BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004643
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana...   250   1e-64
gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis t...   250   1e-64
ref|XP_002877962.1| hypothetical protein ARALYDRAFT_485818 [Arab...   249   3e-64
ref|XP_003538348.1| PREDICTED: 50S ribosomal protein L17, chloro...   246   2e-63
gb|AFK44729.1| unknown [Lotus japonicus]                              246   2e-63

>ref|NP_190989.1| 50S ribosomal protein L17 [Arabidopsis thaliana]
           gi|75311820|sp|Q9M385.1|RK17_ARATH RecName: Full=50S
           ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor
           gi|14030669|gb|AAK53009.1|AF375425_1
           AT3g54210/F24B22_170 [Arabidopsis thaliana]
           gi|6822067|emb|CAB70995.1| ribosomal protein L17-like
           protein [Arabidopsis thaliana]
           gi|21700779|gb|AAM70513.1| AT3g54210/F24B22_170
           [Arabidopsis thaliana] gi|22530904|gb|AAM96956.1|
           ribosomal protein L17-like protein [Arabidopsis
           thaliana] gi|23198410|gb|AAN15732.1| ribosomal protein
           L17-like protein [Arabidopsis thaliana]
           gi|332645678|gb|AEE79199.1| 50S ribosomal protein L17
           [Arabidopsis thaliana]
          Length = 211

 Score =  250 bits (639), Expect = 1e-64
 Identities = 123/128 (96%), Positives = 126/128 (98%)
 Frame = +2

Query: 5   FVIIDNGGRIYAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 184
           F I+D GGRIYAMRHGR+VPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV
Sbjct: 84  FKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 143

Query: 185 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA 364
           DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNA
Sbjct: 144 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNA 203

Query: 365 PMAYIELV 388
           PMAYIELV
Sbjct: 204 PMAYIELV 211


>gb|AAM63452.1| ribosomal protein L17-like protein [Arabidopsis thaliana]
          Length = 203

 Score =  250 bits (639), Expect = 1e-64
 Identities = 123/128 (96%), Positives = 126/128 (98%)
 Frame = +2

Query: 5   FVIIDNGGRIYAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 184
           F I+D GGRIYAMRHGR+VPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV
Sbjct: 76  FKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 135

Query: 185 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA 364
           DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNA
Sbjct: 136 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNA 195

Query: 365 PMAYIELV 388
           PMAYIELV
Sbjct: 196 PMAYIELV 203


>ref|XP_002877962.1| hypothetical protein ARALYDRAFT_485818 [Arabidopsis lyrata subsp.
           lyrata] gi|297323800|gb|EFH54221.1| hypothetical protein
           ARALYDRAFT_485818 [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  249 bits (636), Expect = 3e-64
 Identities = 122/128 (95%), Positives = 126/128 (98%)
 Frame = +2

Query: 5   FVIIDNGGRIYAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 184
           F I+D GGRIYAMRHGR+VPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV
Sbjct: 84  FKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 143

Query: 185 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA 364
           DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP+RYGERNGGYTRIIRTLPRRGDNA
Sbjct: 144 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNA 203

Query: 365 PMAYIELV 388
           PMAYIEL+
Sbjct: 204 PMAYIELL 211


>ref|XP_003538348.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Glycine
           max]
          Length = 214

 Score =  246 bits (629), Expect = 2e-63
 Identities = 121/129 (93%), Positives = 127/129 (98%)
 Frame = +2

Query: 2   SFVIIDNGGRIYAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKF 181
           SF IIDNGGR+ AMRHGRKVPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RKF
Sbjct: 86  SFTIIDNGGRVSAMRHGRKVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKF 145

Query: 182 VDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDN 361
           VDKMITLAKDGSLHKRRQALG+IYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDN
Sbjct: 146 VDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDN 205

Query: 362 APMAYIELV 388
           APMAYIELV
Sbjct: 206 APMAYIELV 214


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  246 bits (628), Expect = 2e-63
 Identities = 119/128 (92%), Positives = 127/128 (99%)
 Frame = +2

Query: 5   FVIIDNGGRIYAMRHGRKVPKLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFV 184
           F IIDNGGR+YAMRHGR+VPKLNRPPDQR+AL+RGLTTQLLK+GRIKTTRARASA+RK+V
Sbjct: 89  FTIIDNGGRVYAMRHGRRVPKLNRPPDQRRALIRGLTTQLLKYGRIKTTRARASAIRKYV 148

Query: 185 DKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA 364
           DKMITLAKDGSLHKRRQALG+IYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA
Sbjct: 149 DKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPERYGERNGGYTRIIRTLPRRGDNA 208

Query: 365 PMAYIELV 388
           PMAYIELV
Sbjct: 209 PMAYIELV 216