BLASTX nr result

ID: Coptis23_contig00004631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004631
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559860.1| PREDICTED: uncharacterized protein LOC100828...   263   4e-68
ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitocho...   263   4e-68
ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus comm...   261   1e-67
dbj|BAC81158.1| putative 30S ribosomal protein S9 [Oryza sativa ...   260   2e-67
dbj|BAC81159.1| putative 30S ribosomal protein S9 [Oryza sativa ...   260   2e-67

>ref|XP_003559860.1| PREDICTED: uncharacterized protein LOC100828544 [Brachypodium
           distachyon]
          Length = 412

 Score =  263 bits (672), Expect = 4e-68
 Identities = 124/144 (86%), Positives = 136/144 (94%)
 Frame = -2

Query: 829 RKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFLVNDKQFDVYFPIIDHRA 650
           +KQEEI K+RVR+VDEKGRAYGTG+RKCS+ARVWI+PG+GKF+VNDKQFDVYFPI+DHRA
Sbjct: 269 QKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDVYFPILDHRA 328

Query: 649 DLLRPFCETKTLGLWDVKCTVKGGGISGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 470
           DLLRPF  TKTLGLWDV CTVKGGG+SGQVGAVRLGISRALQNWEPGLR  LKA G+LTR
Sbjct: 329 DLLRPFNVTKTLGLWDVACTVKGGGVSGQVGAVRLGISRALQNWEPGLRPYLKAAGYLTR 388

Query: 469 DPRMVERKKPGKAKARKSFQWVKR 398
           D R+VERKKPGKAKARKSFQWVKR
Sbjct: 389 DSRVVERKKPGKAKARKSFQWVKR 412


>ref|XP_002274146.1| PREDICTED: 28S ribosomal protein S9, mitochondrial [Vitis vinifera]
           gi|147846771|emb|CAN80622.1| hypothetical protein
           VITISV_043432 [Vitis vinifera]
           gi|296084909|emb|CBI28318.3| unnamed protein product
           [Vitis vinifera]
          Length = 357

 Score =  263 bits (672), Expect = 4e-68
 Identities = 119/144 (82%), Positives = 136/144 (94%)
 Frame = -2

Query: 829 RKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFLVNDKQFDVYFPIIDHRA 650
           +KQEE+ K+RVR+VDEKGRAYGTGRRKCS+ARVW++PG+GKF++NDKQFDVYFP++DHRA
Sbjct: 214 QKQEEVAKARVRQVDEKGRAYGTGRRKCSIARVWVQPGDGKFMINDKQFDVYFPMLDHRA 273

Query: 649 DLLRPFCETKTLGLWDVKCTVKGGGISGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 470
            LLRPF ETKTLGLWDV CTVKGGG+SGQVGA+RLGISRALQNWEPGLR  L+  GFLTR
Sbjct: 274 ALLRPFSETKTLGLWDVNCTVKGGGLSGQVGAIRLGISRALQNWEPGLRPQLREAGFLTR 333

Query: 469 DPRMVERKKPGKAKARKSFQWVKR 398
           DPR+VERKKPGKAKARKS+QWVKR
Sbjct: 334 DPRVVERKKPGKAKARKSYQWVKR 357


>ref|XP_002513668.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223547576|gb|EEF49071.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 398

 Score =  261 bits (668), Expect = 1e-67
 Identities = 122/144 (84%), Positives = 135/144 (93%)
 Frame = -2

Query: 829 RKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFLVNDKQFDVYFPIIDHRA 650
           +KQEE+ KSRVR+VDEKGRAYGTGRRKCSVARVWIEPG+GKF+VNDKQFDVYFP++DHRA
Sbjct: 255 QKQEEVAKSRVRQVDEKGRAYGTGRRKCSVARVWIEPGDGKFIVNDKQFDVYFPMLDHRA 314

Query: 649 DLLRPFCETKTLGLWDVKCTVKGGGISGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 470
            LLRPF ETKTLGLWDVKCTVKGGG +GQVGA++LGISRA+QNWEP LR  L+  GFLTR
Sbjct: 315 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRAMQNWEPDLRPPLRNAGFLTR 374

Query: 469 DPRMVERKKPGKAKARKSFQWVKR 398
           DPR+VERKKPGKAKARKSFQWVKR
Sbjct: 375 DPRVVERKKPGKAKARKSFQWVKR 398


>dbj|BAC81158.1| putative 30S ribosomal protein S9 [Oryza sativa Japonica Group]
           gi|50510138|dbj|BAD31103.1| putative 30S ribosomal
           protein S9 [Oryza sativa Japonica Group]
          Length = 341

 Score =  260 bits (665), Expect = 2e-67
 Identities = 121/144 (84%), Positives = 135/144 (93%)
 Frame = -2

Query: 829 RKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFLVNDKQFDVYFPIIDHRA 650
           +KQEEI K+RVR+VDEKGRAYGTG+RKCS+ARVWI+PG+GKF+VNDKQFD YFPI+DHRA
Sbjct: 198 QKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDSYFPILDHRA 257

Query: 649 DLLRPFCETKTLGLWDVKCTVKGGGISGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 470
           DLLRPF  TKTLG WDV CTVKGGG+SGQVGA+RLGISRALQNWEPGLR +LKA G+LTR
Sbjct: 258 DLLRPFTVTKTLGRWDVTCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPNLKAAGYLTR 317

Query: 469 DPRMVERKKPGKAKARKSFQWVKR 398
           D R+VERKKPGKAKARKSFQWVKR
Sbjct: 318 DSRVVERKKPGKAKARKSFQWVKR 341


>dbj|BAC81159.1| putative 30S ribosomal protein S9 [Oryza sativa Japonica Group]
           gi|50510137|dbj|BAD31102.1| putative 30S ribosomal
           protein S9 [Oryza sativa Japonica Group]
           gi|215712346|dbj|BAG94473.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 415

 Score =  260 bits (665), Expect = 2e-67
 Identities = 121/144 (84%), Positives = 135/144 (93%)
 Frame = -2

Query: 829 RKQEEIDKSRVRRVDEKGRAYGTGRRKCSVARVWIEPGEGKFLVNDKQFDVYFPIIDHRA 650
           +KQEEI K+RVR+VDEKGRAYGTG+RKCS+ARVWI+PG+GKF+VNDKQFD YFPI+DHRA
Sbjct: 272 QKQEEIAKARVRQVDEKGRAYGTGKRKCSIARVWIQPGDGKFIVNDKQFDSYFPILDHRA 331

Query: 649 DLLRPFCETKTLGLWDVKCTVKGGGISGQVGAVRLGISRALQNWEPGLRSDLKAVGFLTR 470
           DLLRPF  TKTLG WDV CTVKGGG+SGQVGA+RLGISRALQNWEPGLR +LKA G+LTR
Sbjct: 332 DLLRPFTVTKTLGRWDVTCTVKGGGVSGQVGAIRLGISRALQNWEPGLRPNLKAAGYLTR 391

Query: 469 DPRMVERKKPGKAKARKSFQWVKR 398
           D R+VERKKPGKAKARKSFQWVKR
Sbjct: 392 DSRVVERKKPGKAKARKSFQWVKR 415


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