BLASTX nr result

ID: Coptis23_contig00004629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004629
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm...   301   5e-80
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2...   301   6e-80
emb|CBI37242.3| unnamed protein product [Vitis vinifera]              300   1e-79
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...   300   1e-79
ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820...   299   2e-79

>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
           gi|223539723|gb|EEF41305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1384

 Score =  301 bits (771), Expect = 5e-80
 Identities = 153/186 (82%), Positives = 162/186 (87%)
 Frame = -3

Query: 558 SSPKNKSLTREISLTGGESDVTEKPIDAVTIYSEKELIREFEKIASTLVPEKDWSIRIAA 379
           SSPK KS TRE+SL GGESDVTEKPI+ V +YSEKELIREFEK+ASTLVPEKDWSIRIAA
Sbjct: 185 SSPKAKSTTREVSLFGGESDVTEKPIEPVKVYSEKELIREFEKVASTLVPEKDWSIRIAA 244

Query: 378 MQRVEGLVFGGATDYPSFLSLLKQLVPPLSIQLSDRRSSVVKQACHXXXXXXXXXLGDFE 199
           MQR+EGLV GGA DYP F  LLKQLV PLS QLSDRRSS+VKQACH         LGDFE
Sbjct: 245 MQRIEGLVLGGAADYPCFRGLLKQLVSPLSTQLSDRRSSIVKQACHLLCFLSKELLGDFE 304

Query: 198 ACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 19
            CAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKV RVL RIADCAKNDR+A+LRAR
Sbjct: 305 GCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVGRVLLRIADCAKNDRSAILRAR 364

Query: 18  CCDYAL 1
           CC+YAL
Sbjct: 365 CCEYAL 370


>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
           predicted protein [Populus trichocarpa]
          Length = 1426

 Score =  301 bits (770), Expect = 6e-80
 Identities = 155/186 (83%), Positives = 162/186 (87%)
 Frame = -3

Query: 558 SSPKNKSLTREISLTGGESDVTEKPIDAVTIYSEKELIREFEKIASTLVPEKDWSIRIAA 379
           SSPK KS TREISL G ESDVTEKPI+ + +YSEKELIREFEKIA+TLVPEKDW+IRIAA
Sbjct: 247 SSPKAKSSTREISLFGAESDVTEKPIEPIKVYSEKELIREFEKIAATLVPEKDWTIRIAA 306

Query: 378 MQRVEGLVFGGATDYPSFLSLLKQLVPPLSIQLSDRRSSVVKQACHXXXXXXXXXLGDFE 199
           MQRVEGLV GGATDYP F  LLKQ V PL+ QLSDRRSSVVKQACH         LGDFE
Sbjct: 307 MQRVEGLVLGGATDYPCFRGLLKQFVGPLNTQLSDRRSSVVKQACHLLCFLSKDLLGDFE 366

Query: 198 ACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 19
           ACAEMFIP LFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDR AVLRAR
Sbjct: 367 ACAEMFIPALFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRAAVLRAR 426

Query: 18  CCDYAL 1
           CC+YAL
Sbjct: 427 CCEYAL 432


>emb|CBI37242.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score =  300 bits (767), Expect = 1e-79
 Identities = 151/186 (81%), Positives = 163/186 (87%)
 Frame = -3

Query: 558 SSPKNKSLTREISLTGGESDVTEKPIDAVTIYSEKELIREFEKIASTLVPEKDWSIRIAA 379
           SSPK K+ TRE+SL G E+D+TEKPID + +YSEKEL+RE EKIASTLVPEKDWSIRIAA
Sbjct: 62  SSPKAKNSTREMSLFGAENDITEKPIDPIKVYSEKELVREIEKIASTLVPEKDWSIRIAA 121

Query: 378 MQRVEGLVFGGATDYPSFLSLLKQLVPPLSIQLSDRRSSVVKQACHXXXXXXXXXLGDFE 199
           MQRVEGLV GGA DYP F  LLKQLV PLSIQLSDRRSS+VKQ CH         LGDFE
Sbjct: 122 MQRVEGLVSGGAADYPGFRGLLKQLVGPLSIQLSDRRSSIVKQTCHLLIFLSKELLGDFE 181

Query: 198 ACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 19
           +CAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLP+IADCAKNDRNAVLRAR
Sbjct: 182 SCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPKIADCAKNDRNAVLRAR 241

Query: 18  CCDYAL 1
           CC+Y+L
Sbjct: 242 CCEYSL 247


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score =  300 bits (767), Expect = 1e-79
 Identities = 151/186 (81%), Positives = 163/186 (87%)
 Frame = -3

Query: 558 SSPKNKSLTREISLTGGESDVTEKPIDAVTIYSEKELIREFEKIASTLVPEKDWSIRIAA 379
           SSPK K+ TRE+SL G E+D+TEKPID + +YSEKEL+RE EKIASTLVPEKDWSIRIAA
Sbjct: 247 SSPKAKNSTREMSLFGAENDITEKPIDPIKVYSEKELVREIEKIASTLVPEKDWSIRIAA 306

Query: 378 MQRVEGLVFGGATDYPSFLSLLKQLVPPLSIQLSDRRSSVVKQACHXXXXXXXXXLGDFE 199
           MQRVEGLV GGA DYP F  LLKQLV PLSIQLSDRRSS+VKQ CH         LGDFE
Sbjct: 307 MQRVEGLVSGGAADYPGFRGLLKQLVGPLSIQLSDRRSSIVKQTCHLLIFLSKELLGDFE 366

Query: 198 ACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 19
           +CAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLP+IADCAKNDRNAVLRAR
Sbjct: 367 SCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPKIADCAKNDRNAVLRAR 426

Query: 18  CCDYAL 1
           CC+Y+L
Sbjct: 427 CCEYSL 432


>ref|XP_003554315.1| PREDICTED: uncharacterized protein LOC100820523 [Glycine max]
          Length = 1444

 Score =  299 bits (766), Expect = 2e-79
 Identities = 153/185 (82%), Positives = 161/185 (87%)
 Frame = -3

Query: 558 SSPKNKSLTREISLTGGESDVTEKPIDAVTIYSEKELIREFEKIASTLVPEKDWSIRIAA 379
           SSPK KS +RE SL GGE D+TEKPID V +YS+KELIREFEKIASTLVPEKDWSIRIAA
Sbjct: 247 SSPKAKSSSRENSLFGGEGDITEKPIDPVKVYSDKELIREFEKIASTLVPEKDWSIRIAA 306

Query: 378 MQRVEGLVFGGATDYPSFLSLLKQLVPPLSIQLSDRRSSVVKQACHXXXXXXXXXLGDFE 199
           MQRVEGLV GGA DYP F  LLKQLV PL+ QLSDRRS++VKQACH         LGDFE
Sbjct: 307 MQRVEGLVLGGAVDYPCFCGLLKQLVGPLTTQLSDRRSTIVKQACHLLCFLSKELLGDFE 366

Query: 198 ACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 19
           ACAEM IPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR
Sbjct: 367 ACAEMLIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRAR 426

Query: 18  CCDYA 4
           CC+YA
Sbjct: 427 CCEYA 431


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