BLASTX nr result

ID: Coptis23_contig00004633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004633
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 compone...   503   e-140
gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]    496   e-138
dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vul...   494   e-138
sp|P52903.1|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 c...   494   e-138
gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petun...   493   e-137

>ref|XP_003519292.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-1,
           mitochondrial-like [Glycine max]
          Length = 396

 Score =  503 bits (1294), Expect = e-140
 Identities = 236/271 (87%), Positives = 258/271 (95%)
 Frame = +3

Query: 6   HNLKSGHGGSLVEAFSELMGRKDGCSKGKGGSMHFYKKESGFFGGHGIVGAQVPLGCGLA 185
           H +  G GG+L+E F+ELMGRK+GCSKGKGGSMHFYKKESGF+GGHGIVGAQVPLGCGLA
Sbjct: 126 HCIFVGRGGTLLEVFAELMGRKEGCSKGKGGSMHFYKKESGFYGGHGIVGAQVPLGCGLA 185

Query: 186 FAQKYKKDGCVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 365
           FAQKY KD  VTFA+YGDGAANQGQLFEALN+AALWDLPAILVCENNHYGMGTAEWRAAK
Sbjct: 186 FAQKYSKDESVTFAMYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAK 245

Query: 366 SPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGS 545
           SPAYYKRGDYVPGLKVDGMD LAVKQACKFAKE+AL NGP+ILEMDTYRYHGHSMSDPGS
Sbjct: 246 SPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHALKNGPLILEMDTYRYHGHSMSDPGS 305

Query: 546 TYRTRDEISGVRQERDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMP 725
           TYRTRDEISGVRQERDPIER+RKL+L+H+++ EK+LKDIEK  RKEVDEAIAKAKESPMP
Sbjct: 306 TYRTRDEISGVRQERDPIERVRKLVLSHDIAAEKELKDIEKEVRKEVDEAIAKAKESPMP 365

Query: 726 DPSELFTNIYVKGYGVESYGADRKELRATLP 818
           DPS+LFTN+YVKGYGVE++GADRKE+RATLP
Sbjct: 366 DPSDLFTNVYVKGYGVETFGADRKEVRATLP 396


>gb|AAY86036.1| pyruvate dehydrogenase, partial [Citrus x paradisi]
          Length = 395

 Score =  496 bits (1277), Expect = e-138
 Identities = 236/266 (88%), Positives = 253/266 (95%)
 Frame = +3

Query: 21  GHGGSLVEAFSELMGRKDGCSKGKGGSMHFYKKESGFFGGHGIVGAQVPLGCGLAFAQKY 200
           G GG+L+E FSELMGRKDGCS GKGGSMHFYKK+S  +GGHGIVGAQ+PLGCGLAFAQKY
Sbjct: 130 GRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSRLYGGHGIVGAQIPLGCGLAFAQKY 189

Query: 201 KKDGCVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPAYY 380
            KD  VTFALYGDGAANQGQLFEALN+AALWDLPAILVCENNHYGMGTAEWRAAKSP+YY
Sbjct: 190 SKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYY 249

Query: 381 KRGDYVPGLKVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGSTYRTR 560
           KRGDYVPGLKVDGMDALAVKQACKFAKE+AL NGP+ILEMDTYRYHGHSMSDPGSTYRTR
Sbjct: 250 KRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGSTYRTR 309

Query: 561 DEISGVRQERDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMPDPSEL 740
           DEISGVRQERDPIERIRKLILAH+L+TEK+LKDIEK  RKEVDEAIAKAKESPMP+PSEL
Sbjct: 310 DEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDEAIAKAKESPMPEPSEL 369

Query: 741 FTNIYVKGYGVESYGADRKELRATLP 818
           FTN+YVKGYGVE +GADRKE+R+ LP
Sbjct: 370 FTNVYVKGYGVEVFGADRKEVRSVLP 395


>dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vulgaris]
          Length = 395

 Score =  494 bits (1273), Expect = e-138
 Identities = 235/271 (86%), Positives = 253/271 (93%)
 Frame = +3

Query: 6   HNLKSGHGGSLVEAFSELMGRKDGCSKGKGGSMHFYKKESGFFGGHGIVGAQVPLGCGLA 185
           H +    GGSL+ AF+ELMGR+DGCS+GKGGSMHFYKK+SGF+GGHGIVGAQVPLG GLA
Sbjct: 125 HCIYLARGGSLLSAFAELMGRQDGCSRGKGGSMHFYKKDSGFYGGHGIVGAQVPLGVGLA 184

Query: 186 FAQKYKKDGCVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 365
           FAQKY K+ CV+FALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK
Sbjct: 185 FAQKYNKEDCVSFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 244

Query: 366 SPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGS 545
           SP+YYKRGDYVPGLKVDGMD LAVKQACKFAKEY L NGPIILEMDTYRYHGHSMSDPGS
Sbjct: 245 SPSYYKRGDYVPGLKVDGMDVLAVKQACKFAKEYVLKNGPIILEMDTYRYHGHSMSDPGS 304

Query: 546 TYRTRDEISGVRQERDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMP 725
           TYRTRDEISG+RQERDPIER+RKL+LAH+++ EK+LKDIEK  RKEVDEAIAKAKESPMP
Sbjct: 305 TYRTRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKESPMP 364

Query: 726 DPSELFTNIYVKGYGVESYGADRKELRATLP 818
           D SELFTNIYVKGYGVES+GADRK LR TLP
Sbjct: 365 DTSELFTNIYVKGYGVESFGADRKVLRTTLP 395


>sp|P52903.1|ODPA_SOLTU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha,
           mitochondrial; Short=PDHE1-A; Flags: Precursor
           gi|473169|emb|CAA81558.1| E1 alpha subunit of pyruvate
           dehydrogenase precursor [Solanum tuberosum]
          Length = 391

 Score =  494 bits (1273), Expect = e-138
 Identities = 236/271 (87%), Positives = 254/271 (93%)
 Frame = +3

Query: 6   HNLKSGHGGSLVEAFSELMGRKDGCSKGKGGSMHFYKKESGFFGGHGIVGAQVPLGCGLA 185
           H +  G GG+LVEAF+ELMGR+DGCS+GKGGSMHFYKKESGF+GGHGIVGAQVPLG GLA
Sbjct: 121 HCIFLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLA 180

Query: 186 FAQKYKKDGCVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 365
           FAQKYKK+  VTFA+YGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK
Sbjct: 181 FAQKYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 240

Query: 366 SPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGS 545
           SPAYYKRGDYVPGL+VDGMD  AVKQAC FAK++AL NGPIILEMDTYRYHGHSMSDPGS
Sbjct: 241 SPAYYKRGDYVPGLRVDGMDVFAVKQACTFAKQHALKNGPIILEMDTYRYHGHSMSDPGS 300

Query: 546 TYRTRDEISGVRQERDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMP 725
           TYRTRDEISGVRQERDP+ERIR LILAH ++TE +LKDIEK  RK VDEAIAKAKESPMP
Sbjct: 301 TYRTRDEISGVRQERDPVERIRSLILAHNIATEAELKDIEKENRKVVDEAIAKAKESPMP 360

Query: 726 DPSELFTNIYVKGYGVESYGADRKELRATLP 818
           DPSELFTN+YVKG+GVE+YGADRKELRATLP
Sbjct: 361 DPSELFTNVYVKGFGVEAYGADRKELRATLP 391


>gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petunia x hybrida]
          Length = 390

 Score =  493 bits (1269), Expect = e-137
 Identities = 238/271 (87%), Positives = 254/271 (93%)
 Frame = +3

Query: 6   HNLKSGHGGSLVEAFSELMGRKDGCSKGKGGSMHFYKKESGFFGGHGIVGAQVPLGCGLA 185
           H +    GG+L E FSELMGRKDGCSKGKGGSMHFYKK+SGF+GGHGIVGAQVPLG GLA
Sbjct: 120 HCIFLSRGGTLFECFSELMGRKDGCSKGKGGSMHFYKKDSGFYGGHGIVGAQVPLGIGLA 179

Query: 186 FAQKYKKDGCVTFALYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 365
           FAQKY K+  VTFA+YGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK
Sbjct: 180 FAQKYSKEDHVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAK 239

Query: 366 SPAYYKRGDYVPGLKVDGMDALAVKQACKFAKEYALSNGPIILEMDTYRYHGHSMSDPGS 545
           SP+YYKRGDYVPGLKVDGMDALAVKQACKFAKE+AL NGPIILEMDTYRYHGHSMSDPGS
Sbjct: 240 SPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALKNGPIILEMDTYRYHGHSMSDPGS 299

Query: 546 TYRTRDEISGVRQERDPIERIRKLILAHELSTEKDLKDIEKNARKEVDEAIAKAKESPMP 725
           TYRTRDEISGVRQERDPIERIRKLILAH+++TEK+LKDIEK  RK VDEAIAKAKES MP
Sbjct: 300 TYRTRDEISGVRQERDPIERIRKLILAHDIATEKELKDIEKEKRKIVDEAIAKAKESAMP 359

Query: 726 DPSELFTNIYVKGYGVESYGADRKELRATLP 818
           DPSELFTN+YVKG+GVE+ GADRKE+RATLP
Sbjct: 360 DPSELFTNVYVKGFGVEACGADRKEVRATLP 390


Top