BLASTX nr result

ID: Coptis23_contig00004573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004573
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]   265   1e-68
ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Viti...   263   3e-68
ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycin...   260   3e-67
ref|XP_002517637.1| GTP binding protein, putative [Ricinus commu...   255   9e-66
ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like ...   254   3e-65

>emb|CAN65825.1| hypothetical protein VITISV_034997 [Vitis vinifera]
          Length = 207

 Score =  265 bits (676), Expect = 1e-68
 Identities = 135/202 (66%), Positives = 158/202 (78%)
 Frame = +1

Query: 130 AMVGGSYVFEEETHLTVLKTCLFFAGDGFAAYDNKGERVFRVDSYGHDVRDRHELVLMDV 309
           A+V   +++EEE  LTV KT LFF GDGF  YD KG  VFRVDSY  D RD+ EL+LMD 
Sbjct: 5   AVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELILMDA 64

Query: 310 SGKCLITVRRKRPSLHQRWEGFLGEIIEGQKNEPIFSVRRSSIIGRSAVTVEVYGDNPGE 489
           SG+CL+TVRRKRPSLHQRWEGFLGE I+G+K  PIFSV+RSSIIGRS VTVE+Y  NPGE
Sbjct: 65  SGRCLLTVRRKRPSLHQRWEGFLGEGIDGKK--PIFSVKRSSIIGRSGVTVEMY-SNPGE 121

Query: 490 EYQIDGSFSRRCCDFYNAARETVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLV 669
           +YQI+GSFS RCC  +NA +E+VAE+RRK +AS +V+ GKDVFTL +KPGFD AFAMGLV
Sbjct: 122 DYQIEGSFSHRCCTIFNATKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFDGAFAMGLV 181

Query: 670 LILDQIDVGEFGLFDDGEDQVL 735
           L+LDQI        DD ED  L
Sbjct: 182 LVLDQIS-------DDYEDDGL 196


>ref|XP_002266582.1| PREDICTED: protein LURP-one-related 12 [Vitis vinifera]
           gi|297743462|emb|CBI36329.3| unnamed protein product
           [Vitis vinifera]
          Length = 207

 Score =  263 bits (673), Expect = 3e-68
 Identities = 135/202 (66%), Positives = 158/202 (78%)
 Frame = +1

Query: 130 AMVGGSYVFEEETHLTVLKTCLFFAGDGFAAYDNKGERVFRVDSYGHDVRDRHELVLMDV 309
           A+V   +++EEE  LTV KT LFF GDGF  YD KG  VFRVDSY  D RD+ EL+LMD 
Sbjct: 5   AVVEEGFIYEEEIQLTVFKTSLFFTGDGFTVYDPKGTLVFRVDSYEPDARDKGELILMDA 64

Query: 310 SGKCLITVRRKRPSLHQRWEGFLGEIIEGQKNEPIFSVRRSSIIGRSAVTVEVYGDNPGE 489
           SG+CL+TVRRKRPSLHQRWEGFLGE I+G+K  PIFSV+RSSIIGRS VTVE+Y  NPGE
Sbjct: 65  SGRCLLTVRRKRPSLHQRWEGFLGEGIDGKK--PIFSVKRSSIIGRSGVTVEMY-SNPGE 121

Query: 490 EYQIDGSFSRRCCDFYNAARETVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLV 669
           +YQI+GSFS RCC  +NAA+E+VAE+RRK +AS +V+ GKDVFTL +KPGF  AFAMGLV
Sbjct: 122 DYQIEGSFSHRCCTIFNAAKESVAEIRRKVDASTHVMLGKDVFTLCLKPGFGGAFAMGLV 181

Query: 670 LILDQIDVGEFGLFDDGEDQVL 735
           L+LDQI        DD ED  L
Sbjct: 182 LVLDQIS-------DDYEDDGL 196


>ref|NP_001236323.1| uncharacterized protein LOC100527456 [Glycine max]
           gi|255632396|gb|ACU16548.1| unknown [Glycine max]
          Length = 219

 Score =  260 bits (665), Expect = 3e-67
 Identities = 130/183 (71%), Positives = 153/183 (83%), Gaps = 2/183 (1%)
 Frame = +1

Query: 148 YVFEEETHLTVLKTCLFFAGDGFAAYDNKGERVFRVDSYGHDVRDRHELVLMDVSGKCLI 327
           YVF+EE HLTV KT LFFAGDGF  YD KG+ VFRVDSYG D RDR ELVLMD +G+CL+
Sbjct: 19  YVFKEEIHLTVFKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLL 78

Query: 328 TVRRKRPSLHQRWEGFLGEIIEGQKNEPIFSVRRSSIIGRS--AVTVEVYGDNPGEEYQI 501
           TVRRKRPSLHQRWEGF GE ++G K  PIFSVRR+SIIGRS  ++TVE+Y DNPGEEYQI
Sbjct: 79  TVRRKRPSLHQRWEGFKGERMDGDK--PIFSVRRASIIGRSRASLTVEMY-DNPGEEYQI 135

Query: 502 DGSFSRRCCDFYNAARETVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVLILD 681
           DG FS+RCC  +N  +E+VAE+RRK + + +VV GK+VF+L VKPGFDAAFAMG VL+LD
Sbjct: 136 DGCFSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGKEVFSLCVKPGFDAAFAMGFVLVLD 195

Query: 682 QID 690
           QI+
Sbjct: 196 QIN 198


>ref|XP_002517637.1| GTP binding protein, putative [Ricinus communis]
           gi|223543269|gb|EEF44801.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 206

 Score =  255 bits (652), Expect = 9e-66
 Identities = 127/191 (66%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
 Frame = +1

Query: 133 MVGGSYVFEEETHLTVLKTCLFFAGDGFAAYDNKGERVFRVDSYGH-DVRDRHELVLMDV 309
           +V   Y+++EE HLTVLKT LFFA DGF  YD +GE VFRVDSYG  D R+  E+VLMD 
Sbjct: 6   IVDSGYIYQEEKHLTVLKTSLFFANDGFTVYDCRGELVFRVDSYGGPDNRETAEVVLMDA 65

Query: 310 SGKCLITVRRKRPSLHQRWEGFLGEIIEGQKNEPIFSVRRSSIIGRSAVTVEVYGDNPGE 489
           +G+CL+TVR+KRPSLH RWEG+LGE  EGQK  P+FSVRRSSIIGR +V VEVYG NPGE
Sbjct: 66  NGRCLLTVRKKRPSLHHRWEGYLGERSEGQK--PVFSVRRSSIIGRCSVAVEVYG-NPGE 122

Query: 490 EYQIDGSFSRRCCDFYNAARETVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLV 669
           EYQI+GSF+ R C F+NA +E+VAE+RRK + S +VV GKDVF+L +KPGFD AFAMGLV
Sbjct: 123 EYQIEGSFANRSCTFFNAVKESVAEIRRKVDTSTHVVLGKDVFSLCLKPGFDGAFAMGLV 182

Query: 670 LILDQIDVGEF 702
           L+LDQI+  ++
Sbjct: 183 LVLDQINGDDY 193


>ref|XP_004135854.1| PREDICTED: protein LURP-one-related 12-like [Cucumis sativus]
           gi|449509285|ref|XP_004163545.1| PREDICTED: protein
           LURP-one-related 12-like [Cucumis sativus]
          Length = 206

 Score =  254 bits (648), Expect = 3e-65
 Identities = 127/198 (64%), Positives = 157/198 (79%)
 Frame = +1

Query: 133 MVGGSYVFEEETHLTVLKTCLFFAGDGFAAYDNKGERVFRVDSYGHDVRDRHELVLMDVS 312
           +V  ++V++E+ HLTV+KT LFFAGDG+  YD KGE +FRVDSYG D RD+ E+VLMD  
Sbjct: 7   IVEEAFVYDEDKHLTVMKTSLFFAGDGYTVYDCKGELLFRVDSYGPDARDKDEIVLMDAQ 66

Query: 313 GKCLITVRRKRPSLHQRWEGFLGEIIEGQKNEPIFSVRRSSIIGRSAVTVEVYGDNPGEE 492
           GKCL+TVRRKRPSLH RWEGFLGE  EGQK  PIF+VRRSSIIGRS++TVEV  D+ G+E
Sbjct: 67  GKCLLTVRRKRPSLHHRWEGFLGERTEGQK--PIFNVRRSSIIGRSSMTVEVLKDS-GDE 123

Query: 493 YQIDGSFSRRCCDFYNAARETVAEVRRKANASANVVFGKDVFTLVVKPGFDAAFAMGLVL 672
           Y I+G F  R C  ++AA+E VAE++RK +A+ NVV GKDVF+L++KPGFD AFAMGLVL
Sbjct: 124 YHIEGCFGNRHCTIFDAAKEAVAEIKRKVDATTNVVLGKDVFSLIIKPGFDGAFAMGLVL 183

Query: 673 ILDQIDVGEFGLFDDGED 726
           +LDQI+   F    D ED
Sbjct: 184 VLDQINGDSF----DDED 197


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