BLASTX nr result

ID: Coptis23_contig00004635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004635
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c...    59   5e-07
emb|CBI17960.3| unnamed protein product [Vitis vinifera]               58   9e-07
emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    58   9e-07
ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
gb|AAF99773.1|AC003981_23 F22O13.29 [Arabidopsis thaliana]             56   3e-06

>ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis]
           gi|223538751|gb|EEF40351.1| hypothetical protein
           RCOM_0607680 [Ricinus communis]
          Length = 1162

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = -3

Query: 105 HFKLSDVHGMCEACLFSSVTEKKSNSETYRLLVGK 1
           H KL DVHGMCE+CLFS  T  KSN+ETYRLLVGK
Sbjct: 97  HNKLVDVHGMCESCLFSFATINKSNAETYRLLVGK 131


>emb|CBI17960.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -3

Query: 105 HFKLSDVHGMCEACLFSSVTEKKSNSETYRLLVGK 1
           H KL+DVHGMCE CLFSS T KKSNSET+RLLVGK
Sbjct: 97  HDKLADVHGMCEECLFSS-TIKKSNSETHRLLVGK 130


>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -3

Query: 105 HFKLSDVHGMCEACLFSSVTEKKSNSETYRLLVGK 1
           H KL+DVHGMCE CLFSS T KKSNSET+RLLVGK
Sbjct: 97  HDKLADVHGMCEECLFSS-TIKKSNSETHRLLVGK 130


>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 105 HFKLSDVHGMCEACLFSSVTEKKSNSETYRLLVGK 1
           H  L DVHGMCE CLFS  T  KSN+ETYRLLVGK
Sbjct: 97  HNNLVDVHGMCENCLFSFATTNKSNAETYRLLVGK 131


>gb|AAF99773.1|AC003981_23 F22O13.29 [Arabidopsis thaliana]
          Length = 1079

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/35 (74%), Positives = 27/35 (77%)
 Frame = -3

Query: 105 HFKLSDVHGMCEACLFSSVTEKKSNSETYRLLVGK 1
           H KL DV GMCE CLFS  T  KSN+ETYRLLVGK
Sbjct: 87  HGKLVDVRGMCETCLFSFATTNKSNAETYRLLVGK 121


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