BLASTX nr result

ID: Coptis23_contig00004576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004576
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|222866402|gb|EEF03533.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/65 (46%), Positives = 32/65 (49%)
 Frame = +3

Query: 93  KNSFSKRCSSMVKQQKTRFYILGRCVXXXXXXXXXXXXXXXXXXXXXXXXXXSMLLCWRS 272
           KN F +RC SM KQQKTRFYILGRC+                          SMLLCW  
Sbjct: 21  KNGFRRRCLSMAKQQKTRFYILGRCI--------------------------SMLLCWHD 54

Query: 273 HAIPD 287
           HAI D
Sbjct: 55  HAIRD 59


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