BLASTX nr result
ID: Coptis23_contig00004603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004603
(854 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298240.1| ABC transporter family, pleiotropic drug res... 261 2e-90
emb|CBI36070.3| unnamed protein product [Vitis vinifera] 259 2e-87
ref|XP_002278313.2| PREDICTED: ABC transporter G family member 2... 259 2e-87
emb|CAN76184.1| hypothetical protein VITISV_033076 [Vitis vinifera] 259 2e-87
ref|XP_003632787.1| PREDICTED: ABC transporter G family member 2... 257 3e-86
>ref|XP_002298240.1| ABC transporter family, pleiotropic drug resistance protein [Populus
trichocarpa] gi|222845498|gb|EEE83045.1| ABC transporter
family, pleiotropic drug resistance protein [Populus
trichocarpa]
Length = 1436
Score = 261 bits (668), Expect(3) = 2e-90
Identities = 122/166 (73%), Positives = 138/166 (83%)
Frame = +3
Query: 36 LVLMKRGGQLIYGGPFGRNSHKIVEYFEGVPGILKNKDKYNPATWMLEASSIAAEVRLGM 215
L+LMKRGGQ IY GP GRNSHKI+EYFE +PG+ K K+KYNPATWMLE SS+AAEVRLGM
Sbjct: 1055 LLLMKRGGQAIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSVAAEVRLGM 1114
Query: 216 DFTEYCRSSPLYQRNKTLVKELSTPVPTAKDLYFATQYSQSTWGQFKSCL*KQWWIYWRT 395
DF E RSS L+QRNK LVKELSTP P A +LYFATQYS+S WGQFKSCL KQWW YWR+
Sbjct: 1115 DFAEQYRSSSLHQRNKALVKELSTPPPGATNLYFATQYSESAWGQFKSCLWKQWWTYWRS 1174
Query: 396 TEYNLVRFFFTLAIALLFGSIFWSAGTKRELSTDLTIIFGAMYVSV 533
+YNLVR+FFTL AL+ GSIFW GTKR+ S+DL +I GAMY SV
Sbjct: 1175 PDYNLVRYFFTLVCALMVGSIFWKVGTKRDSSSDLNMIIGAMYASV 1220
Score = 67.0 bits (162), Expect(3) = 2e-90
Identities = 34/42 (80%), Positives = 35/42 (83%)
Frame = +2
Query: 533 VLFVGINN*STVQPVVAIERTVFY*ESVAGMYLALPYVIDQV 658
VLFVGINN STVQPVVA+ERTVFY E AGMY ALPY I QV
Sbjct: 1220 VLFVGINNCSTVQPVVAVERTVFYREKAAGMYSALPYAIAQV 1261
Score = 52.8 bits (125), Expect(3) = 2e-90
Identities = 22/32 (68%), Positives = 27/32 (84%), Gaps = 2/32 (6%)
Frame = +1
Query: 763 YAVMQAICEIPFVFIQTVYYT--VYAMVSFQW 852
YA+ Q +CEIP+VF+QT YYT VYAMVSF+W
Sbjct: 1256 YAIAQVVCEIPYVFVQTTYYTLIVYAMVSFEW 1287
>emb|CBI36070.3| unnamed protein product [Vitis vinifera]
Length = 1493
Score = 259 bits (663), Expect(3) = 2e-87
Identities = 122/166 (73%), Positives = 138/166 (83%)
Frame = +3
Query: 36 LVLMKRGGQLIYGGPFGRNSHKIVEYFEGVPGILKNKDKYNPATWMLEASSIAAEVRLGM 215
L+LMKRGGQ+IY GP GRNSHKI+EYFE +P + K K+KYNPATWMLE SSIAAE+RL M
Sbjct: 1113 LLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPQVPKIKEKYNPATWMLEVSSIAAEIRLEM 1172
Query: 216 DFTEYCRSSPLYQRNKTLVKELSTPVPTAKDLYFATQYSQSTWGQFKSCL*KQWWIYWRT 395
DF E+ +SS LYQRNK LVKELSTP P AKDLYF TQYSQS WGQFKSC+ KQWW YWR+
Sbjct: 1173 DFAEHYKSSSLYQRNKALVKELSTPPPGAKDLYFLTQYSQSIWGQFKSCIWKQWWTYWRS 1232
Query: 396 TEYNLVRFFFTLAIALLFGSIFWSAGTKRELSTDLTIIFGAMYVSV 533
+YNLVRF FTLA ALL G+IFW GTKRE + DLT+I GAMY +V
Sbjct: 1233 PDYNLVRFSFTLAAALLVGTIFWKVGTKRENTNDLTMIIGAMYAAV 1278
Score = 64.3 bits (155), Expect(3) = 2e-87
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 533 VLFVGINN*STVQPVVAIERTVFY*ESVAGMYLALPYVIDQV 658
VLFVGINN STVQP+VA+ERTVFY E AGMY A+PY + QV
Sbjct: 1278 VLFVGINNCSTVQPIVAVERTVFYRERAAGMYSAMPYAMAQV 1319
Score = 47.0 bits (110), Expect(3) = 2e-87
Identities = 20/32 (62%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Frame = +1
Query: 763 YAVMQAICEIPFVFIQTVYYT--VYAMVSFQW 852
YA+ Q + EIP+VF+QT YY+ VYA+VSFQW
Sbjct: 1314 YAMAQVVAEIPYVFVQTAYYSLIVYALVSFQW 1345
>ref|XP_002278313.2| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
Length = 1438
Score = 259 bits (663), Expect(3) = 2e-87
Identities = 122/166 (73%), Positives = 138/166 (83%)
Frame = +3
Query: 36 LVLMKRGGQLIYGGPFGRNSHKIVEYFEGVPGILKNKDKYNPATWMLEASSIAAEVRLGM 215
L+LMKRGGQ+IY GP GRNSHKI+EYFE +P + K K+KYNPATWMLE SSIAAE+RL M
Sbjct: 1058 LLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPQVPKIKEKYNPATWMLEVSSIAAEIRLEM 1117
Query: 216 DFTEYCRSSPLYQRNKTLVKELSTPVPTAKDLYFATQYSQSTWGQFKSCL*KQWWIYWRT 395
DF E+ +SS LYQRNK LVKELSTP P AKDLYF TQYSQS WGQFKSC+ KQWW YWR+
Sbjct: 1118 DFAEHYKSSSLYQRNKALVKELSTPPPGAKDLYFLTQYSQSIWGQFKSCIWKQWWTYWRS 1177
Query: 396 TEYNLVRFFFTLAIALLFGSIFWSAGTKRELSTDLTIIFGAMYVSV 533
+YNLVRF FTLA ALL G+IFW GTKRE + DLT+I GAMY +V
Sbjct: 1178 PDYNLVRFSFTLAAALLVGTIFWKVGTKRENTNDLTMIIGAMYAAV 1223
Score = 64.3 bits (155), Expect(3) = 2e-87
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 533 VLFVGINN*STVQPVVAIERTVFY*ESVAGMYLALPYVIDQV 658
VLFVGINN STVQP+VA+ERTVFY E AGMY A+PY + QV
Sbjct: 1223 VLFVGINNCSTVQPIVAVERTVFYRERAAGMYSAMPYAMAQV 1264
Score = 47.0 bits (110), Expect(3) = 2e-87
Identities = 20/32 (62%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Frame = +1
Query: 763 YAVMQAICEIPFVFIQTVYYT--VYAMVSFQW 852
YA+ Q + EIP+VF+QT YY+ VYA+VSFQW
Sbjct: 1259 YAMAQVVAEIPYVFVQTAYYSLIVYALVSFQW 1290
>emb|CAN76184.1| hypothetical protein VITISV_033076 [Vitis vinifera]
Length = 632
Score = 259 bits (663), Expect(3) = 2e-87
Identities = 122/166 (73%), Positives = 138/166 (83%)
Frame = +3
Query: 36 LVLMKRGGQLIYGGPFGRNSHKIVEYFEGVPGILKNKDKYNPATWMLEASSIAAEVRLGM 215
L+LMKRGGQ+IY GP GRNSHKI+EYFE +P + K K+KYNPATWMLE SSIAAE+RL M
Sbjct: 252 LLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPQVPKIKEKYNPATWMLEVSSIAAEIRLEM 311
Query: 216 DFTEYCRSSPLYQRNKTLVKELSTPVPTAKDLYFATQYSQSTWGQFKSCL*KQWWIYWRT 395
DF E+ +SS LYQRNK LVKELSTP P AKDLYF TQYSQS WGQFKSC+ KQWW YWR+
Sbjct: 312 DFAEHYKSSSLYQRNKALVKELSTPPPGAKDLYFLTQYSQSIWGQFKSCIWKQWWTYWRS 371
Query: 396 TEYNLVRFFFTLAIALLFGSIFWSAGTKRELSTDLTIIFGAMYVSV 533
+YNLVRF FTLA ALL G+IFW GTKRE + DLT+I GAMY +V
Sbjct: 372 PDYNLVRFSFTLAAALLVGTIFWKVGTKRENTNDLTMIIGAMYAAV 417
Score = 64.3 bits (155), Expect(3) = 2e-87
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 533 VLFVGINN*STVQPVVAIERTVFY*ESVAGMYLALPYVIDQV 658
VLFVGINN STVQP+VA+ERTVFY E AGMY A+PY + QV
Sbjct: 417 VLFVGINNCSTVQPIVAVERTVFYRERAAGMYSAMPYAMAQV 458
Score = 47.0 bits (110), Expect(3) = 2e-87
Identities = 20/32 (62%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Frame = +1
Query: 763 YAVMQAICEIPFVFIQTVYYT--VYAMVSFQW 852
YA+ Q + EIP+VF+QT YY+ VYA+VSFQW
Sbjct: 453 YAMAQVVAEIPYVFVQTAYYSLIVYALVSFQW 484
>ref|XP_003632787.1| PREDICTED: ABC transporter G family member 29-like [Vitis vinifera]
Length = 1434
Score = 257 bits (656), Expect(3) = 3e-86
Identities = 123/168 (73%), Positives = 138/168 (82%)
Frame = +3
Query: 30 N*LVLMKRGGQLIYGGPFGRNSHKIVEYFEGVPGILKNKDKYNPATWMLEASSIAAEVRL 209
N L+LMKRGGQ+IY GP GRNSHKI+EYFEG P + K K+KYNPATWMLE SSIAAE+RL
Sbjct: 1052 NELLLMKRGGQVIYSGPLGRNSHKIIEYFEGDPQVPKIKEKYNPATWMLEVSSIAAEIRL 1111
Query: 210 GMDFTEYCRSSPLYQRNKTLVKELSTPVPTAKDLYFATQYSQSTWGQFKSCL*KQWWIYW 389
MDF E+ +SS L QRNK LVKELSTP P AKDLYF TQYSQS WGQFKSC+ KQWW YW
Sbjct: 1112 EMDFAEHYKSSSLNQRNKALVKELSTPPPGAKDLYFLTQYSQSIWGQFKSCIWKQWWTYW 1171
Query: 390 RTTEYNLVRFFFTLAIALLFGSIFWSAGTKRELSTDLTIIFGAMYVSV 533
R+ +YNLVRF FTLA ALL G+IFW GTKRE + DLT+I GAMY +V
Sbjct: 1172 RSPDYNLVRFSFTLAAALLVGTIFWKVGTKRENTNDLTMIIGAMYAAV 1219
Score = 64.3 bits (155), Expect(3) = 3e-86
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 533 VLFVGINN*STVQPVVAIERTVFY*ESVAGMYLALPYVIDQV 658
VLFVGINN STVQP+VA+ERTVFY E AGMY A+PY + QV
Sbjct: 1219 VLFVGINNCSTVQPIVAVERTVFYRERAAGMYSAMPYAMAQV 1260
Score = 45.8 bits (107), Expect(3) = 3e-86
Identities = 20/32 (62%), Positives = 25/32 (78%), Gaps = 2/32 (6%)
Frame = +1
Query: 763 YAVMQAICEIPFVFIQTVYYT--VYAMVSFQW 852
YA+ Q + EIP+VF QT YY+ VYA+VSFQW
Sbjct: 1255 YAMAQVVAEIPYVFFQTAYYSLIVYALVSFQW 1286