BLASTX nr result

ID: Coptis23_contig00004571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004571
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262...   343   8e-92
emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]   343   8e-92
emb|CBI40412.3| unnamed protein product [Vitis vinifera]              341   3e-91
ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitoch...   338   2e-90
gb|ACU19535.1| unknown [Glycine max]                                  337   6e-90

>ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262014 [Vitis vinifera]
          Length = 977

 Score =  343 bits (879), Expect = 8e-92
 Identities = 168/239 (70%), Positives = 186/239 (77%)
 Frame = +1

Query: 379  KMRSRFAFLSHSLKRRTGRVVGLXXXXXXXXDKIVASVLFERLPVVIPKIDPAVYAFQEF 558
            KMR  F  L+ SL    G             +KIVASVLFERLPVVIPKIDP VYAFQEF
Sbjct: 745  KMRRTFTSLARSLPPARGFCTSTS-------EKIVASVLFERLPVVIPKIDPVVYAFQEF 797

Query: 559  SYRWTQQYRRKYPDEVLGKSDARGKGDYHIDYVPAPRVTEADKNNDRRSXXXXXXXXXXX 738
            S+RW QQYRRKYPDE+  +S+ RGKGDY IDYVPAPRVTEAD+NNDRRS           
Sbjct: 798  SFRWRQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYL 857

Query: 739  XXYGATYGCPGGNPVWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVI 918
              +G TYG P G PVWHFPEKVY +EETLRKCAESAL+SV+GDLSHTYFVGNAP  HMVI
Sbjct: 858  LLFGTTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVI 917

Query: 919  QPTDDMPDTPSFKRFFFKSQVIATNKFRIGKSEDHVWVTKDELTEYFPEQAAFLDKMII 1095
            QPT+++PD PSFKRFFFKSQVIATNK+ +GK +DHVWVTKDEL EYFPEQA FL+KMII
Sbjct: 918  QPTENVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 976


>emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]
          Length = 253

 Score =  343 bits (879), Expect = 8e-92
 Identities = 168/239 (70%), Positives = 186/239 (77%)
 Frame = +1

Query: 379  KMRSRFAFLSHSLKRRTGRVVGLXXXXXXXXDKIVASVLFERLPVVIPKIDPAVYAFQEF 558
            KMR  F  L+ SL    G             +KIVASVLFERLPVVIPKIDP VYAFQEF
Sbjct: 21   KMRRTFTSLARSLPPARGFCTSTS-------EKIVASVLFERLPVVIPKIDPVVYAFQEF 73

Query: 559  SYRWTQQYRRKYPDEVLGKSDARGKGDYHIDYVPAPRVTEADKNNDRRSXXXXXXXXXXX 738
            S+RW QQYRRKYPDE+  +S+ RGKGDY IDYVPAPRVTEAD+NNDRRS           
Sbjct: 74   SFRWRQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYL 133

Query: 739  XXYGATYGCPGGNPVWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVI 918
              +G TYG P G PVWHFPEKVY +EETLRKCAESAL+SV+GDLSHTYFVGNAP  HMVI
Sbjct: 134  LLFGTTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVI 193

Query: 919  QPTDDMPDTPSFKRFFFKSQVIATNKFRIGKSEDHVWVTKDELTEYFPEQAAFLDKMII 1095
            QPT+++PD PSFKRFFFKSQVIATNK+ +GK +DHVWVTKDEL EYFPEQA FL+KMII
Sbjct: 194  QPTENVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 252


>emb|CBI40412.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  341 bits (874), Expect = 3e-91
 Identities = 167/238 (70%), Positives = 185/238 (77%)
 Frame = +1

Query: 382  MRSRFAFLSHSLKRRTGRVVGLXXXXXXXXDKIVASVLFERLPVVIPKIDPAVYAFQEFS 561
            MR  F  L+ SL    G             +KIVASVLFERLPVVIPKIDP VYAFQEFS
Sbjct: 1    MRRTFTSLARSLPPARGFCTSTS-------EKIVASVLFERLPVVIPKIDPVVYAFQEFS 53

Query: 562  YRWTQQYRRKYPDEVLGKSDARGKGDYHIDYVPAPRVTEADKNNDRRSXXXXXXXXXXXX 741
            +RW QQYRRKYPDE+  +S+ RGKGDY IDYVPAPRVTEAD+NNDRRS            
Sbjct: 54   FRWRQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYLL 113

Query: 742  XYGATYGCPGGNPVWHFPEKVYETEETLRKCAESALKSVLGDLSHTYFVGNAPMGHMVIQ 921
             +G TYG P G PVWHFPEKVY +EETLRKCAESAL+SV+GDLSHTYFVGNAP  HMVIQ
Sbjct: 114  LFGTTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVIQ 173

Query: 922  PTDDMPDTPSFKRFFFKSQVIATNKFRIGKSEDHVWVTKDELTEYFPEQAAFLDKMII 1095
            PT+++PD PSFKRFFFKSQVIATNK+ +GK +DHVWVTKDEL EYFPEQA FL+KMII
Sbjct: 174  PTENVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 231


>ref|XP_003546166.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
            max]
          Length = 230

 Score =  338 bits (867), Expect = 2e-90
 Identities = 162/209 (77%), Positives = 175/209 (83%)
 Frame = +1

Query: 472  DKIVASVLFERLPVVIPKIDPAVYAFQEFSYRWTQQYRRKYPDEVLGKSDARGKGDYHID 651
            + +VASVLFERLPVVIPKIDP VYAFQEFS+RW QQY+R+YPDE L KSDARGKGDY ID
Sbjct: 22   ENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRYPDEFLDKSDARGKGDYQID 81

Query: 652  YVPAPRVTEADKNNDRRSXXXXXXXXXXXXXYGATYGCPGGNPVWHFPEKVYETEETLRK 831
            YVPAPRVTEADKNNDRRS             YG  YG P G PVWHFPEKVYE+E+T+RK
Sbjct: 82   YVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAPSGKPVWHFPEKVYESEDTMRK 141

Query: 832  CAESALKSVLGDLSHTYFVGNAPMGHMVIQPTDDMPDTPSFKRFFFKSQVIATNKFRIGK 1011
            CAESALKSVLGDLS+TYFVGNAPM HMV+QPT+D   + SFKRFFFKSQVIA NKF IGK
Sbjct: 142  CAESALKSVLGDLSNTYFVGNAPMAHMVVQPTEDQSRSTSFKRFFFKSQVIAKNKFNIGK 201

Query: 1012 SEDHVWVTKDELTEYFPEQAAFLDKMIIS 1098
             EDHVWVTKDEL EYFPEQA FL+KMIIS
Sbjct: 202  CEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


>gb|ACU19535.1| unknown [Glycine max]
          Length = 230

 Score =  337 bits (863), Expect = 6e-90
 Identities = 161/209 (77%), Positives = 174/209 (83%)
 Frame = +1

Query: 472  DKIVASVLFERLPVVIPKIDPAVYAFQEFSYRWTQQYRRKYPDEVLGKSDARGKGDYHID 651
            + +VASVLFERLPVVIPKIDP VYAFQEFS+RW QQY+R+YPDE L KSDARGKGDY ID
Sbjct: 22   ENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRYPDEFLDKSDARGKGDYQID 81

Query: 652  YVPAPRVTEADKNNDRRSXXXXXXXXXXXXXYGATYGCPGGNPVWHFPEKVYETEETLRK 831
            YVPAPRVTEADKNNDRRS             YG  YG P G PVWHFPEKVYE+E+T+RK
Sbjct: 82   YVPAPRVTEADKNNDRRSLQRALDRRLYLLLYGNAYGAPSGKPVWHFPEKVYESEDTMRK 141

Query: 832  CAESALKSVLGDLSHTYFVGNAPMGHMVIQPTDDMPDTPSFKRFFFKSQVIATNKFRIGK 1011
            CAESALKSVLGDLS+TYFVGN PM HMV+QPT+D   + SFKRFFFKSQVIA NKF IGK
Sbjct: 142  CAESALKSVLGDLSNTYFVGNTPMAHMVVQPTEDQSRSTSFKRFFFKSQVIAKNKFNIGK 201

Query: 1012 SEDHVWVTKDELTEYFPEQAAFLDKMIIS 1098
             EDHVWVTKDEL EYFPEQA FL+KMIIS
Sbjct: 202  CEDHVWVTKDELMEYFPEQAEFLNKMIIS 230


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