BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004566
         (2866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         953   0.0  
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           934   0.0  
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   880   0.0  
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   859   0.0  
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    851   0.0  

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  953 bits (2464), Expect = 0.0
 Identities = 488/958 (50%), Positives = 644/958 (67%), Gaps = 4/958 (0%)
 Frame = -3

Query: 2864 LLNEETRRXXXXXXXXS-EVLFTEKRGRGRNXXXXXXXXXXXXXXXGEARTPKAERQCYY 2688
            +LNEE RR          ++L T+ RGR +                 ++R+   + +C+Y
Sbjct: 179  ILNEEARRRSQDTSTSQSDILVTDDRGRNKQKGQRGRDKSRS-----KSRSRYKDIECHY 233

Query: 2687 CATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTGRDTTALVDDLVGIVSDCGVCCLSTS 2508
            C  K H +      KR++K +        ++G+TG     +  DL+ +  D  V  ++ +
Sbjct: 234  CGKKSHIKKYSFKWKREKKQD-------NKDGDTGNQVATVRADLL-VACDDNV--INVA 283

Query: 2507 CQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHIETNVGYTL 2328
            C +T W++D+GA+YHVTP + FFT+Y+ G++GE+RMGN G  K+ G G V +ET+ G  L
Sbjct: 284  CHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKL 343

Query: 2327 TLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQASL 2148
             LK+V+H PDIRL+LIS GKLDDDGF   FG+G WK+++GS+V ARG K+ +LY  Q+S+
Sbjct: 344  VLKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSV 403

Query: 2147 CKXXXXXXXXXXXXELWHKRLCHMGIKGMEVLAKQKALPDIKGTHLNTCTHCLVGKQHRV 1968
                          ELWHKRL HM +KG++ LAK+  L  +K   L+ C HCL GKQ RV
Sbjct: 404  SDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRRV 463

Query: 1967 SFQRFPSHRKDTVLELVHTDLCGPMRVKSHQGALYFLTFIDDASRKIWAYSLKTKDEVLG 1788
            SF   P  RK   L+L+H+D+CGPM+V+S  GA YF+TFIDD SRK+W Y+LK K +VLG
Sbjct: 464  SFMSHPPTRKSEPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLG 523

Query: 1787 VFEKFHSMVERETGKLLKCIRSDNGGEYIGPFEEYCQSHGIRHEQTVPKTPQQNGIAERM 1608
            VF++FH++VER+TGK LKCIR+DNGGEY GPF+EYC+ +GIRH++T PK PQ NG+AERM
Sbjct: 524  VFKEFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERM 583

Query: 1607 NRTIVERMRCMLSHSKLPRSYWVEAMRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1428
            NRTI+ER+RCML  +KLP S+W EA+ TA                               
Sbjct: 584  NRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPVIALKNEVPDKVWCGK------- 636

Query: 1427 XXXXXXXXXXDVDYGYLRVFGCRAFVHIPKDERSKLDDKAKQCIFLGYGDEKFGYKLYDP 1248
                      DV Y +LRVFGC+AFVH+P+DERSKLD K +QCIF+GYG ++FGY+LYDP
Sbjct: 637  ----------DVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDP 686

Query: 1247 INKKVIRSRDVVFLEDQTIADFEEGEKLQAF-TNDLVDSEPEVP--TVERAEGIENAENH 1077
            + KK++RSRDVVF E+QTI D ++ ++ ++  +  LVD EP     T +  E  EN +N 
Sbjct: 687  VEKKLVRSRDVVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQENVQNG 746

Query: 1076 EFEAHDENPIAHDGIEPIGIEDADEMHEPPPEQAEVHPPEAPADGARRSDRERLASTRYP 897
            +       P+     + +   D D   +    Q +  P + P D  RRSDRER  STRY 
Sbjct: 747  D-------PVPDYQGDTV---DVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYS 796

Query: 896  PHTYVLLSDGGEPMYYQEALEGTDKEKWLKAMHDEMDSLHKNHTYELVEKPTGRKVLKNK 717
            P  YVLL+DGGEP  Y+EA+E   K +W +AM +EM+SL+ N T+ELV+ P  RK LKN+
Sbjct: 797  PSQYVLLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNR 856

Query: 716  WIYKVKHEENNPHPRHKARLVVKGFGQRKGIDFDEIFSPVVKMTSIRVVLGMTASMNLEV 537
            W+Y+VKHEE    PR KARLVVKGF Q+KGIDFDEIFSPVVK +SIRVVLG+ A +++E+
Sbjct: 857  WVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEI 916

Query: 536  EQLDVKTAFLHGDLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFM 357
            EQ+DVKTAFLHGDL+E++YM+QPEGF+VKGKE  VC+L KSLYGLKQAPRQWY KF S M
Sbjct: 917  EQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVM 976

Query: 356  AKQGYKKSASDHCVFVQRFPDGDFIVLLLYVDDMLIVGPXXXXXXXXXXXXXKSFEMKDL 177
            +K GYKK++SDHCVFV R+ D DF++LLLYVDDMLIVG              KSF MKD+
Sbjct: 977  SKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQELSKSFSMKDM 1036

Query: 176  GQAKQILGMRITRDRKSGKLWLSQESYIEKVLKRFNMDQAKPVSCPLGGQFRMTKEMC 3
            G AKQILGM+I RDR++ KLWLSQE YIEKVL+RF+M++AKPVS PL   F++ K+ C
Sbjct: 1037 GPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAKPVSTPLDMHFKLCKKQC 1094


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  934 bits (2415), Expect = 0.0
 Identities = 492/955 (51%), Positives = 632/955 (66%), Gaps = 5/955 (0%)
 Frame = -3

Query: 2864 LLNEETRRXXXXXXXXS-EVLFTEKRGRGRNXXXXXXXXXXXXXXXGEARTPKAERQCYY 2688
            +LNEE RR          EVL    RGR +N                      A  +C+Y
Sbjct: 179  ILNEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQSNRDKSRGKSNKF------ANVECHY 232

Query: 2687 CATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTGRDTTALVDDLVGIVSDCGVCCLSTS 2508
            C  KGH +  CR  + D+K N      V+   ++  +T +  +    +V D  +  L+T 
Sbjct: 233  CKKKGHIKRFCRQFQNDQKKN--KGKKVKPEESSDDETNSFGE--FNVVYDDDIINLTT- 287

Query: 2507 CQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHIETNVGYTL 2328
             Q+  WVID+GA+ H TP R  F++Y+ G++G V+MGN+  S ++G GDV +ET  G  L
Sbjct: 288  -QEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMNGMKL 346

Query: 2327 TLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQASL 2148
             L+DVRHVPD+RL+LIS  KLD++G+ N+F NG WKL++GS++ ARG K   LY TQAS+
Sbjct: 347  LLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVTQASI 406

Query: 2147 CKXXXXXXXXXXXXELWHKRLCHMGIKGMEVLAKQKALPDIKGTHLNTCTHCLVGKQHRV 1968
             +            +LWH+RL HM  K M  L K+ ALP +    L  C  CL GKQ+RV
Sbjct: 407  SQQVINVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPGLNQIQLKKCADCLAGKQNRV 466

Query: 1967 SFQRFPSHRKDTVLELVHTDLCGPMRVKSHQGALYFLTFIDDASRKIWAYSLKTKDEVLG 1788
            SF+RFP  R+  VL+LVH+D+CGP + KS  GA YF+TFIDD SRK W Y+LKTKD+V  
Sbjct: 467  SFKRFPPSRRQNVLDLVHSDVCGPFK-KSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQ 525

Query: 1787 VFEKFHSMVERETGKLLKCIRSDNGGEYIGPFEEYCQSHGIRHEQTVPKTPQQNGIAERM 1608
            VF++F ++VERETGK LKCIR+DNGGEY G F+ YC+ HGIRH+ T PKTPQ NG+AERM
Sbjct: 526  VFKQFLTLVERETGKKLKCIRTDNGGEYQGQFDAYCKEHGIRHQFTPPKTPQLNGLAERM 585

Query: 1607 NRTIVERMRCMLSHSKLPRSYWVEAMRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1428
            NRT++ER RC+LSHSKLP+++W EA+ TA                               
Sbjct: 586  NRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGR------- 638

Query: 1427 XXXXXXXXXXDVDYGYLRVFGCRAFVHIPKDERSKLDDKAKQCIFLGYGDEKFGYKLYDP 1248
                      D+ Y  LRVFGC+A+VH+PKDERSKLD K ++C+F+GYG +  GYK YDP
Sbjct: 639  ----------DISYDQLRVFGCKAYVHVPKDERSKLDVKTRECVFIGYGQDMLGYKFYDP 688

Query: 1247 INKKVIRSRDVVFLEDQTIADFEEGEKLQAFTNDLVDSEPEVPTVERAEGIENAENHEFE 1068
            + KK++RSRDVVF+EDQTI D ++ EK    T+D  + E     V R  G ++ ++++ E
Sbjct: 689  VEKKLVRSRDVVFVEDQTIEDIDKVEKS---TDDSAEFELPPTVVPRQVG-DDVQDNQPE 744

Query: 1067 AH---DENPIAH-DGIEPIGIEDADEMHEPPPEQAEVHPPEAPADGARRSDRERLASTRY 900
            A    +E+ +A  +G E  G +DADE  +P P      P         RS R    STRY
Sbjct: 745  APGLPNEDELADTEGNEDNGDDDADEEDQPQPPILNNPPYHT------RSGRVVQQSTRY 798

Query: 899  PPHTYVLLSDGGEPMYYQEALEGTDKEKWLKAMHDEMDSLHKNHTYELVEKPTGRKVLKN 720
             PH YVLL+DGGEP  ++EA++   KEKW++AM DE+ SLH+N T+ELV+ P G++ LKN
Sbjct: 799  SPHEYVLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKN 858

Query: 719  KWIYKVKHEENNPHPRHKARLVVKGFGQRKGIDFDEIFSPVVKMTSIRVVLGMTASMNLE 540
            KW++K+KH+E+N  PR KARLVVKGF QRKGIDFDEIFSPVVKMTSIR VLG+ AS+NLE
Sbjct: 859  KWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLE 918

Query: 539  VEQLDVKTAFLHGDLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSF 360
            VEQ+DVKTAFLHGDLEE++YM+QP+GF+ KGKE  VC+L KSLYGLKQAPRQWY KF+S 
Sbjct: 919  VEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESV 978

Query: 359  MAKQGYKKSASDHCVFVQRFPDGDFIVLLLYVDDMLIVGPXXXXXXXXXXXXXKSFEMKD 180
            M + GYKK+ SDHCVF Q+F D DFI+LLLYVDDMLIVG              K F MKD
Sbjct: 979  MGQHGYKKTTSDHCVFAQKFSDDDFIILLLYVDDMLIVGRNVSRINSLKEQLSKFFAMKD 1038

Query: 179  LGQAKQILGMRITRDRKSGKLWLSQESYIEKVLKRFNMDQAKPVSCPLGGQFRMT 15
            LG AKQILGMRI RDR++ KLWLSQE YIEKVL+RFNM++ K VSCPL   FR++
Sbjct: 1039 LGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLS 1093


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  880 bits (2274), Expect = 0.0
 Identities = 470/961 (48%), Positives = 619/961 (64%), Gaps = 7/961 (0%)
 Frame = -3

Query: 2864 LLNEETRRXXXXXXXXSEVLFTEKRGRGRNXXXXXXXXXXXXXXXGEARTPKAERQCYYC 2685
            LLNE+ R+         + L TE RGR                     R+    R CY C
Sbjct: 180  LLNEKMRKKPENQG---QALITEGRGRSYQRSSNNYGRSGARGKSKN-RSKSRVRNCYNC 235

Query: 2684 ATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTGRDTTALV----DDLVGIVSDCGVCCL 2517
               GHF+ +C   ++ +          + +G    D TA +    D++V  +++   C +
Sbjct: 236  NQPGHFKRDCPNPRKGKG---------ETSGQKNDDNTAAMVQNNDNVVLFINEEEEC-M 285

Query: 2516 STSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHIETNVG 2337
              S  ++EWV+DT AS+H TP R  F  Y  G++G V+MGN+  SKI GIGD+ I+TNVG
Sbjct: 286  HLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVG 345

Query: 2336 YTLTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQ 2157
             TL LKDVRHVPD+R++LIS   LD DG+ + F N  W+L++GS+V A+G    +LY+T 
Sbjct: 346  CTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTN 405

Query: 2156 ASLCKXXXXXXXXXXXXELWHKRLCHMGIKGMEVLAKQKALPDIKGTHLNTCTHCLVGKQ 1977
            A +C+            +LWHKR+ HM  KG+++LAK+  +   KGT +  C +CL GKQ
Sbjct: 406  AEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQ 465

Query: 1976 HRVSFQRFPSHRKDTVLELVHTDLCGPMRVKSHQGALYFLTFIDDASRKIWAYSLKTKDE 1797
            HRVSFQ   S RK  +L+LV++D+CGPM ++S  G  YF+TFIDDASRK+W Y LKTKD+
Sbjct: 466  HRVSFQT-SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQ 524

Query: 1796 VLGVFEKFHSMVERETGKLLKCIRSDNGGEYIG-PFEEYCQSHGIRHEQTVPKTPQQNGI 1620
            V  VF+KFH++VERETG+ LK +RSDNGGEY    FEEYC SHGIRHE+TVP TPQ NG+
Sbjct: 525  VFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGV 584

Query: 1619 AERMNRTIVERMRCMLSHSKLPRSYWVEAMRTAXXXXXXXXXXXXXXXXXXXXXXXXXXX 1440
            AERMNRTIVE++R ML  +KLP+S+W EA++TA                           
Sbjct: 585  AERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNK--- 641

Query: 1439 XXXXXXXXXXXXXXDVDYGYLRVFGCRAFVHIPKDERSKLDDKAKQCIFLGYGDEKFGYK 1260
                          +V Y +L+VFGCRAF H+PK++R+KLDDK+  CIF+GYGDE+FGY+
Sbjct: 642  --------------EVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYR 687

Query: 1259 LYDPINKKVIRSRDVVFLEDQTIADFEEGEKLQAFTNDLVDSEPEVPTVERAEGIENAEN 1080
            L+DP+ KKVIRSRDVVF E +     +  EK++   N ++ +   +P+         +  
Sbjct: 688  LWDPVKKKVIRSRDVVFRESEVRTAADMSEKVK---NGIIPNFVTIPSTSNNPTSAESTT 744

Query: 1079 HEFEAHDENP--IAHDGIEPIGIEDADEMHEPPPEQAEVHPPEAPADGARRSDRERLAST 906
             E     E P  +   G +   +++  E  E P +  E H P       RRS+R R+ S 
Sbjct: 745  DEVSEQGEQPGEVIEQGEQ---LDEGVEEVEHPTQGEEQHQP------LRRSERPRVESR 795

Query: 905  RYPPHTYVLLSDGGEPMYYQEALEGTDKEKWLKAMHDEMDSLHKNHTYELVEKPTGRKVL 726
            RYP   YVL+SD  EP   +E L   +K + +KAM +EM+SL KN TY+LVE P G++ L
Sbjct: 796  RYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPL 855

Query: 725  KNKWIYKVKHEENNPHPRHKARLVVKGFGQRKGIDFDEIFSPVVKMTSIRVVLGMTASMN 546
            K KW++K+K + +    R+KARLVVKGF Q+KGIDFDEIFSPVVKMTSIR +L + AS++
Sbjct: 856  KCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLD 915

Query: 545  LEVEQLDVKTAFLHGDLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFD 366
            LEVEQLDVKTAFLHGDLEE++YM+QPEGFEV GK+H+VCKL KSLYGLKQAPRQWY+KFD
Sbjct: 916  LEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFD 975

Query: 365  SFMAKQGYKKSASDHCVFVQRFPDGDFIVLLLYVDDMLIVGPXXXXXXXXXXXXXKSFEM 186
            SFM  Q Y K+ SD CV+ +RF + +FI+LLLYVDDMLIVG              KSF+M
Sbjct: 976  SFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDM 1035

Query: 185  KDLGQAKQILGMRITRDRKSGKLWLSQESYIEKVLKRFNMDQAKPVSCPLGGQFRMTKEM 6
            KDLG A+QILGM+I R+R S KLWLSQE YIE+VL+RFNM  AKPVS PL G  +++K+M
Sbjct: 1036 KDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKM 1095

Query: 5    C 3
            C
Sbjct: 1096 C 1096


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  859 bits (2220), Expect = 0.0
 Identities = 460/966 (47%), Positives = 606/966 (62%), Gaps = 16/966 (1%)
 Frame = -3

Query: 2864 LLNEETRRXXXXXXXXSEVLFTEKRGRGRNXXXXXXXXXXXXXXXGEARTPK-AERQCYY 2688
            +LNEE RR        S VL   K GR ++                +++T K A  +C+Y
Sbjct: 157  VLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGPKNRDRS-------KSKTNKFANVECHY 209

Query: 2687 CATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTGRDTTALVDDLVGIVSDCGVCCLSTS 2508
            C  KGH +  CR LKRD K   V E      G   +  T + D L+   SD     ++ +
Sbjct: 210  CHLKGHIKKYCRQLKRDMKQGKVKEKKNDNGGEDDQVATTISDFLIVYDSDV----VNFA 265

Query: 2507 CQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHIETNVGYTL 2328
            CQ++ WVID GAS H TP + FFT+Y+ G++G VRMGN G +K IG+GDV +ET+ G  L
Sbjct: 266  CQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETSNGTML 325

Query: 2327 TLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQASL 2148
            TLK+V+H+PDIR++LIS GKLDD+GF N+F +  WKL+RGS+V A+G K+ SLY  QA +
Sbjct: 326  TLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQARV 385

Query: 2147 CKXXXXXXXXXXXXELWHKRLCHMGIKGMEVLAKQKALPDIKGTHLNTCTHCLVGKQHRV 1968
                          ELWH +L HM  KG+ +LAK+  L  +K   L  C HCL GKQ RV
Sbjct: 386  IDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKGSLKRCAHCLAGKQTRV 445

Query: 1967 SFQRFPSHRKDTVLELVHTDLCGPMRVKSHQGALYFLTFIDDASRKIWAYSLKTKDEVLG 1788
            +F+     RK  +L+LV++D+ GPM+ K+  G+LYF+TFIDD SRKIW Y+LKTKD+VL 
Sbjct: 446  AFKTLHHTRKPGMLDLVYSDVYGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLD 505

Query: 1787 VFEKFHSMVERETGKLLKCIRSDNGGEYIGPFEEYCQSHGIRHEQTVPKTPQQNGIAERM 1608
            VF++FH++VER++G+ LKCIR+DNGGEY GPF+EYC+ HG RH++T PKTPQ NG+AERM
Sbjct: 506  VFKQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGFRHQKTPPKTPQLNGLAERM 565

Query: 1607 NRTIVERMRCMLSHSKLPRSYWVEAMRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1428
            NRT+VER+RC+LS S+LPRS+W EA+ T                                
Sbjct: 566  NRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIWSNN------- 618

Query: 1427 XXXXXXXXXXDVDYGYLRVFGCRAFVHIPKDERSKLDDKAKQCIFLGYGDEKFGYKLYDP 1248
                      ++ Y +LRVFGC+AFVHIPKDERSKLD K + C+F+GYG ++ GYK YD 
Sbjct: 619  ----------EISYDHLRVFGCKAFVHIPKDERSKLDAKTRPCVFIGYGQDELGYKFYDL 668

Query: 1247 INKKVIRSRDVVFLEDQTIADFEEGEKLQA-FTNDLVDSEP----EVPT-VERAE----- 1101
            + KK+ RS DVVF+ED TI D E+   +++  + DL+D +P     +PT VE        
Sbjct: 669  VQKKLXRSXDVVFMEDHTIQDIEKTNPMESQHSGDLIDLDPAPLTNLPTQVEDGAHDDQH 728

Query: 1100 ---GIENAENHEFEAHDENPIAHDGIEPIGIEDADEMHEPPPEQAEVHPPEAPAD-GARR 933
                +E     E E HD+     D   P  +E  D++HE  P        EAP+D   RR
Sbjct: 729  DMGDVETPTQVEDETHDDQHDMGDVETPTQVEVDDDVHEQSPTA------EAPSDIPLRR 782

Query: 932  SDRERLASTRYPPHTYVLLSDGGEPMYYQEALEGTDKEKWLKAMHDEMDSLHKNHTYELV 753
            S R+R  STRY    YVLL+D GEP  Y EA++  +K KW+ AM DEM+SLH+NH++ELV
Sbjct: 783  STRDRHPSTRYSVDDYVLLTDEGEPESYVEAMKDENKMKWVDAMRDEMESLHENHSFELV 842

Query: 752  EKPTGRKVLKNKWIYKVKHEENNPHPRHKARLVVKGFGQRKGIDFDEIFSPVVKMTSIRV 573
            + P G++ LKN+W+Y+VK EE+   PR+KARLVVK    ++  D                
Sbjct: 843  KLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKRVQSKESFD---------------- 886

Query: 572  VLGMTASMNLEVEQLDVKTAFLHGDLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQA 393
                     LE++Q+DVKTAFLHGDL++++YM+QPEGF +KGKE  VCKL KSLYGLKQA
Sbjct: 887  ---------LEIQQMDVKTAFLHGDLDKEIYMEQPEGFVLKGKEDYVCKLKKSLYGLKQA 937

Query: 392  PRQWYIKFDSFMAKQGYKKSASDHCVFVQRFPDGDFIVLLLYVDDMLIVGPXXXXXXXXX 213
            PRQWY KF+S M +QGY+K+ SDHCVFVQ+F D DF++LLLYVDD+LIV           
Sbjct: 938  PRQWYKKFESVMGEQGYRKTTSDHCVFVQKFSDDDFVILLLYVDDILIVCRNVSRIDNLK 997

Query: 212  XXXXKSFEMKDLGQAKQILGMRITRDRKSGKLWLSQESYIEKVLKRFNMDQAKPVSCPLG 33
                KSF MKDLG  K+ILG+RI RDR S KL + QE YIEKV  RFNM + K VS PL 
Sbjct: 998  KQLSKSFAMKDLGPVKRILGIRIERDRASKKLCMLQEQYIEKVFARFNMSKFKVVSSPLA 1057

Query: 32   GQFRMT 15
              F+++
Sbjct: 1058 SHFKLS 1063


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  851 bits (2198), Expect = 0.0
 Identities = 459/960 (47%), Positives = 611/960 (63%), Gaps = 7/960 (0%)
 Frame = -3

Query: 2864 LLNEETRRXXXXXXXXSEVLFTEKRGRGRNXXXXXXXXXXXXXXXGEARTPKAERQCYYC 2685
            LLNE+ R+         +V  TE RGR                   + R+    R CY C
Sbjct: 181  LLNEKMRKKPENHG---QVFITESRGRSYQRSSSNYGRSGARGKS-KVRSKSKARNCYNC 236

Query: 2684 ATKGHFRYECRTLKRDEKNNCVHEDMVQRNGNTGRDTTALV---DDLVGIVSDCGVCCLS 2514
               GHF+ +C   KR +      E   Q+N +   +T A+V   DD+V ++++   C + 
Sbjct: 237  DQPGHFKRDCPNPKRGKG-----ESSGQKNDD---NTAAMVQNNDDVVLLINEEEEC-MH 287

Query: 2513 TSCQDTEWVIDTGASYHVTPHRGFFTTYSCGEYGEVRMGNSGVSKIIGIGDVHIETNVGY 2334
             +  ++EWV+DT ASYH TP R  F  Y  G+YG V+MGN+  SKI GIGD+  +TNVG 
Sbjct: 288  LAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGC 347

Query: 2333 TLTLKDVRHVPDIRLSLISAGKLDDDGFVNSFGNGVWKLSRGSIVAARGKKTCSLYKTQA 2154
            TL LKDVRHVPD+R++LIS   LD DG+ N F N  W+L++G++V A+G    +LY+T A
Sbjct: 348  TLVLKDVRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNA 407

Query: 2153 SLCKXXXXXXXXXXXXELWHKRLCHMGIKGMEVLAKQKALPDIKGTHLNTCTHCLVGKQH 1974
             +C+            +LWHKR+ H   KG+++L+K+  +   KGT +  C + L GKQH
Sbjct: 408  EICQGELNAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGTTIKPCNYWLFGKQH 467

Query: 1973 RVSFQRFPSHRKDTVLELVHTDLCGPMRVKSHQGALYFLTFIDDASRKIWAYSLKTKDEV 1794
            RVSFQ   S RK  +L+LV++D+CGPM ++S  G  YF+TFIDDASRK+W Y  + KD+V
Sbjct: 468  RVSFQT-SSERKSNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYIFRAKDQV 526

Query: 1793 LGVFEKFHSMVERETGKLLKCIRSDNGGEYIG-PFEEYCQSHGIRHEQTVPKTPQQNGIA 1617
              VF+KFH++VERETG+  K +R+DNGGEY    FEEYC +HGIRHE+TVP TPQ NG+A
Sbjct: 527  FQVFQKFHALVERETGRKRKRLRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVA 586

Query: 1616 ERMNRTIVERMRCMLSHSKLPRSYWVEAMRTAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1437
            ERMNRTIVE++R ML  +KLP+++W EA+RTA                            
Sbjct: 587  ERMNRTIVEKVRSMLRMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNK---- 642

Query: 1436 XXXXXXXXXXXXXDVDYGYLRVFGCRAFVHIPKDERSKLDDKAKQCIFLGYGDEKFGYKL 1257
                         ++ Y +L+VFGC+AF H+PK++R+KLDDK+  CIF+GYGDE+FGY+L
Sbjct: 643  -------------EMSYSHLKVFGCKAFAHVPKEQRTKLDDKSVPCIFIGYGDEEFGYRL 689

Query: 1256 YDPINKKVIRSRDVVFLEDQ--TIADFEEGEKLQAFTNDLVDSEPEVPTVERAEGIENAE 1083
            +D + KKVIRSRDV+F E +  T AD  E  K +   N ++ +   +P+         + 
Sbjct: 690  WDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKK---NGIIPNLVTIPS---------SS 737

Query: 1082 NHEFEAHDE-NPIAHDGIEPIGIEDADEMHEPPPEQAEVHPPEAPADGARRSDRERLAST 906
            NH   A    + +     +P  I +  E      EQ E +P E  +   RRS+R+R+ ST
Sbjct: 738  NHPTSAESTIDEVVEQEEQPDEIVEQGEQLGDNTEQME-YPEEEQSQPLRRSERQRVEST 796

Query: 905  RYPPHTYVLLSDGGEPMYYQEALEGTDKEKWLKAMHDEMDSLHKNHTYELVEKPTGRKVL 726
            +YP   YVL+   GEP   +E L   +K +W+KAMH+EM SL KN TY+LVE P G++ L
Sbjct: 797  KYPSSEYVLIKYEGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKNGTYQLVELPKGKRPL 856

Query: 725  KNKWIYKVKHEENNPHPRHKARLVVKGFGQRKGIDFDEIFSPVVKMTSIRVVLGMTASMN 546
            K KW++K+K + N    R+KARLVVKGF Q+KGIDFDEIFSPVVKMTSIR +L + AS++
Sbjct: 857  KCKWVFKLKKDGNGKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSIAASLD 916

Query: 545  LEVEQLDVKTAFLHGDLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFD 366
            LEVEQLDVKTAFLHGDLEE++YM+Q EGFEV GK+H+VCKL KSLYGLKQAPRQWY KFD
Sbjct: 917  LEVEQLDVKTAFLHGDLEEEIYMEQGEGFEVSGKKHMVCKLNKSLYGLKQAPRQWYKKFD 976

Query: 365  SFMAKQGYKKSASDHCVFVQRFPDGDFIVLLLYVDDMLIVGPXXXXXXXXXXXXXKSFEM 186
            SFM  Q Y+ + S  CV+ +RF D +FI+LLLY D MLIVG              KSF+M
Sbjct: 977  SFMKSQTYRNTYSHPCVYFKRFSDKNFIILLLYTDYMLIVGKDKELIAKLRKDFSKSFDM 1036

Query: 185  KDLGQAKQILGMRITRDRKSGKLWLSQESYIEKVLKRFNMDQAKPVSCPLGGQFRMTKEM 6
            KDLG AKQILGM+I R+ +  KL LS E YIE+VL+RFNM  AKP+S PL    ++TK+M
Sbjct: 1037 KDLGPAKQILGMKIAREEQK-KLGLSHEKYIERVLERFNMKSAKPISTPLVSYLKLTKQM 1095