BLASTX nr result

ID: Coptis23_contig00004621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004621
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532758.1| conserved hypothetical protein [Ricinus comm...   111   8e-23
gb|AEJ88279.1| putative CHCH domain protein [Wolffia australiana]     107   9e-22
ref|XP_002269289.1| PREDICTED: uncharacterized protein C6C3.02c ...   107   1e-21
gb|ADB08696.1| hypothetical protein [Wolffia arrhiza]                 105   5e-21
ref|NP_001237382.1| uncharacterized protein LOC100500139 [Glycin...   104   8e-21

>ref|XP_002532758.1| conserved hypothetical protein [Ricinus communis]
           gi|223527487|gb|EEF29615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 144

 Score =  111 bits (277), Expect = 8e-23
 Identities = 56/88 (63%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -2

Query: 427 AQGMAFGGGSAVAHRAVDSIMGPRTIQXXXXXXXXXXXXXXXXXG-SDACSLHSRAFNDC 251
           AQGMAFG GSAVAHRAVD++MGPRTIQ                 G +DACS+HS+AF DC
Sbjct: 56  AQGMAFGTGSAVAHRAVDAVMGPRTIQHETVVSEAAAAAPAPAAGGADACSIHSKAFQDC 115

Query: 250 ISANGSDISKCQFYLDMLSECRKNSTMS 167
           +++ GSDISKCQFY+DMLSECRKNS +S
Sbjct: 116 VNSFGSDISKCQFYMDMLSECRKNSMLS 143


>gb|AEJ88279.1| putative CHCH domain protein [Wolffia australiana]
          Length = 140

 Score =  107 bits (268), Expect = 9e-22
 Identities = 51/88 (57%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -2

Query: 427 AQGMAFGGGSAVAHRAVDSIMGPRTIQXXXXXXXXXXXXXXXXXGS-DACSLHSRAFNDC 251
           AQGMAFG GSAVAHRAVD++MGPRT+Q                  + D+C++HS+AF DC
Sbjct: 52  AQGMAFGTGSAVAHRAVDAVMGPRTVQHEYVDSSAAAPAASAPAPTADSCNIHSKAFQDC 111

Query: 250 ISANGSDISKCQFYLDMLSECRKNSTMS 167
           IS+NG+DISKCQFYLDML+ECR+ S ++
Sbjct: 112 ISSNGADISKCQFYLDMLNECRRGSVLN 139


>ref|XP_002269289.1| PREDICTED: uncharacterized protein C6C3.02c [Vitis vinifera]
           gi|296088792|emb|CBI38242.3| unnamed protein product
           [Vitis vinifera]
          Length = 145

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/87 (60%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
 Frame = -2

Query: 427 AQGMAFGGGSAVAHRAVDSIMGPRTIQXXXXXXXXXXXXXXXXXG---SDACSLHSRAFN 257
           AQGMAFG GSAVAHRAVD++MGPRTIQ                     SDAC+ HS+AF 
Sbjct: 53  AQGMAFGTGSAVAHRAVDAVMGPRTIQHETVASEAAASSAPTMNNVGGSDACNAHSKAFQ 112

Query: 256 DCISANGSDISKCQFYLDMLSECRKNS 176
           DC++++GSDISKCQFY+DMLSECR+NS
Sbjct: 113 DCLNSSGSDISKCQFYMDMLSECRRNS 139


>gb|ADB08696.1| hypothetical protein [Wolffia arrhiza]
          Length = 140

 Score =  105 bits (262), Expect = 5e-21
 Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -2

Query: 427 AQGMAFGGGSAVAHRAVDSIMGPRTIQXXXXXXXXXXXXXXXXXGS-DACSLHSRAFNDC 251
           AQGMAFG GSAVAHRAVD++MGPRT+Q                  + D+C++H++AF DC
Sbjct: 52  AQGMAFGTGSAVAHRAVDAVMGPRTVQHEYVEASAASPAASAPAPTMDSCNIHTKAFQDC 111

Query: 250 ISANGSDISKCQFYLDMLSECRKNSTMS 167
           I++NG+DISKCQFYLDML+ECR+ S ++
Sbjct: 112 INSNGADISKCQFYLDMLNECRRGSVLN 139


>ref|NP_001237382.1| uncharacterized protein LOC100500139 [Glycine max]
           gi|255629432|gb|ACU15062.1| unknown [Glycine max]
          Length = 141

 Score =  104 bits (260), Expect = 8e-21
 Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
 Frame = -2

Query: 427 AQGMAFGGGSAVAHRAVDSIMGPRTIQXXXXXXXXXXXXXXXXXGS---DACSLHSRAFN 257
           AQGMAFG GSAVAHRAVD++MGPRTIQ                  +   DACS+H++AF 
Sbjct: 49  AQGMAFGTGSAVAHRAVDAVMGPRTIQHETVVTEAAAAAPAPTANTFGGDACSIHTKAFQ 108

Query: 256 DCISANGSDISKCQFYLDMLSECRKNS 176
           DC++  G+DISKCQFY+DML+ECRKNS
Sbjct: 109 DCLNGYGNDISKCQFYMDMLAECRKNS 135


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