BLASTX nr result

ID: Coptis23_contig00004590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004590
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523398.1| glucosidase II beta subunit, putative [Ricin...   376   e-102
ref|XP_002283762.2| PREDICTED: glucosidase 2 subunit beta-like [...   372   e-100
ref|XP_003529450.1| PREDICTED: glucosidase 2 subunit beta-like [...   367   6e-99
ref|XP_002299093.1| predicted protein [Populus trichocarpa] gi|2...   362   2e-97
ref|XP_003607830.1| Glucosidase ii beta subunit [Medicago trunca...   356   8e-96

>ref|XP_002523398.1| glucosidase II beta subunit, putative [Ricinus communis]
            gi|223537348|gb|EEF38977.1| glucosidase II beta subunit,
            putative [Ricinus communis]
          Length = 683

 Score =  376 bits (965), Expect = e-102
 Identities = 193/321 (60%), Positives = 232/321 (72%), Gaps = 4/321 (1%)
 Frame = -3

Query: 1337 SESTAELSKEELGRLVASRWTGENVEQKTKNVNDAKLXXXXXXXXXXXXXXE----DNAG 1170
            SE+T  LSKE+LGRLVASRWTG + E++T+ V+ AK               +    +  G
Sbjct: 378  SENTEGLSKEDLGRLVASRWTGSS-EKQTEGVDVAKNSDHEDHEEHEEMPPDMHDEEYDG 436

Query: 1169 YSSETDGEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGASYKPDSED 990
            Y+S TD +                                          G+SYK D ED
Sbjct: 437  YASGTDDDTGKYDDIDTEDDTDESYEDDSHDDV-----------------GSSYKSDHED 479

Query: 989  PIDFSDTTTASSPSWLDKIQDTVRNIFQSVNIFQTPIDKSEASRIKKEYEDSSSKLSKIQ 810
             +DFSDTT +SSPSWL+KIQ TVRNI Q+VN FQTP+DKSEA+ ++KEYE+SS+KL+KIQ
Sbjct: 480  ELDFSDTTFSSSPSWLEKIQQTVRNILQAVNFFQTPVDKSEAANVRKEYEESSAKLTKIQ 539

Query: 809  SRISSLKEKLKHDVGMEKEFYSFYDRCFENKQNKYVYKVCPFKQASQVEGHSKTQLGHWE 630
            SRISSL +KLK D G+EKEF+SFYD+CFE+KQNKYVYKVCPFKQASQ EGHS T+LG W+
Sbjct: 540  SRISSLTQKLKQDFGIEKEFFSFYDQCFESKQNKYVYKVCPFKQASQTEGHSTTRLGRWD 599

Query: 629  KFEDSYRFMVFSNGDKCWNGPDRSLKVKLRCGLTNDLTDVDEPSRCEYVALLSTPALCLD 450
            KFEDS+R M+FSNGD+CWNGPDRSLKVKLRCGL N++TDVDEPSRCEYVALLSTPA CL+
Sbjct: 600  KFEDSHRVMIFSNGDRCWNGPDRSLKVKLRCGLKNEVTDVDEPSRCEYVALLSTPAFCLE 659

Query: 449  ERLKELQHKLDLMNLEQPQSH 387
            E+LKEL++KLDLMN EQPQSH
Sbjct: 660  EKLKELENKLDLMNKEQPQSH 680


>ref|XP_002283762.2| PREDICTED: glucosidase 2 subunit beta-like [Vitis vinifera]
            gi|297746510|emb|CBI16566.3| unnamed protein product
            [Vitis vinifera]
          Length = 638

 Score =  372 bits (956), Expect = e-100
 Identities = 190/316 (60%), Positives = 225/316 (71%), Gaps = 1/316 (0%)
 Frame = -3

Query: 1337 SESTAELSKEELGRLVASRWTGENVEQKTKNVNDAKLXXXXXXXXXXXXXXEDNA-GYSS 1161
            +E+T  LS+EELGRLVASRWTGEN  Q T+ V+  K                +   GY+S
Sbjct: 335  AENTEGLSREELGRLVASRWTGENTGQHTEEVDAVKHDHHESHEETPEDTHAEEYDGYAS 394

Query: 1160 ETDGEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGASYKPDSEDPID 981
            ETD +                                         S   YK D+ED  D
Sbjct: 395  ETDDDSQRYDNDDMEDPVDEDFGEDDHYD-----------------SSPPYKSDTEDESD 437

Query: 980  FSDTTTASSPSWLDKIQDTVRNIFQSVNIFQTPIDKSEASRIKKEYEDSSSKLSKIQSRI 801
            FSD T+ S+PSWL+KIQ TVRNI  +VN+FQTP+DKSEA+ I+KEY++SS+KLSK+QSRI
Sbjct: 438  FSDITSTSNPSWLEKIQQTVRNILNAVNLFQTPVDKSEAAHIRKEYDESSAKLSKMQSRI 497

Query: 800  SSLKEKLKHDVGMEKEFYSFYDRCFENKQNKYVYKVCPFKQASQVEGHSKTQLGHWEKFE 621
            SSL +KLKHD G EKEFYSFYD+CFE+K+NKYVYK+CPFKQASQ EGHS T+LG W+KFE
Sbjct: 498  SSLTQKLKHDFGPEKEFYSFYDQCFESKENKYVYKLCPFKQASQEEGHSTTRLGRWDKFE 557

Query: 620  DSYRFMVFSNGDKCWNGPDRSLKVKLRCGLTNDLTDVDEPSRCEYVALLSTPALCLDERL 441
            DSYR M+FSNG+KCWNGPDRSLKVKLRCGL N++TDVDEPSRCEYVALLSTPALCL+E+L
Sbjct: 558  DSYRTMLFSNGEKCWNGPDRSLKVKLRCGLKNEVTDVDEPSRCEYVALLSTPALCLEEKL 617

Query: 440  KELQHKLDLMNLEQPQ 393
            KELQ KL+LMN EQPQ
Sbjct: 618  KELQQKLELMNQEQPQ 633


>ref|XP_003529450.1| PREDICTED: glucosidase 2 subunit beta-like [Glycine max]
          Length = 634

 Score =  367 bits (941), Expect = 6e-99
 Identities = 187/317 (58%), Positives = 224/317 (70%)
 Frame = -3

Query: 1337 SESTAELSKEELGRLVASRWTGENVEQKTKNVNDAKLXXXXXXXXXXXXXXEDNAGYSSE 1158
            SE+T  LS+EELGRLVASRWTGEN + K+    D  L              E+  GY+SE
Sbjct: 327  SENTEGLSREELGRLVASRWTGENTD-KSSAEPDTTLDNEDHEDLPKGTNNEEYEGYASE 385

Query: 1157 TDGEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGASYKPDSEDPIDF 978
            TD ++                                          +SYK DS++  DF
Sbjct: 386  TDDDIDSNKYDDDSHKYDDEDEVDEEYREDEHDDLT-----------SSYKSDSDNEPDF 434

Query: 977  SDTTTASSPSWLDKIQDTVRNIFQSVNIFQTPIDKSEASRIKKEYEDSSSKLSKIQSRIS 798
            S  TT  +PSWL+KIQ TVRNIFQ+VN+FQ P+++S+A+R++KEY++SS+KLSKIQSRIS
Sbjct: 435  SYGTTTDNPSWLEKIQRTVRNIFQAVNLFQAPVNQSDAARVRKEYDESSAKLSKIQSRIS 494

Query: 797  SLKEKLKHDVGMEKEFYSFYDRCFENKQNKYVYKVCPFKQASQVEGHSKTQLGHWEKFED 618
            SLK+KLKHD G  KEFYSFYD CFE K+NKY YKVCP+KQASQ EG+S T+LG W+KFED
Sbjct: 495  SLKQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSNTRLGSWDKFED 554

Query: 617  SYRFMVFSNGDKCWNGPDRSLKVKLRCGLTNDLTDVDEPSRCEYVALLSTPALCLDERLK 438
            SYR MVFSNGDKCWNGPDRSLKVKLRCGL N++TDVDEPSRCEYVA+LSTPALC +ERLK
Sbjct: 555  SYRVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVAVLSTPALCQEERLK 614

Query: 437  ELQHKLDLMNLEQPQSH 387
            ELQHKLDL+N E P +H
Sbjct: 615  ELQHKLDLLNSEIPSNH 631


>ref|XP_002299093.1| predicted protein [Populus trichocarpa] gi|222846351|gb|EEE83898.1|
            predicted protein [Populus trichocarpa]
          Length = 635

 Score =  362 bits (928), Expect = 2e-97
 Identities = 190/348 (54%), Positives = 229/348 (65%), Gaps = 1/348 (0%)
 Frame = -3

Query: 1427 KDNIMVEAETGHXXXXXXXXXXXXXXXXDESESTAELSKEELGRLVASRWTGENVEQKTK 1248
            KD   +  ETGH                DES     LSKEELGRLV SRWTG N E++T+
Sbjct: 302  KDESTLVPETGHDAGNEVSHAQPMEEEKDESTDAKGLSKEELGRLVGSRWTG-NSEKQTE 360

Query: 1247 NVNDAKLXXXXXXXXXXXXXXEDNA-GYSSETDGEVSXXXXXXXXXXXXXXXXXXXXXXX 1071
             V D K               ++   GY+SET  E                         
Sbjct: 361  EVRDTKDNDHGDHEEMAHDTHDEKYDGYASETADETGKDDDVDGEDDVDETYEEEVHDDV 420

Query: 1070 XXXXXXXXXXXXXXXDSGASYKPDSEDPIDFSDTTTASSPSWLDKIQDTVRNIFQSVNIF 891
                              A YK DS+D ++FSDTT+  +PSWL+ IQ T R+I ++  +F
Sbjct: 421  ----------------DDAPYKSDSDDEVEFSDTTSPGNPSWLENIQQTFRSILEAFKLF 464

Query: 890  QTPIDKSEASRIKKEYEDSSSKLSKIQSRISSLKEKLKHDVGMEKEFYSFYDRCFENKQN 711
            QTP+DKSEA+R++KEY++SS+KLSKIQSRIS L +KL+HD G EKEFYSFYDRCFE+KQN
Sbjct: 465  QTPVDKSEAARVRKEYDESSAKLSKIQSRISRLTQKLEHDFGTEKEFYSFYDRCFESKQN 524

Query: 710  KYVYKVCPFKQASQVEGHSKTQLGHWEKFEDSYRFMVFSNGDKCWNGPDRSLKVKLRCGL 531
            KYVYKVC FKQASQ EGHS T+LG WEKFEDSYR MVFSNGD CWNGPDRSLKV+LRCGL
Sbjct: 525  KYVYKVCSFKQASQSEGHSTTRLGRWEKFEDSYRVMVFSNGDTCWNGPDRSLKVRLRCGL 584

Query: 530  TNDLTDVDEPSRCEYVALLSTPALCLDERLKELQHKLDLMNLEQPQSH 387
             N++TDVDEPSRCEYVALLSTPALC++ +LKEL++KL+LMN +QP+SH
Sbjct: 585  DNEVTDVDEPSRCEYVALLSTPALCIEGKLKELENKLELMNKQQPRSH 632


>ref|XP_003607830.1| Glucosidase ii beta subunit [Medicago truncatula]
            gi|355508885|gb|AES90027.1| Glucosidase ii beta subunit
            [Medicago truncatula]
          Length = 639

 Score =  356 bits (914), Expect = 8e-96
 Identities = 196/363 (53%), Positives = 238/363 (65%), Gaps = 1/363 (0%)
 Frame = -3

Query: 1475 ESKLSSSDSVKQESDDKDNI-MVEAETGHXXXXXXXXXXXXXXXXDESESTAELSKEELG 1299
            ES+ S  D V++ + + +    VE+ET                  + SE+T  LSKEELG
Sbjct: 286  ESEGSLFDKVEENAKEAEREPTVESETDLTTGKTESSDEAIDTGKEASENTDGLSKEELG 345

Query: 1298 RLVASRWTGENVEQKTKNVNDAKLXXXXXXXXXXXXXXEDNAGYSSETDGEVSXXXXXXX 1119
            RLVASRWTGE+V +K+   N A L              E+N GY+SETD + S       
Sbjct: 346  RLVASRWTGEDVGKKSVEANTA-LDNEDQEDILHGTNNEENEGYASETDDDTSKYDDDTG 404

Query: 1118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGASYKPDSEDPIDFSDTTTASSPSWLD 939
                                              +SYK D E   D SD      PSWL+
Sbjct: 405  KYDDDTGKYDEDINDEEFQEDEHEDL-------SSSYKSDVESEPDLSD-----DPSWLE 452

Query: 938  KIQDTVRNIFQSVNIFQTPIDKSEASRIKKEYEDSSSKLSKIQSRISSLKEKLKHDVGME 759
            KIQ +V NI Q VNIFQTP+++S+A+RI+KEY++SS+KLSKIQSRISSL +K K D G  
Sbjct: 453  KIQKSVWNIIQVVNIFQTPVNQSDAARIRKEYDESSAKLSKIQSRISSLTQKQKLDFGPA 512

Query: 758  KEFYSFYDRCFENKQNKYVYKVCPFKQASQVEGHSKTQLGHWEKFEDSYRFMVFSNGDKC 579
            KEFYSFYDRCFE+KQNKY+YKVCP+KQASQ EGHS T+LG W+KFEDSY+ MVFSNGD C
Sbjct: 513  KEFYSFYDRCFESKQNKYIYKVCPYKQASQEEGHSTTRLGRWDKFEDSYKVMVFSNGDHC 572

Query: 578  WNGPDRSLKVKLRCGLTNDLTDVDEPSRCEYVALLSTPALCLDERLKELQHKLDLMNLEQ 399
            WNGPDRSLKVKL+CGLTN++TDVDEPSRCEYVALL+TPALC +E+LKELQHKLDL+N EQ
Sbjct: 573  WNGPDRSLKVKLKCGLTNEITDVDEPSRCEYVALLATPALCQEEKLKELQHKLDLLNSEQ 632

Query: 398  PQS 390
            P+S
Sbjct: 633  PES 635


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