BLASTX nr result

ID: Coptis23_contig00004568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004568
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...   531   e-148
ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [C...   521   e-145
ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [G...   511   e-142
gb|AFK48771.1| unknown [Lotus japonicus]                              510   e-142
ref|XP_002516421.1| conserved hypothetical protein [Ricinus comm...   509   e-142

>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
            gi|297736110|emb|CBI24148.3| unnamed protein product
            [Vitis vinifera]
          Length = 349

 Score =  531 bits (1369), Expect = e-148
 Identities = 254/330 (76%), Positives = 280/330 (84%)
 Frame = +2

Query: 59   PRRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVE 238
            PRRNSKRPKYS+FTQQELPACKPILTP+WVIS FMLV  +FIPIGV +L ASRDVVEIV+
Sbjct: 21   PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPIGVAALFASRDVVEIVD 80

Query: 239  RYDNKCIPGNWTGSNVQFIQSAENKACTRQLTVKKHMKQPIYVYYELDDFYQNHRRYVKS 418
            RY+  CIP  +    V +IQ   NK C R LTV K MKQPIYVYY+LD+FYQNHRRYVKS
Sbjct: 81   RYETDCIPEEFRNDKVNYIQKPGNKPCNRTLTVPKKMKQPIYVYYQLDNFYQNHRRYVKS 140

Query: 419  RNDAQLNNRKDENTTDGCDPEDKLSNGLTIVPCGLIAWSLFNDTYNFSRNNQQIKVNKKD 598
            RND QL +    N T  C PED  +NG  IVPCGLIAWSLFNDTYNFSRNN+Q+ +NKK 
Sbjct: 141  RNDEQLRSGNSANETSDCKPED-YANGAVIVPCGLIAWSLFNDTYNFSRNNEQLSLNKKG 199

Query: 599  ISWKSDRESKFGKNVFPKNFQNGTLRGGAKLNVSVPLSQQEDLIVWMRTAALPNFRKLYG 778
            ISWKSDRE KFGK+V+PKNFQNGTL GGA LN S+PLS+QEDLIVWMRTAALP FRKLYG
Sbjct: 200  ISWKSDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLIVWMRTAALPTFRKLYG 259

Query: 779  KIEVDLQANEQIIVTLDNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGMCFTL 958
            KIEVDLQ N+ I V+L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+C  L
Sbjct: 260  KIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICIFL 319

Query: 959  AMAFAIVYLVKPRKLGDPSYLSWNRNPSGH 1048
            AMAF +VYLVKPR+LGDPSYLSWNRNP GH
Sbjct: 320  AMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349


>ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]
            gi|449475853|ref|XP_004154570.1| PREDICTED:
            ALA-interacting subunit 3-like [Cucumis sativus]
          Length = 343

 Score =  521 bits (1342), Expect = e-145
 Identities = 248/329 (75%), Positives = 276/329 (83%)
 Frame = +2

Query: 62   RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVER 241
            RRNSKRPKYS+FTQQELPACKPILTP+WVIS FMLVS +F+PIGV SL ASRDVVEI++R
Sbjct: 16   RRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDR 75

Query: 242  YDNKCIPGNWTGSNVQFIQSAENKACTRQLTVKKHMKQPIYVYYELDDFYQNHRRYVKSR 421
            Y+ +CIP  +    V FIQ   NK C R +TV K MKQPIYVYY+LD+FYQNHRRYV+SR
Sbjct: 76   YETECIPERFRSDKVGFIQGTANKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYVQSR 135

Query: 422  NDAQLNNRKDENTTDGCDPEDKLSNGLTIVPCGLIAWSLFNDTYNFSRNNQQIKVNKKDI 601
            +D QL +   E  T  C PED   NG  +VPCGLIAWSLFNDTYNF+ N +Q+ +NK  I
Sbjct: 136  SDKQLRDPGSERDTSSCKPEDNW-NGQPVVPCGLIAWSLFNDTYNFTLNKKQVAINKVGI 194

Query: 602  SWKSDRESKFGKNVFPKNFQNGTLRGGAKLNVSVPLSQQEDLIVWMRTAALPNFRKLYGK 781
            SWKSDRE KFGKNVFPKNFQ G + GG KLN SVPLSQQEDLIVWMRTAALP FRKLYGK
Sbjct: 195  SWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKLYGK 254

Query: 782  IEVDLQANEQIIVTLDNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGMCFTLA 961
            IEVDL+ N+ I V L+NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 255  IEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 314

Query: 962  MAFAIVYLVKPRKLGDPSYLSWNRNPSGH 1048
            MAF +VYLVKPR+LGDPSYLSWNRNPSGH
Sbjct: 315  MAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343


>ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]
          Length = 344

 Score =  511 bits (1317), Expect = e-142
 Identities = 247/329 (75%), Positives = 281/329 (85%)
 Frame = +2

Query: 62   RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVER 241
            RRN+KRPKYSKFTQQELPACKPILTP+ VIS F+LVS VF+PIGV SL+ASR VVEIV R
Sbjct: 18   RRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVFVPIGVASLIASRKVVEIVFR 77

Query: 242  YDNKCIPGNWTGSNVQFIQSAENKACTRQLTVKKHMKQPIYVYYELDDFYQNHRRYVKSR 421
            Y++ CIP   T   V +IQS  +K C   L V KHMK PIYVYY+LD+FYQNHRRYVKSR
Sbjct: 78   YESTCIPHEVT-DKVAYIQSPADKTCKISLPVDKHMKSPIYVYYQLDNFYQNHRRYVKSR 136

Query: 422  NDAQLNNRKDENTTDGCDPEDKLSNGLTIVPCGLIAWSLFNDTYNFSRNNQQIKVNKKDI 601
            +D QL +R++EN+T  C+PED ++NG  IVPCGLIAWSLFNDTY+FSR+N+ + VNK  I
Sbjct: 137  SDEQLRDRREENSTSACNPED-IANGKAIVPCGLIAWSLFNDTYSFSRDNKNLTVNKNGI 195

Query: 602  SWKSDRESKFGKNVFPKNFQNGTLRGGAKLNVSVPLSQQEDLIVWMRTAALPNFRKLYGK 781
            SWKSDRE KFGK+VFPKNFQ+  +RGGA LN S+PLS+QEDLIVWMRTAALP FRKLYGK
Sbjct: 196  SWKSDREHKFGKDVFPKNFQSSAIRGGASLNESIPLSKQEDLIVWMRTAALPTFRKLYGK 255

Query: 782  IEVDLQANEQIIVTLDNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGMCFTLA 961
            IEVDL A +QI VTL NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+CF LA
Sbjct: 256  IEVDLNAGDQINVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLA 315

Query: 962  MAFAIVYLVKPRKLGDPSYLSWNRNPSGH 1048
            +AF +VY VKPR+LGDPSYLSWNRNP GH
Sbjct: 316  LAFTVVYFVKPRQLGDPSYLSWNRNPGGH 344


>gb|AFK48771.1| unknown [Lotus japonicus]
          Length = 343

 Score =  510 bits (1314), Expect = e-142
 Identities = 240/329 (72%), Positives = 279/329 (84%)
 Frame = +2

Query: 62   RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVER 241
            RR +KRPKYSKFTQQELPACKPILTP+ VIS F++V+ VFIPIGV SL+ASRDVVEI+ R
Sbjct: 16   RRQTKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASRDVVEIIHR 75

Query: 242  YDNKCIPGNWTGSNVQFIQSAENKACTRQLTVKKHMKQPIYVYYELDDFYQNHRRYVKSR 421
            Y+  C+PGNW+   V +IQS+ +K CTR++ V+K MK PIYVYY+LD+FYQNHRRYVKSR
Sbjct: 76   YEADCVPGNWSSDEVGYIQSSADKTCTREIHVEKRMKSPIYVYYQLDNFYQNHRRYVKSR 135

Query: 422  NDAQLNNRKDENTTDGCDPEDKLSNGLTIVPCGLIAWSLFNDTYNFSRNNQQIKVNKKDI 601
            ND QL +    N+T GC PED + NG+ I+PCGLIAWS+FNDTY+FSRNN  + VNKK I
Sbjct: 136  NDEQLRDSSKANSTSGCKPEDYV-NGVPILPCGLIAWSMFNDTYSFSRNNNNLTVNKKGI 194

Query: 602  SWKSDRESKFGKNVFPKNFQNGTLRGGAKLNVSVPLSQQEDLIVWMRTAALPNFRKLYGK 781
            SWKSDRE KFG +VFPKNFQNGT+ GGA LN ++PLS+QEDLIVWMRTAALP FRKLYGK
Sbjct: 195  SWKSDREHKFGDDVFPKNFQNGTIIGGAHLNETIPLSEQEDLIVWMRTAALPTFRKLYGK 254

Query: 782  IEVDLQANEQIIVTLDNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGMCFTLA 961
            IE+DL+  + I V L NNYNTYSF+GKKKLVLSTTSWLGGKNDFLGIAYLTVGG+ F L+
Sbjct: 255  IEMDLEKGDVIKVVLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLSFFLS 314

Query: 962  MAFAIVYLVKPRKLGDPSYLSWNRNPSGH 1048
            M F IVY V+PR+LGDPSYLSWNRNP GH
Sbjct: 315  MVFTIVYFVEPRQLGDPSYLSWNRNPGGH 343


>ref|XP_002516421.1| conserved hypothetical protein [Ricinus communis]
            gi|223544456|gb|EEF45976.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 350

 Score =  509 bits (1310), Expect = e-142
 Identities = 242/330 (73%), Positives = 279/330 (84%), Gaps = 1/330 (0%)
 Frame = +2

Query: 59   PRRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVE 238
            PRRNSKRPKYS+FTQQELPACKPILTP+WVIS F+LVS VFIPIG+ SL AS+DVVEI++
Sbjct: 21   PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFILVSIVFIPIGIASLTASQDVVEIID 80

Query: 239  RYDNKCIPGNWTGSNVQFIQSAE-NKACTRQLTVKKHMKQPIYVYYELDDFYQNHRRYVK 415
            RY+ +CIP       V +IQS + +K C R + V K MKQPIYVYY+LD+FYQNHRRYVK
Sbjct: 81   RYETECIPAQNRTDKVGYIQSPDTDKRCNRTIRVTKRMKQPIYVYYQLDNFYQNHRRYVK 140

Query: 416  SRNDAQLNNRKDENTTDGCDPEDKLSNGLTIVPCGLIAWSLFNDTYNFSRNNQQIKVNKK 595
            SR+D QL +   EN T  C PED + NG+ IVPCGLIAWSLFNDTY+FS N+ +++VNKK
Sbjct: 141  SRSDEQLRSLSSENETSNCKPEDTV-NGIAIVPCGLIAWSLFNDTYSFSLNSMELQVNKK 199

Query: 596  DISWKSDRESKFGKNVFPKNFQNGTLRGGAKLNVSVPLSQQEDLIVWMRTAALPNFRKLY 775
            DISWKSDR+ KFGK+VFPKNFQ G LRGGA LN S PLS+QEDLIVWMRTAALP FRKLY
Sbjct: 200  DISWKSDRDHKFGKDVFPKNFQMGDLRGGATLNTSKPLSEQEDLIVWMRTAALPTFRKLY 259

Query: 776  GKIEVDLQANEQIIVTLDNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGMCFT 955
            GKIE DLQ N+++ +TL NNYNTYSF GKKKLVLSTT+WLGGKNDFLGIAYLTVGG+CF 
Sbjct: 260  GKIEQDLQPNDELHITLQNNYNTYSFDGKKKLVLSTTTWLGGKNDFLGIAYLTVGGICFF 319

Query: 956  LAMAFAIVYLVKPRKLGDPSYLSWNRNPSG 1045
            LAM+F +VYL+KPR+LGDPSYLSWNR P G
Sbjct: 320  LAMSFTVVYLIKPRRLGDPSYLSWNRTPGG 349


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