           L + RAC
Sbjct: 265 LSEARAC 271


>ref|XP_003630688.1| Protein-tyrosine phosphatase mitochondrial [Medicago truncatula]
           gi|355524710|gb|AET05164.1| Protein-tyrosine phosphatase
           mitochondrial [Medicago truncatula]
          Length = 309

 Score =  337 bits (865), Expect = 2e-90
 Identities = 176/255 (69%), Positives = 194/255 (76%), Gaps = 29/255 (11%)
 Frame = +3

Query: 3   QSEFRWWDAVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNEPYETLVPTSLYRAHGIEHL 182
           ++EFRWWD +D+FLLLGAVPFPKDVP LK LGVGGVITLNEPYETLVP+SLY AHGI+HL
Sbjct: 55  ETEFRWWDQIDEFLLLGAVPFPKDVPHLKNLGVGGVITLNEPYETLVPSSLYHAHGIDHL 114

Query: 183 VIPTRDYLFAPSASDINRAVDFIHRNACCGRTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 362
           VIPTRDYLFAPS  DI+RAV FIH NA CG+TTYVHCKAGRGRSTTIVLCYLVEYKHMTP
Sbjct: 115 VIPTRDYLFAPSFVDISRAVQFIHHNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTP 174

Query: 363 AAALEYVRSIRPRVLLAPSQWKAVQEFGK-------CRPSLTA----------------- 470
            AALEYVRS RPRVLLAPSQWKAVQ + K       C PS  A                 
Sbjct: 175 VAALEYVRSRRPRVLLAPSQWKAVQNYYKQRPCPLPCSPSGDAVLKHKDPVQNYNKQRPC 234

Query: 471 ---SSFSGDEVLITKADLEGYHNISDATKKLNIVAKAVKAKPMIARLSCLFAALKVTGSN 641
               S SGD V+ITK DLEGYH+ SD + +L IV K  K KPMIARLSCLFA+LKV+GS+
Sbjct: 235 PLPHSPSGDTVVITKDDLEGYHSTSDTSIELAIVPKVPKTKPMIARLSCLFASLKVSGSS 294

Query: 642 SPVASRLP--QIRAC 680
            P+  RLP  + RAC
Sbjct: 295 VPMTRRLPVSESRAC 309


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