BLASTX nr result

ID: Coptis23_contig00004574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004574
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324881.1| predicted protein [Populus trichocarpa] gi|1...   347   6e-93
ref|XP_002309646.1| predicted protein [Populus trichocarpa] gi|2...   341   3e-91
ref|XP_002285449.2| PREDICTED: protein MEMO1-like [Vitis vinifer...   333   8e-89
ref|XP_002515473.1| Protein C2orf4, putative [Ricinus communis] ...   331   2e-88
ref|XP_003544607.1| PREDICTED: protein MEMO1-like [Glycine max]       330   7e-88

>ref|XP_002324881.1| predicted protein [Populus trichocarpa] gi|118483368|gb|ABK93585.1|
            unknown [Populus trichocarpa] gi|222866315|gb|EEF03446.1|
            predicted protein [Populus trichocarpa]
          Length = 291

 Score =  347 bits (889), Expect = 6e-93
 Identities = 163/190 (85%), Positives = 176/190 (92%)
 Frame = +2

Query: 503  IRNASHAGSWYSDDPNKLEEELEGWLGDTGLTKSADVRGVIAPHAGYSYSGRAAAFAFGN 682
            IR  SHAGSWY+D+P KLEEELEGWLG TGLTKS DVRGVIAPHAGYSYSGRAAA+AFGN
Sbjct: 4    IRRPSHAGSWYTDNPKKLEEELEGWLGATGLTKSPDVRGVIAPHAGYSYSGRAAAYAFGN 63

Query: 683  IDPTNISRVFLLGPSHHYYTSKCALSNATVYKTPLGDLPIDLEANNELLATGKFEVMDLR 862
            IDPTNI+RVFLLGPSHHYYT KCALS ATVYKTP+GDLPIDLE   EL ATGKFE+MDL+
Sbjct: 64   IDPTNITRVFLLGPSHHYYTPKCALSTATVYKTPIGDLPIDLEVIEELKATGKFELMDLQ 123

Query: 863  VDEAEHSMEMHLPYLVKVFHGYPVKIVPILVGALNSQNEAMYGQLLAKYVDDPKNFFSVS 1042
            VDEAEHSMEMHLPYLVK+F G+PVK+VPILVGALN+ NEAMYG+LLAKYVDDP NFFSVS
Sbjct: 124  VDEAEHSMEMHLPYLVKIFEGHPVKVVPILVGALNTDNEAMYGRLLAKYVDDPTNFFSVS 183

Query: 1043 SDFCHWGSRY 1072
            SDFCHWGSR+
Sbjct: 184  SDFCHWGSRF 193


>ref|XP_002309646.1| predicted protein [Populus trichocarpa] gi|222855622|gb|EEE93169.1|
            predicted protein [Populus trichocarpa]
          Length = 291

 Score =  341 bits (874), Expect = 3e-91
 Identities = 160/190 (84%), Positives = 173/190 (91%)
 Frame = +2

Query: 503  IRNASHAGSWYSDDPNKLEEELEGWLGDTGLTKSADVRGVIAPHAGYSYSGRAAAFAFGN 682
            IR ASHAGSWY+DDP KLEEELEGWL DTGLTKS DVRGVIAPHAGYSYSGRAAA+AFGN
Sbjct: 4    IRRASHAGSWYTDDPKKLEEELEGWLSDTGLTKSPDVRGVIAPHAGYSYSGRAAAYAFGN 63

Query: 683  IDPTNISRVFLLGPSHHYYTSKCALSNATVYKTPLGDLPIDLEANNELLATGKFEVMDLR 862
            IDPTNI+RVFLLGPSHHYYT KCALS A VYKTP+GDLPIDLE   EL ATGKFE+MDL+
Sbjct: 64   IDPTNITRVFLLGPSHHYYTPKCALSTAAVYKTPIGDLPIDLEVIEELKATGKFELMDLQ 123

Query: 863  VDEAEHSMEMHLPYLVKVFHGYPVKIVPILVGALNSQNEAMYGQLLAKYVDDPKNFFSVS 1042
            VDE EHSMEMHLPYL K+F G+PVK+VPILVGA+++ NEAMYG LLAKYVDDP NFFSVS
Sbjct: 124  VDEHEHSMEMHLPYLAKIFEGHPVKVVPILVGAVSADNEAMYGCLLAKYVDDPTNFFSVS 183

Query: 1043 SDFCHWGSRY 1072
            SDFCHWGSR+
Sbjct: 184  SDFCHWGSRF 193


>ref|XP_002285449.2| PREDICTED: protein MEMO1-like [Vitis vinifera]
            gi|296082111|emb|CBI21116.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  333 bits (853), Expect = 8e-89
 Identities = 157/191 (82%), Positives = 173/191 (90%)
 Frame = +2

Query: 500  IIRNASHAGSWYSDDPNKLEEELEGWLGDTGLTKSADVRGVIAPHAGYSYSGRAAAFAFG 679
            +IR ASHAGSWY+D+P KL EEL+GWL  +GL KS DVRGVIAPHAGYSYSGRAAA+AFG
Sbjct: 3    MIRRASHAGSWYTDNPRKLAEELDGWLRASGLAKSPDVRGVIAPHAGYSYSGRAAAYAFG 62

Query: 680  NIDPTNISRVFLLGPSHHYYTSKCALSNATVYKTPLGDLPIDLEANNELLATGKFEVMDL 859
            NIDP++ISRVFLLGPSHHYYT KCALS ATVYKTP+GDL IDLE   EL ATGKFE+MDL
Sbjct: 63   NIDPSSISRVFLLGPSHHYYTPKCALSRATVYKTPVGDLQIDLEVVEELKATGKFELMDL 122

Query: 860  RVDEAEHSMEMHLPYLVKVFHGYPVKIVPILVGALNSQNEAMYGQLLAKYVDDPKNFFSV 1039
             VDEAEHSMEMHLPYL KVF GYPVKI+PILVGALN++NEAMYG++LAKYVDDP NFFSV
Sbjct: 123  DVDEAEHSMEMHLPYLAKVFDGYPVKIIPILVGALNAENEAMYGRMLAKYVDDPNNFFSV 182

Query: 1040 SSDFCHWGSRY 1072
            SSDFCHWGSR+
Sbjct: 183  SSDFCHWGSRF 193


>ref|XP_002515473.1| Protein C2orf4, putative [Ricinus communis]
            gi|223545417|gb|EEF46922.1| Protein C2orf4, putative
            [Ricinus communis]
          Length = 291

 Score =  331 bits (849), Expect = 2e-88
 Identities = 156/190 (82%), Positives = 169/190 (88%)
 Frame = +2

Query: 503  IRNASHAGSWYSDDPNKLEEELEGWLGDTGLTKSADVRGVIAPHAGYSYSGRAAAFAFGN 682
            IR ASHAGSWY+D+P KL+EEL+GWL    L KS DVRGVIAPHAGYSYSGRAAA+AFGN
Sbjct: 4    IRRASHAGSWYTDNPKKLDEELDGWLKAAALEKSPDVRGVIAPHAGYSYSGRAAAYAFGN 63

Query: 683  IDPTNISRVFLLGPSHHYYTSKCALSNATVYKTPLGDLPIDLEANNELLATGKFEVMDLR 862
            IDP NISR+FLLGPSHHYYT KCALS ATVYKTP+GDLPIDLE   EL ATGKFE+MDLR
Sbjct: 64   IDPANISRIFLLGPSHHYYTPKCALSTATVYKTPIGDLPIDLEVIEELKATGKFELMDLR 123

Query: 863  VDEAEHSMEMHLPYLVKVFHGYPVKIVPILVGALNSQNEAMYGQLLAKYVDDPKNFFSVS 1042
            VDEAEHSMEMHLPYL KVF G+ VK+VPILVGALN+ NEAMYG+LL KYVDDP NFFSVS
Sbjct: 124  VDEAEHSMEMHLPYLAKVFEGHQVKVVPILVGALNADNEAMYGKLLGKYVDDPTNFFSVS 183

Query: 1043 SDFCHWGSRY 1072
            SDFCHWGSR+
Sbjct: 184  SDFCHWGSRF 193


>ref|XP_003544607.1| PREDICTED: protein MEMO1-like [Glycine max]
          Length = 296

 Score =  330 bits (845), Expect = 7e-88
 Identities = 152/190 (80%), Positives = 172/190 (90%)
 Frame = +2

Query: 503  IRNASHAGSWYSDDPNKLEEELEGWLGDTGLTKSADVRGVIAPHAGYSYSGRAAAFAFGN 682
            +R  SHAGSWY+D+P +L EELEGWL   GLTKS+DVRGVIAPHAGYSYSGRAAA+AFGN
Sbjct: 5    VRRPSHAGSWYTDNPKQLSEELEGWLQSCGLTKSSDVRGVIAPHAGYSYSGRAAAYAFGN 64

Query: 683  IDPTNISRVFLLGPSHHYYTSKCALSNATVYKTPLGDLPIDLEANNELLATGKFEVMDLR 862
            IDP+NI+RVFLLGPSHHYYT KCAL+ ATVYKTP+GDLPIDLE   EL ATGKFE+MD+R
Sbjct: 65   IDPSNITRVFLLGPSHHYYTPKCALTTATVYKTPIGDLPIDLEVTEELKATGKFELMDIR 124

Query: 863  VDEAEHSMEMHLPYLVKVFHGYPVKIVPILVGALNSQNEAMYGQLLAKYVDDPKNFFSVS 1042
            VDEAEHSMEMHLPYL KVF G+ VKIVPILVGA++++NEAMYGQ+LAKYVDD  NFFS+S
Sbjct: 125  VDEAEHSMEMHLPYLAKVFEGHQVKIVPILVGAVSAENEAMYGQILAKYVDDSNNFFSIS 184

Query: 1043 SDFCHWGSRY 1072
            SDFCHWGSR+
Sbjct: 185  SDFCHWGSRF 194


Top