BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004589
         (3653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1408   0.0  
ref|XP_002321582.1| rna-dependent RNA polymerase [Populus tricho...  1339   0.0  
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1337   0.0  
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]             1304   0.0  
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]             1303   0.0  

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1408 bits (3645), Expect = 0.0
 Identities = 712/1122 (63%), Positives = 859/1122 (76%), Gaps = 2/1122 (0%)
 Frame = +1

Query: 115  TVKVSKIPLTAIAQELYDFFETTLGQKGTVFACQIFSEHKNWKSKGVGRVQFESLTELNT 294
            TVKVS IP TAIA+EL+ F E+ LG   T++A +I +EHKNWKS+G GRVQFE+L     
Sbjct: 8    TVKVSNIPKTAIAKELWSFLESKLGPN-TIYALEIATEHKNWKSRGFGRVQFETLQAKRA 66

Query: 295  VLQLSEQRKLVFQNTLLDITLSPIDIIPRPSVVSNRISEVVLHVGFMVEEDCLTVLEKWE 474
               LS Q  LVF+ + L I+ +  DII RP    N++   VLHVGF+VE+DC+ VLE WE
Sbjct: 67   ADLLSLQGDLVFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDCMLVLESWE 126

Query: 475  NVKVEIMPDRKRVEFWVSEKGEVYKLEVQFEDILDTSVWYLDGEESNALLFKLKYAPKIY 654
             VK  +MP+R RVEFWV + GE YKLEV F+D+L++S   L G + NALL KLKYAPKI+
Sbjct: 127  GVKTLVMPERNRVEFWVDKDGERYKLEVPFDDVLESSACCLGGGKVNALLLKLKYAPKIF 186

Query: 655  QRFAGPTLASKFSADRYHICKENVEFLWIRTTDFSVLKSIGNSSSFCWKLRKGSIPLDTL 834
            Q+FAGP +ASKFSADRYHI KE+ EFLW+RTTDFS +KS+G S+SFCW++++G   LD  
Sbjct: 187  QKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWEIKEGFPALDIF 246

Query: 835  ASFPHYQEEINTLSLKEPLEKFGTACEIVPLIKCQSDYHLDYEIFFQLNALVHSQKISFA 1014
            ASFP+Y++ +  L+L++  E F +   +VPL+KC+S   L YEI FQLN+LVH+QKIS A
Sbjct: 247  ASFPYYKD-LTELTLEQG-EGFCSDSGLVPLVKCESGPKLAYEILFQLNSLVHAQKISLA 304

Query: 1015 AVNXXXXXXXXXXXXXTASVILQKLQTVESTCYEPSFFVQSXXXXXXXXXXXXPSISQSM 1194
            AV+             TA +ILQKL   +ST Y+P  F+++            P  S S 
Sbjct: 305  AVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIKNLPPSSHSR 364

Query: 1195 LKEQNLFSCHRTLVTPTKVYLLGPDIETSNYVVKHYTEHASDFLRVTFVEEDWSKLTSDA 1374
            L   N+ SCHR LVTP+K+Y LGP++E+SNYVVKHY  +ASDF+RV+FVEEDWSKL S+A
Sbjct: 365  LTNNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVEEDWSKLPSNA 424

Query: 1375 LSTIIEQGLFSKPHRTPIYHRILSILRDGIEIGSKRFEFLAFSASQLRSSSVWMFASNST 1554
            LS  I +  F+ P RT IYHRILSILR+GI IG+KRF+FLAFSASQLRS+SVWMFASN  
Sbjct: 425  LSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSNSVWMFASNDK 484

Query: 1555 VKTEDIREWMGCFKAIRSVSKCAARMGQLFSSSQQTLVVPKHDVVSIPDIEVTTDGIPYC 1734
            V+ +DIREWMGCFK IRSVSKCAARMGQLFSSS QTL VP  DV  IPDIEVT+DG  YC
Sbjct: 485  VRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDIEVTSDGFGYC 544

Query: 1735 FSDGIGKISLKLAKQVAQKCGWSQTPSAFQIRYGGYKGVVAVDRSSFKKLSLRPSMLKFK 1914
            FSDGIGKISL  AKQVAQKCG  QTPSAFQIRYGGYKGV+AVDR+SF+KLSLR SMLKF+
Sbjct: 545  FSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKLSLRSSMLKFE 604

Query: 1915 SENRMLNVTSHTESLPCFLNREIVTLLSTLGIQDEKFEAMRHEQVQFLDEMLTNGEAALD 2094
            S+NRMLNVT  +ES PC+LNREIV+LLSTLG++DE FEA+ +EQ+  LD+MLTN +AALD
Sbjct: 605  SQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDKMLTNRQAALD 664

Query: 2095 VLASTG--DTKSILVNMLLQGYKPSKEPYLCMMLKSYRAYQLADIRSKCRVFVPKGRVLM 2268
            VL S G  D K+IL  MLLQGY+P+ EPYL MML++YR  QL+DIR++CR+FVPK RVL+
Sbjct: 665  VLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCRIFVPKARVLI 724

Query: 2269 GCLDETGTLSYGQVYVRVTKTRAELQSGEQTFFRKXXXXXXXXXXXXXXXXXXXXNPCLH 2448
            GCLDETG L+YGQVYVRVT T+AE +   Q+FF+K                    NPCLH
Sbjct: 725  GCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQK----VDDTTSVVIGKVIVTKNPCLH 780

Query: 2449 PGDIRVLQAVYEPALVEKGFVDCLVFPQKGDRPHPNECSGGDLDGDLFFLCWDENLIPMH 2628
            PGDIRVL AVYE  L EKG VDC++FPQKG+RPHPNECSGGDLDGD FF+CWDE LIP  
Sbjct: 781  PGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWDEGLIPSQ 840

Query: 2629 PDRPMDYIARRQRILDHEVTLEEIQEFFVNYMINDNLGVIATAHLVHADREPEKARSKKC 2808
             + PMDY +RR RI+DH+VTLEEIQ+FFV+YMIND LGVI+TAHLVHADREPEKARSKKC
Sbjct: 841  TEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPEKARSKKC 900

Query: 2809 LNLATLHSMAVDFAKNGAPAEMPGELKPKVYPDFMEREDRPMYVSPGVLGKLYRATIAST 2988
            L LATLHSMAVDFAK GAPAEMP  LKPK +PDFMER D+PMY+S G LGKLYRATIAS 
Sbjct: 901  LELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLYRATIASR 960

Query: 2989 ENQEPNFIWSEKVAEAAYDHDLEVNGFESLLEIAESCKMMYREKLSFLMNYYGAGREEEI 3168
             N++ +F+WS  +  AAYDHDLEV+GFE+ LEIA+  K MY EK++ LMN+YGA  E+E+
Sbjct: 961  VNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYGAESEDEM 1020

Query: 3169 LTGNLQNRSMYLDRDKRKYREVKDRILTSIKSLQREARGWFNGSCEECDYTKMASAWYHV 3348
            LTGNL+N+ MYL RD R++ E+KDRIL S+KSLQ+EA+ W  GSC+   + KMASAWYHV
Sbjct: 1021 LTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKMASAWYHV 1080

Query: 3349 TYHPKYCKDSTNCLSFPWSVGENLLNIKSVKSRRV*TVNRYC 3474
            TYH  +   + N LSFPW VGE LL IKS  SR+  T    C
Sbjct: 1081 TYHSTFSSQTPNFLSFPWIVGEVLLVIKSANSRKAETSKDNC 1122


>ref|XP_002321582.1| rna-dependent RNA polymerase [Populus trichocarpa]
            gi|222868578|gb|EEF05709.1| rna-dependent RNA polymerase
            [Populus trichocarpa]
          Length = 1110

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 677/1114 (60%), Positives = 833/1114 (74%), Gaps = 3/1114 (0%)
 Frame = +1

Query: 115  TVKVSKIPLTAIAQELYDFFETTLGQKGTVFACQIFSEHKNWKSKGVGRVQFESLTELNT 294
            +V+V+ IP T  A+E+  +    LG K +VFA +I +  KNW S+G GRVQF SL   + 
Sbjct: 9    SVRVTNIPQTITAKEILQYLVAQLG-KDSVFAIEISTVRKNWNSRGFGRVQFSSLEVKHE 67

Query: 295  VLQLSEQRKLVFQNTLLDITLSPIDIIPRPSVVSNRISEVVLHVGFMVEEDCLTVLEKWE 474
             L LS + KLV ++  L ++ +  DIIPRP    NR+   VL+VGFM +E  L VLE WE
Sbjct: 68   ALSLSLKNKLVLKSQNLKLSETYDDIIPRPVKDQNRMENGVLYVGFMKKETTLCVLEYWE 127

Query: 475  NVKVEIMPDRKRVEFWVSEKGEV-YKLEVQFEDILDTSVWYLDGEESNALLFKLKYAPKI 651
             V+   MP+R+R+EFW+    E  YKL V+FEDIL+   + LDG++ NA++ KL+Y P+I
Sbjct: 128  GVRGWFMPERRRIEFWIRVGQEFRYKLVVEFEDILEAVGYPLDGDKVNAVVLKLRYGPRI 187

Query: 652  YQRFAGPTLASKFSADRYHICKENVEFLWIRTTDFSVLKSIGNSSSFCWKLRKGSIPLDT 831
            YQ+ +GP +ASKFS +RY  CKE+ +FLW+RTTD S +KSIG S+SFCW++ +G    DT
Sbjct: 188  YQKISGPGIASKFSTNRYFYCKEDFDFLWVRTTDISAIKSIGQSTSFCWEIGEGLEASDT 247

Query: 832  LASFPHYQEEINTLSLKEPLEKFGTACEIVPLIKCQSDYHLDYEIFFQLNALVHSQKISF 1011
              +FP+YQE++N L L++  E+F +A E VPLI+C SD  L YE+ FQLN+LVH+QKIS 
Sbjct: 248  FRNFPYYQEDMNRLDLEDG-EEFCSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISL 305

Query: 1012 AAVNXXXXXXXXXXXXXTASVILQKLQTVESTCYEPSFFVQSXXXXXXXXXXXXPSISQS 1191
            AAV+             TA +ILQKL  ++ TCY+P  FV+              S    
Sbjct: 306  AAVDSDLIKILRNLTVNTAIIILQKLHKLKMTCYDPLSFVKQSLRESL-------SSPPK 358

Query: 1192 MLKEQNLFSCHRTLVTPTKVYLLGPDIETSNYVVKHYTEHASDFLRVTFVEEDWSKLTSD 1371
             L E N+ SCHR L+TP+K++ LGP+ ETSNYVVKH+ ++ASDF+RVTFVEEDWSKL ++
Sbjct: 359  SLTENNIMSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPAN 418

Query: 1372 ALSTIIEQGLFSKPHRTPIYHRILSILRDGIEIGSKRFEFLAFSASQLRSSSVWMFASNS 1551
            A+ST I++G+F+KP RT IYHRILSILRDG  IG+KRFEFLAFSASQLRS+SVWMFASN+
Sbjct: 419  AISTSIQRGIFAKPFRTGIYHRILSILRDGFVIGAKRFEFLAFSASQLRSNSVWMFASNN 478

Query: 1552 TVKTEDIREWMGCFKAIRSVSKCAARMGQLFSSSQQTLVVPKHDVVSIPDIEVTTDGIPY 1731
             VK EDIR+WMGCF  IRSVSKCAARMGQLFSSS QT VVP  DV  IPDIEVTTDGI Y
Sbjct: 479  GVKAEDIRKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIEVTTDGIDY 538

Query: 1732 CFSDGIGKISLKLAKQVAQKCGWSQTPSAFQIRYGGYKGVVAVDRSSFKKLSLRPSMLKF 1911
            CFSDGIGKISL  AKQVA KCG S TPSAFQIRYGGYKGVVAVDR+SF+KLSLR SMLKF
Sbjct: 539  CFSDGIGKISLSFAKQVAHKCGLSHTPSAFQIRYGGYKGVVAVDRNSFRKLSLRSSMLKF 598

Query: 1912 KSENRMLNVTSHTESLPCFLNREIVTLLSTLGIQDEKFEAMRHEQVQFLDEMLTNGEAAL 2091
             SENRMLNVT  +ES+PC+LNREI++LLSTLG+ DE F+A++ +Q+  L +MLTN E+AL
Sbjct: 599  DSENRMLNVTKWSESMPCYLNREIISLLSTLGVADEIFQALQQKQLYRLRKMLTNKESAL 658

Query: 2092 DVLASTG--DTKSILVNMLLQGYKPSKEPYLCMMLKSYRAYQLADIRSKCRVFVPKGRVL 2265
            DVL +    D+K+ILV MLLQGY+P+ EPYL MML++Y    L ++RS+CR+FVPKGR+L
Sbjct: 659  DVLENLAWADSKNILVQMLLQGYEPNVEPYLSMMLQAYHENSLMELRSRCRIFVPKGRIL 718

Query: 2266 MGCLDETGTLSYGQVYVRVTKTRAELQSGEQTFFRKXXXXXXXXXXXXXXXXXXXXNPCL 2445
            +GCLDE+G L YGQVYVR+T T+AELQ  +Q+FFRK                    NPCL
Sbjct: 719  IGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTSTIIGEVAVTK----NPCL 774

Query: 2446 HPGDIRVLQAVYEPALVEKGFVDCLVFPQKGDRPHPNECSGGDLDGDLFFLCWDENLIPM 2625
            HPGDIRVL+AVY+  L EKG VDC++FPQ G RPHPNECSGGDLDGD FF+ WDE L+P 
Sbjct: 775  HPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDGDQFFISWDEGLLPC 834

Query: 2626 HPDRPMDYIARRQRILDHEVTLEEIQEFFVNYMINDNLGVIATAHLVHADREPEKARSKK 2805
            H + PMDY+  RQRI+DH VTLEEIQ FFV+YMIND LG I+TAHLVHAD EP+KARS+K
Sbjct: 835  HTEAPMDYVGGRQRIMDHNVTLEEIQRFFVDYMINDTLGAISTAHLVHADCEPDKARSEK 894

Query: 2806 CLNLATLHSMAVDFAKNGAPAEMPGELKPKVYPDFMEREDRPMYVSPGVLGKLYRATIAS 2985
            CL LATLHSMAVDFAK GAPAEMP  LKP+ +PDFMER ++ MY+S GVLGKLYR    S
Sbjct: 895  CLQLATLHSMAVDFAKTGAPAEMPLYLKPREFPDFMERAEKQMYISDGVLGKLYRDIHDS 954

Query: 2986 TENQEPNFIWSEKVAEAAYDHDLEVNGFESLLEIAESCKMMYREKLSFLMNYYGAGREEE 3165
            T  +  NF+WS+K+AEA YD DLEV GFE  L IA   K  Y EK+S LM+YYGA  E+E
Sbjct: 955  TRQERSNFMWSKKIAEATYDQDLEVKGFEDFLGIASIYKEKYMEKMSTLMDYYGAKTEDE 1014

Query: 3166 ILTGNLQNRSMYLDRDKRKYREVKDRILTSIKSLQREARGWFNGSCEECDYTKMASAWYH 3345
            ILTGNL++R  YL RD RKY +VKDRIL S+K+L++EA+ WF  SC   ++  MASAWYH
Sbjct: 1015 ILTGNLRHRPTYLQRDNRKYGDVKDRILVSLKNLKKEAKEWFESSCNPTEHQCMASAWYH 1074

Query: 3346 VTYHPKYCKDSTNCLSFPWSVGENLLNIKSVKSR 3447
            VTYHP Y  +  NCLSFPW VG+ LLNIKS+ SR
Sbjct: 1075 VTYHPTYFHERMNCLSFPWIVGDILLNIKSLNSR 1108


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1337 bits (3459), Expect = 0.0
 Identities = 671/1118 (60%), Positives = 839/1118 (75%), Gaps = 3/1118 (0%)
 Frame = +1

Query: 109  SATVKVSKIPLTAIAQELYDFFETTLGQKGTVFACQIFSEHKNWKSKGVGRVQFESLTEL 288
            +ATV+VS IP TAIA++L+DFFE+++G KG+VFAC IFSEHKNWKS+G GRVQFE+    
Sbjct: 8    TATVRVSNIPQTAIAKQLFDFFESSIG-KGSVFACDIFSEHKNWKSRGHGRVQFETSQSK 66

Query: 289  NTVLQLSEQRKLVFQNTLLDITLSPIDIIPRPSVVSNRISEVVLHVGFMVEEDCLTVLEK 468
               L LSEQ KLVF+   L +T S  DII RP  ++ R  + +LH G ++E D + VLE 
Sbjct: 67   LQSLSLSEQGKLVFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDYMEVLET 126

Query: 469  WENVKVEIMPDRKRVEFWVSE-KGEVYKLEVQFEDILDTSVWYLDGEESNALLFKLKYAP 645
            WENVK  IMP+RK +EFWVS  KGE Y+LEVQF DI++T    L+ +E  ALL KLK+AP
Sbjct: 127  WENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLE-DEKTALLLKLKHAP 185

Query: 646  KIYQRFAGPTLASKFSADRYHICKENVEFLWIRTTDFSVLKSIGNSSSFCWKLRKGSIPL 825
            K+YQR +GP +ASKFS+DRYH+C+E+ EFLW+RTTDFS +KSIG SSS CW++  G +  
Sbjct: 186  KLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIEDGLLSS 245

Query: 826  DTLASFPHYQEEINTLSLKEPLEKFGTACEIVPLIKCQSDYHLDYEIFFQLNALVHSQKI 1005
            D L+  P+   ++  L L E  + + +A E+VPL    SD  L YEI FQLN+L+H+ KI
Sbjct: 246  DLLSGLPYCNNDVMDLVLDEVGDIY-SASELVPLASFPSDLKLPYEILFQLNSLIHTHKI 304

Query: 1006 SFAAVNXXXXXXXXXXXXXTASVILQKLQTVESTCYEPSFFVQSXXXXXXXXXXXXPSIS 1185
            S  AV              TA +ILQK+  ++STC+EP  F+++            PS S
Sbjct: 305  SLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQPSSS 364

Query: 1186 QSMLKEQNLFSCHRTLVTPTKVYLLGPDIETSNYVVKHYTEHASDFLRVTFVEEDWSKLT 1365
             S L  QN+ S HR LVTP+KVY LGP++ETSNY+VK++  HASDFLRVTFVEEDW KL+
Sbjct: 365  YSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWGKLS 424

Query: 1366 SDALSTIIEQGLFSKPHRTPIYHRILSILRDGIEIGSKRFEFLAFSASQLRSSSVWMFAS 1545
             +A+S  +EQG+F+KP+RT IYHRILSILRDG+ IGSKRF FLAFSASQLRS+SVWMFAS
Sbjct: 425  PNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWMFAS 484

Query: 1546 NSTVKTEDIREWMGCFKAIRSVSKCAARMGQLFSSSQQTLVVPKHDVVSIPDIEVTTDGI 1725
            N  VK EDIREWMGCF  IRSVSKCAARMGQLFS+S QT+ V    V  +PDIEVT+DG+
Sbjct: 485  NEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTSDGV 544

Query: 1726 PYCFSDGIGKISLKLAKQVAQKCGWSQTPSAFQIRYGGYKGVVAVDRSSFKKLSLRPSML 1905
             YCFSDGIGKIS   A QVAQKCG S TPSAFQIRYGGYKGV+AVDR+SF+KLSLR SML
Sbjct: 545  SYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRGSML 604

Query: 1906 KFKSENRMLNVTSHTESLPCFLNREIVTLLSTLGIQDEKFEAMRHEQVQFLDEMLTNGEA 2085
            KF+S+NRMLN+T  ++++PC+LNREIV LLSTLG++D+ FE +    +  L +MLT  EA
Sbjct: 605  KFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTTNEA 664

Query: 2086 ALDVLAST--GDTKSILVNMLLQGYKPSKEPYLCMMLKSYRAYQLADIRSKCRVFVPKGR 2259
            ALDVL S   GD K IL+ ML QGY P+ EPYL MML+S+   QL+D+RS+CR+F+ KGR
Sbjct: 665  ALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIHKGR 724

Query: 2260 VLMGCLDETGTLSYGQVYVRVTKTRAELQSGEQTFFRKXXXXXXXXXXXXXXXXXXXXNP 2439
            VL+GCLDETG L+YGQVY R+T T+AELQS +Q+FF+K                    NP
Sbjct: 725  VLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQK----VDETTAVVRGNVVVTKNP 780

Query: 2440 CLHPGDIRVLQAVYEPALVEKGFVDCLVFPQKGDRPHPNECSGGDLDGDLFFLCWDENLI 2619
            CLHPGD+RVL+AVYE AL EK +VDC++FPQKG+RPHPNECSGGDLDGDL+F+ WDENLI
Sbjct: 781  CLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLI 840

Query: 2620 PMHPDRPMDYIARRQRILDHEVTLEEIQEFFVNYMINDNLGVIATAHLVHADREPEKARS 2799
            P     PMDY  RR RI+DHEVTL+EIQ FFV+YMI+D LG I+TAHLVHADREP+KA +
Sbjct: 841  PRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALN 900

Query: 2800 KKCLNLATLHSMAVDFAKNGAPAEMPGELKPKVYPDFMEREDRPMYVSPGVLGKLYRATI 2979
             KCL LATLHSMAVDFAK GA AEMP  LKP+ +PDF+ER D+PMY+S GVLGKLYRA +
Sbjct: 901  PKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIV 960

Query: 2980 ASTENQEPNFIWSEKVAEAAYDHDLEVNGFESLLEIAESCKMMYREKLSFLMNYYGAGRE 3159
             S+     + + S +  + AYDH L  +G+E+ +E A++ K  Y ++++ L+NYYGA +E
Sbjct: 961  NSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKE 1020

Query: 3160 EEILTGNLQNRSMYLDRDKRKYREVKDRILTSIKSLQREARGWFNGSCEECDYTKMASAW 3339
             EILTGNL+ +S+YL RD R+Y E+KDRIL S KSLQ+E +GWF G C+E ++ K+ASAW
Sbjct: 1021 VEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAW 1080

Query: 3340 YHVTYHPKYCKDSTNCLSFPWSVGENLLNIKSVKSRRV 3453
            YHVTYHP YC+ S NCL FPW VG+ LL+IK   +R++
Sbjct: 1081 YHVTYHPSYCEGSANCLGFPWVVGDILLDIKLHNTRKI 1118


>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1304 bits (3374), Expect = 0.0
 Identities = 658/1114 (59%), Positives = 828/1114 (74%), Gaps = 3/1114 (0%)
 Frame = +1

Query: 103  VKSATVKVSKIPLTAIAQELYDFFETTLGQKGTVFACQIFSEHKNWKSKGVGRVQFESLT 282
            ++  T++++ IP TA+A++L DFFE+ LG   +VFA +I ++  NWKS+G GRVQF +  
Sbjct: 6    IERPTLRLTHIPQTAVAKDLLDFFESKLGPD-SVFAIEISTDRNNWKSRGFGRVQFAAPQ 64

Query: 283  ELNTVLQLSEQRKLVFQNTLLDITLSPIDIIPRPSVVSNRISEVVLHVGFMVEEDCLTVL 462
              +  L+LS    L+F++  L ++ +  DIIPRP    +R+   VLH GFM  +DCL VL
Sbjct: 65   AKSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVL 124

Query: 463  EKWENVKVEIMPDRKRVEFWVSEKGEVYKLEVQFEDILDTSVWYLDGEESNALLFKLKYA 642
            E+WE V+  IMP+R+R+EFWV   GE YKL+  F+DI +T     DG   NALL +++YA
Sbjct: 125  ERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDIFETVGCCFDGSACNALLLRVRYA 184

Query: 643  PKIYQRFAGPTLASKFSADRYHICKENVEFLWIRTTDFSVLKSIGNSSSFCWKLRKGSIP 822
            P+IYQ+ +GP +ASKFS DRYHICKE  +FLW+RTTDFS +KSIG S+SF W+   G   
Sbjct: 185  PRIYQKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSI 244

Query: 823  LDTLASFPHYQEEINTLSLKEPLEKFGTACEIVPLIKCQSDYHLDYEIFFQLNALVHSQK 1002
             D     P Y+E+I + SL E   +F +  EIVPL+K  SD  L YEI FQLNALVH+QK
Sbjct: 245  SDMSTYLPCYREDIQSPSL-EARREFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQK 303

Query: 1003 ISFAAVNXXXXXXXXXXXXXTASVILQKLQTVESTCYEPSFFVQSXXXXXXXXXXXXPSI 1182
            IS AAV+             TA +ILQKL+ ++S CY P  FV++            P  
Sbjct: 304  ISIAAVDTDLIGILSGLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPTGKNYRI--PLS 361

Query: 1183 SQSMLKEQNLFSCHRTLVTPTKVYLLGPDIETSNYVVKHYTEHASDFLRVTFVEEDWSKL 1362
                LK  N+ SC R L+TPTK+Y LGP++ET+NYVVK++ E+ASDF+RVTFVEEDWSKL
Sbjct: 362  VSERLKNHNVMSCRRALITPTKIYCLGPELETANYVVKNFVEYASDFMRVTFVEEDWSKL 421

Query: 1363 TSDALSTIIEQGLFSKPHRTPIYHRILSILRDGIEIGSKRFEFLAFSASQLRSSSVWMFA 1542
            +++A+ST +  G+FS+P +T IY RIL +L++GI IG KRFEFLAFSASQLRS+SVWMFA
Sbjct: 422  SANAISTGVHLGVFSRPFKTKIYDRILYVLQNGIVIGDKRFEFLAFSASQLRSNSVWMFA 481

Query: 1543 SNSTVKTEDIREWMGCFKAIRSVSKCAARMGQLFSSSQQTLVVPKHDVVSIPDIEVTTDG 1722
            SN  VK EDIREWMGCFK IRS+SKCA+RMGQLFSSS  TLVVP  DV  I DIEV TDG
Sbjct: 482  SNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDG 541

Query: 1723 IPYCFSDGIGKISLKLAKQVAQKCGWSQTPSAFQIRYGGYKGVVAVDRSSFKKLSLRPSM 1902
            I YCFSDGIGKISL  A+QVA+KCG +  PSAFQIRYGGYKGVVAVDR+SF K+SLR SM
Sbjct: 542  INYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSM 601

Query: 1903 LKFKSENRMLNVTSHTESLPCFLNREIVTLLSTLGIQDEKFEAMRHEQVQFLDEMLTNGE 2082
            LKF+S+ RMLNVT  +ES+PCFLNREIVTL STLGI+DE FE M+ EQ+  L +MLTN E
Sbjct: 602  LKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNRE 661

Query: 2083 AALDVLASTG--DTKSILVNMLLQGYKPSKEPYLCMMLKSYRAYQLADIRSKCRVFVPKG 2256
            AALD L S G  ++K+ILV M LQ Y+P+ +PYL MML+++    L+D++S+CR+FVPKG
Sbjct: 662  AALDTLQSLGGVNSKNILVEM-LQFYEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKG 720

Query: 2257 RVLMGCLDETGTLSYGQVYVRVTKTRAELQSGEQTFFRKXXXXXXXXXXXXXXXXXXXXN 2436
            R+L+GCLDETGTL+YGQVY+ +   +AEL+  +Q++FRK                    N
Sbjct: 721  RILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRK----VDEETAIVIGKVVVTKN 776

Query: 2437 PCLHPGDIRVLQAVYEPALVEKGFVDCLVFPQKGDRPHPNECSGGDLDGDLFFLCWDENL 2616
            PCLHPGD+RVL+AVYEP L EKG VDCLVFPQKG+RPHPNECSGGDLDGD FF+ WD++L
Sbjct: 777  PCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 2617 IPMHPDRPMDYIARRQRILDHEVTLEEIQEFFVNYMINDNLGVIATAHLVHADREPEKAR 2796
            IP   + PMDY  RR RI+DHEVTLEEIQ+FFV+YMIND LG I+TAHLVHADREP+KA 
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKAC 896

Query: 2797 SKKCLNLATLHSMAVDFAKNGAPAEMPGELKPKVYPDFMEREDRPMYVSPGVLGKLYRAT 2976
            S+ CL LATLHSMAVDFAK GAPAEMP  LKP+ +PDFM+R ++PMY S GVLGKLYRAT
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 2977 IASTENQEPNFIWSEKVAEAAYDHDLEVNGFESLLEIAESCKMMYREKLSFLMNYYGAGR 3156
            I ST      F+W++++AE  YDHDLEVNGFESL+ +AE+ K MY E++S LM+YY    
Sbjct: 957  INSTVQTRSKFVWTKEMAELVYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 3157 EEEILTGNLQNRSMYLDRDKRKYREVKDRILTSIKSLQREARGWFNGSCEECD-YTKMAS 3333
            E+EILTGN+ N++ +L RD R+Y E+K+RI+ S+K LQREA+ WF  SC + D + K+AS
Sbjct: 1017 EDEILTGNIYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076

Query: 3334 AWYHVTYHPKYCKDSTNCLSFPWSVGENLLNIKS 3435
            AWY+VTYHP Y ++  N LSFPW VG+ LL +KS
Sbjct: 1077 AWYYVTYHPNYFQERMNSLSFPWIVGDILLRVKS 1110


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score = 1303 bits (3371), Expect = 0.0
 Identities = 658/1114 (59%), Positives = 830/1114 (74%), Gaps = 3/1114 (0%)
 Frame = +1

Query: 103  VKSATVKVSKIPLTAIAQELYDFFETTLGQKGTVFACQIFSEHKNWKSKGVGRVQFESLT 282
            ++  T++++ IP TA+A++L DFFE+ LG   +VFA +I ++  NWKS+G GRVQF +  
Sbjct: 6    IERPTLRLTNIPQTAVAKDLLDFFESKLGPD-SVFAIEISTDRNNWKSRGFGRVQFAAPQ 64

Query: 283  ELNTVLQLSEQRKLVFQNTLLDITLSPIDIIPRPSVVSNRISEVVLHVGFMVEEDCLTVL 462
             ++  L+LS    L+F++  L ++ +  DIIPRP    +R+   VLH GFM  +DCL VL
Sbjct: 65   AMSDALRLSRHDHLLFKSHSLKLSRTYDDIIPRPIRADHRLDGGVLHAGFMSSDDCLRVL 124

Query: 463  EKWENVKVEIMPDRKRVEFWVSEKGEVYKLEVQFEDILDTSVWYLDGEESNALLFKLKYA 642
            E+WE V+  IMP+R+R+EFWV   GE YKL+  F+D+ +T     DG   NALL +++YA
Sbjct: 125  ERWEGVRGWIMPERRRLEFWVWTDGECYKLDFLFDDLFETVGCCFDGSACNALLLRVRYA 184

Query: 643  PKIYQRFAGPTLASKFSADRYHICKENVEFLWIRTTDFSVLKSIGNSSSFCWKLRKGSIP 822
            P+ Y++ +GP +ASKFS DRYHICKE  +FLW+RTTDFS +KSIG S+SF W+   G   
Sbjct: 185  PRTYRKVSGPNVASKFSTDRYHICKEKFDFLWVRTTDFSRIKSIGQSTSFYWEFNAGFSI 244

Query: 823  LDTLASFPHYQEEINTLSLKEPLEKFGTACEIVPLIKCQSDYHLDYEIFFQLNALVHSQK 1002
             D     P Y+E+I + SL E   +F +  EIVPL+K  SD  L YEI FQLNALVH+QK
Sbjct: 245  SDMSTYLPCYREDIQSPSL-EARGEFSSPSEIVPLVKFPSDSKLAYEILFQLNALVHTQK 303

Query: 1003 ISFAAVNXXXXXXXXXXXXXTASVILQKLQTVESTCYEPSFFVQSXXXXXXXXXXXXPSI 1182
            IS AAV+             TA +ILQKL+ ++S CY P  FV++            P  
Sbjct: 304  ISIAAVDTDLIGILSVLPVETAVMILQKLRLLQSPCYNPVSFVKAKLPTGKNFRI--PLS 361

Query: 1183 SQSMLKEQNLFSCHRTLVTPTKVYLLGPDIETSNYVVKHYTEHASDFLRVTFVEEDWSKL 1362
                LK  N+ SCHR L+TPTK+Y LGP++ET+NYVVK++ E+ASDF+RVTFVEEDWSKL
Sbjct: 362  VSERLKNHNVMSCHRALITPTKIYCLGPELETANYVVKNFAEYASDFMRVTFVEEDWSKL 421

Query: 1363 TSDALSTIIEQGLFSKPHRTPIYHRILSILRDGIEIGSKRFEFLAFSASQLRSSSVWMFA 1542
            +++A+ST +  G+FS+P +T IY RILSIL++GI IG KRF+FLAFSASQLRS+SVWMFA
Sbjct: 422  SANAISTGVHLGVFSRPFKTKIYDRILSILQNGIVIGDKRFKFLAFSASQLRSNSVWMFA 481

Query: 1543 SNSTVKTEDIREWMGCFKAIRSVSKCAARMGQLFSSSQQTLVVPKHDVVSIPDIEVTTDG 1722
            SN  VK EDIREWMGCFK IRS+SKCA+RMGQLFSSS  TLVVP  DV  I DIEV TDG
Sbjct: 482  SNDEVKAEDIREWMGCFKKIRSISKCASRMGQLFSSSMPTLVVPVQDVEIIDDIEVKTDG 541

Query: 1723 IPYCFSDGIGKISLKLAKQVAQKCGWSQTPSAFQIRYGGYKGVVAVDRSSFKKLSLRPSM 1902
            I YCFSDGIGKISL  A+QVA+KCG +  PSAFQIRYGGYKGVVAVDR+SF K+SLR SM
Sbjct: 542  INYCFSDGIGKISLPFARQVAEKCGLNHIPSAFQIRYGGYKGVVAVDRNSFWKMSLRDSM 601

Query: 1903 LKFKSENRMLNVTSHTESLPCFLNREIVTLLSTLGIQDEKFEAMRHEQVQFLDEMLTNGE 2082
            LKF+S+ RMLNVT  +ES+PCFLNREIVTL STLGI+DE FE M+ EQ+  L +MLTN E
Sbjct: 602  LKFESKVRMLNVTKWSESMPCFLNREIVTLFSTLGIKDEVFERMQEEQLCLLGKMLTNRE 661

Query: 2083 AALDVLASTG--DTKSILVNMLLQGYKPSKEPYLCMMLKSYRAYQLADIRSKCRVFVPKG 2256
            AALD L S G  ++K+ILV M LQ  +P+ +PYL MML+++    L+D++S+CR+FVPKG
Sbjct: 662  AALDTLQSLGGVNSKNILVEM-LQFDEPNVQPYLSMMLQAHYENLLSDLKSRCRIFVPKG 720

Query: 2257 RVLMGCLDETGTLSYGQVYVRVTKTRAELQSGEQTFFRKXXXXXXXXXXXXXXXXXXXXN 2436
            R+L+GCLDETGTL+YGQVY+ +   +AEL+  +Q++FRK                    N
Sbjct: 721  RILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRK----VDEETAIVIGKVVVTKN 776

Query: 2437 PCLHPGDIRVLQAVYEPALVEKGFVDCLVFPQKGDRPHPNECSGGDLDGDLFFLCWDENL 2616
            PCLHPGD+RVL+AVYEP L EKG VDCLVFP+KG+RPHPNECSGGDLDGD FF+ WD++L
Sbjct: 777  PCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWDKDL 836

Query: 2617 IPMHPDRPMDYIARRQRILDHEVTLEEIQEFFVNYMINDNLGVIATAHLVHADREPEKAR 2796
            IP   + PMDY  RR RI+DHEVTLEEIQ+FFV+YMIND LG I+TAHLVHADREP KAR
Sbjct: 837  IPCQTEPPMDYTGRRPRIMDHEVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPYKAR 896

Query: 2797 SKKCLNLATLHSMAVDFAKNGAPAEMPGELKPKVYPDFMEREDRPMYVSPGVLGKLYRAT 2976
            S+ CL LATLHSMAVDFAK GAPAEMP  LKP+ +PDFM+R ++PMY S GVLGKLYRAT
Sbjct: 897  SENCLALATLHSMAVDFAKTGAPAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRAT 956

Query: 2977 IASTENQEPNFIWSEKVAEAAYDHDLEVNGFESLLEIAESCKMMYREKLSFLMNYYGAGR 3156
            I ST      F+W++++AE AYDHDLEVNGFESL+ +AE+ K MY E++S LM+YY    
Sbjct: 957  INSTVQIRSKFVWTKEMAELAYDHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEY 1016

Query: 3157 EEEILTGNLQNRSMYLDRDKRKYREVKDRILTSIKSLQREARGWFNGSCEECD-YTKMAS 3333
            E+EILTGN+ N++ +L RD R+Y E+K+RI+ S+K LQREA+ WF  SC + D + K+AS
Sbjct: 1017 EDEILTGNMYNKAQFLLRDNRRYGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLAS 1076

Query: 3334 AWYHVTYHPKYCKDSTNCLSFPWSVGENLLNIKS 3435
            AWY+VTYHP Y ++  N LSFPW VG+ LL IKS
Sbjct: 1077 AWYYVTYHPNYFEERMNSLSFPWIVGDILLRIKS 1110