BLASTX nr result

ID: Coptis23_contig00004602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004602
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-l...   205   1e-50
ref|XP_002530606.1| nuclear protein skip, putative [Ricinus comm...   201   2e-49
ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [...   200   4e-49
ref|XP_002324443.1| predicted protein [Populus trichocarpa] gi|2...   198   1e-48
ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-l...   197   4e-48

>ref|XP_002283858.1| PREDICTED: SNW domain-containing protein 1-like isoform 1 [Vitis
           vinifera] gi|359484551|ref|XP_003633120.1| PREDICTED:
           SNW domain-containing protein 1-like isoform 2 [Vitis
           vinifera]
          Length = 602

 Score =  205 bits (522), Expect = 1e-50
 Identities = 101/146 (69%), Positives = 116/146 (79%)
 Frame = +2

Query: 2   REREPPKESRDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEK 181
           +ER+ PKE+R+                          AKDAAMGKKSKITRDRDRDISEK
Sbjct: 375 KERDFPKETREEREERLQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEK 434

Query: 182 VALGMANTGAGRGGEVIYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQSTLSSLYKPT 361
           ++LGMA+TGAGRGGEV+YDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQ+TLSSLY+P 
Sbjct: 435 ISLGMASTGAGRGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQNTLSSLYRPK 494

Query: 362 RDTDTDTYGGADEQLEKVLKTDRFKP 439
           +D D+D YGGADEQLEK++KT+RFKP
Sbjct: 495 KDADSDIYGGADEQLEKIMKTERFKP 520



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 609 GTMKASAGSSMRDGHDGGSGRTRIGFERGR 698
           GTM+ASAGSSMRDGHDGGSGRTRIGFERGR
Sbjct: 573 GTMRASAGSSMRDGHDGGSGRTRIGFERGR 602


>ref|XP_002530606.1| nuclear protein skip, putative [Ricinus communis]
           gi|223529854|gb|EEF31786.1| nuclear protein skip,
           putative [Ricinus communis]
          Length = 238

 Score =  201 bits (512), Expect = 2e-49
 Identities = 100/146 (68%), Positives = 113/146 (77%)
 Frame = +2

Query: 2   REREPPKESRDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEK 181
           R ++ PKE+R+                          AKDAAMGKKSKITRDRDRDISEK
Sbjct: 11  RGKDAPKETREEREERLQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEK 70

Query: 182 VALGMANTGAGRGGEVIYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQSTLSSLYKPT 361
           VALGMA+TGA RGGEV+YDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQ TLS+LY+P 
Sbjct: 71  VALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQPTLSTLYRPK 130

Query: 362 RDTDTDTYGGADEQLEKVLKTDRFKP 439
           +D D+D YGGADEQL+K++KTDRFKP
Sbjct: 131 KDVDSDMYGGADEQLDKIMKTDRFKP 156



 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 609 GTMKASAGSSMRDGHDGGSGRTRIGFERGR 698
           GTM+AS GSS RDG+DGGSGRTRIGFERGR
Sbjct: 209 GTMRASGGSSTRDGYDGGSGRTRIGFERGR 238


>ref|XP_004149509.1| PREDICTED: puff-specific protein Bx42-like [Cucumis sativus]
           gi|449523876|ref|XP_004168949.1| PREDICTED:
           puff-specific protein Bx42-like [Cucumis sativus]
          Length = 603

 Score =  200 bits (508), Expect = 4e-49
 Identities = 99/146 (67%), Positives = 113/146 (77%)
 Frame = +2

Query: 2   REREPPKESRDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEK 181
           +E++ PKESR+                          AKDAAMGKKSKITRDRDRDISEK
Sbjct: 376 KEKDLPKESREEREERLQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEK 435

Query: 182 VALGMANTGAGRGGEVIYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQSTLSSLYKPT 361
           VALGMA+TGAGR GEV+YDQRLFNQ+KGMDSGFA DDQYN+YDKGLFTAQ TLS+LY+P 
Sbjct: 436 VALGMASTGAGRQGEVMYDQRLFNQDKGMDSGFANDDQYNIYDKGLFTAQPTLSTLYRPK 495

Query: 362 RDTDTDTYGGADEQLEKVLKTDRFKP 439
           +DTD+D YGGADEQL+K+ KTDRFKP
Sbjct: 496 KDTDSDMYGGADEQLDKITKTDRFKP 521


>ref|XP_002324443.1| predicted protein [Populus trichocarpa] gi|222865877|gb|EEF03008.1|
           predicted protein [Populus trichocarpa]
          Length = 611

 Score =  198 bits (504), Expect = 1e-48
 Identities = 98/146 (67%), Positives = 112/146 (76%)
 Frame = +2

Query: 2   REREPPKESRDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEK 181
           RER+ PKE+R+                          AKDAAMGKKSKITRDRDRDISEK
Sbjct: 384 RERDAPKETREEREERLRREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEK 443

Query: 182 VALGMANTGAGRGGEVIYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQSTLSSLYKPT 361
           VALGMA+TGAG+GGEV YDQRLFNQEKGMDSGFA DDQY+VYDKGLFTAQ TLS+LY+P 
Sbjct: 444 VALGMASTGAGKGGEVAYDQRLFNQEKGMDSGFAADDQYSVYDKGLFTAQPTLSTLYRPK 503

Query: 362 RDTDTDTYGGADEQLEKVLKTDRFKP 439
           +D D + YGGADEQL+K++KT+RFKP
Sbjct: 504 KDVDAEMYGGADEQLDKIMKTERFKP 529



 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +3

Query: 609 GTMKASAGSSMRDGHDGGSGRTRIGFERGR 698
           GTM+ASAGSSMRDGHDGGSGRTRIGFERGR
Sbjct: 582 GTMRASAGSSMRDGHDGGSGRTRIGFERGR 611


>ref|XP_004139354.1| PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus]
           gi|449487951|ref|XP_004157882.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 1 [Cucumis
           sativus] gi|449487953|ref|XP_004157883.1| PREDICTED: SNW
           domain-containing protein 1-like isoform 2 [Cucumis
           sativus]
          Length = 605

 Score =  197 bits (500), Expect = 4e-48
 Identities = 97/146 (66%), Positives = 112/146 (76%)
 Frame = +2

Query: 2   REREPPKESRDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDAAMGKKSKITRDRDRDISEK 181
           +E++ PKESR+                          AKDAAMGKKSKITRDRDRDISEK
Sbjct: 378 KEKDLPKESREEREERLQREKIREERRRERERERRLEAKDAAMGKKSKITRDRDRDISEK 437

Query: 182 VALGMANTGAGRGGEVIYDQRLFNQEKGMDSGFATDDQYNVYDKGLFTAQSTLSSLYKPT 361
           VALGMA+TGAGR GEV+YDQRLFNQ+KGMDSGFA DDQYN+YD+GLFTAQ TLS+LY+P 
Sbjct: 438 VALGMASTGAGREGEVMYDQRLFNQDKGMDSGFANDDQYNIYDRGLFTAQPTLSTLYRPK 497

Query: 362 RDTDTDTYGGADEQLEKVLKTDRFKP 439
           +D D+D YGGADEQL+K+ KTDRFKP
Sbjct: 498 KDADSDMYGGADEQLDKITKTDRFKP 523


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