BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004559
         (2660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   685   0.0  
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]      673   0.0  
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   654   0.0  
ref|XP_003520415.1| PREDICTED: uncharacterized protein LOC100779...   644   0.0  
ref|XP_003530116.1| PREDICTED: uncharacterized protein LOC100777...   637   e-180

>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  685 bits (1768), Expect = 0.0
 Identities = 356/524 (67%), Positives = 399/524 (76%), Gaps = 3/524 (0%)
 Frame = -2

Query: 2659 KEFEVFVGGLDKDASEDDLKKVFSVIGEVVEVRLMMNPLTKKNKGFAFLRFATVEQARRA 2480
            KEFEVFVGGLDKDA+EDDL+KVFS +GEV EVRLMMNP TKKNKGFAFLRFATVEQA+RA
Sbjct: 230  KEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRA 289

Query: 2479 VKDLRNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKQYGIDNVDDLTLVEDS 2300
            V +L+NPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLK YG++NV+DLTLVEDS
Sbjct: 290  VTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVEDS 349

Query: 2299 NNEGMNRGFAFLEFSSRSDAMDAYKRLQKRDIFFGVDRNAKVSFADSFIEPDDEIMAQVK 2120
            NNEGMNRGFAFLEFSSRSDAMDA+KRLQKRD+ FGVDR AKVSFADSFI+P DEIMAQVK
Sbjct: 350  NNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQVK 409

Query: 2119 TVFVDGLPASWDEDRVKEQLKKFGEVEKVELARNMPSAKRKDFGFVTFDTHDXXXXXXXX 1940
            TVF+DGLPASWDEDRV+E LKK+GE+EK+ELARNMPSAKRKDFGFVTFDTHD        
Sbjct: 410  TVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKS 469

Query: 1939 XXXXELGDGDNKVKVRARLSRPLQRGRGKYATHGDL-XXXXXXXXXXXXSWVRPAPHSFP 1763
                ELG+G+NK KVRARLSRPLQRG+GK+ + GD              SW RPA  SFP
Sbjct: 470  INNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPALRSFP 529

Query: 1762 GRGLRGVGGHLAPNHGRGFKGPFGFXXXXXXXXXXXXXXXXXXXXRSYSRK-PVPSYPRS 1586
            GRG RG+G  L P      K P GF                    RSY R+ PVP+YP+ 
Sbjct: 530  GRGARGLGPRLPP---AAVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPVPAYPKP 586

Query: 1585 SAKRDFVRRDEPPPRSRVAVDYGSRAAPERRTSYKVDYAPRGPSYPDDMXXXXXXXXXXX 1406
            + KRD+ RR+E P RSR AVDYGSR APERR SY+ DYA RG  Y D             
Sbjct: 587  NLKRDYGRREEVPLRSRPAVDYGSRVAPERRPSYRDDYATRGSGYSD-----IPRNTSRT 641

Query: 1405 XXXXAYVDEGYERRFER-LPPSYREGRSRDYDSISGSKRQYSALDDVPSRYAEAGVRQSR 1229
                 Y D+ Y +RFER  PPSYREGR RDYDSI+GSKR Y ALDDVP RYA+A VRQSR
Sbjct: 642  AARRTYEDDAYGQRFERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSR 701

Query: 1228 ARLDYGVGGSSTQYADTYSERLGRSQIGYAGSRSSLSAQESHGV 1097
            ARLDY +   ++QY D Y +RLGRS +GY GSRSS+S+Q+SHG+
Sbjct: 702  ARLDYEMSAGASQYGDAYGDRLGRSNLGYGGSRSSMSSQDSHGL 745


>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
          Length = 775

 Score =  673 bits (1736), Expect = 0.0
 Identities = 352/561 (62%), Positives = 399/561 (71%), Gaps = 3/561 (0%)
 Frame = -2

Query: 2659 KEFEVFVGGLDKDASEDDLKKVFSVIGEVVEVRLMMNPLTKKNKGFAFLRFATVEQARRA 2480
            KEFEVFVGGLDKD   DDL+KVFS +GEV EVRLMMNP TKKNKGFAFLRFATVEQAR+A
Sbjct: 195  KEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQARQA 254

Query: 2479 VKDLRNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKQYGIDNVDDLTLVEDS 2300
            V +L+NPV+NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLK YG+DNV+DLTLVEDS
Sbjct: 255  VTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVDNVEDLTLVEDS 314

Query: 2299 NNEGMNRGFAFLEFSSRSDAMDAYKRLQKRDIFFGVDRNAKVSFADSFIEPDDEIMAQVK 2120
            NNEGMNRGFAFLEFSSRSDAMDA+KRLQKRD+ FGVDR AKVSFADSFI+P DEIMAQVK
Sbjct: 315  NNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVK 374

Query: 2119 TVFVDGLPASWDEDRVKEQLKKFGEVEKVELARNMPSAKRKDFGFVTFDTHDXXXXXXXX 1940
            TVFVDGLPASWDEDRV+E LK +GE+ K+ELARNMPSAKRKDFGFVTFDTHD        
Sbjct: 375  TVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFDTHDAAVTCAKS 434

Query: 1939 XXXXELGDGDNKVKVRARLSRPLQRGRGKYATHGDLXXXXXXXXXXXXSWVRPAPHSFPG 1760
                ELG+GDNK KVRARLSRPLQRG+GK+A+ GD             SW  P+P S PG
Sbjct: 435  INNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGSWGLPSPRSLPG 494

Query: 1759 RGLRGVGGHLAPNHGRGFKGPFGF-XXXXXXXXXXXXXXXXXXXXRSYSRK-PVPSYPRS 1586
            R  RG+G  L P      K P                        RSY R+ PVPSYP+ 
Sbjct: 495  RSARGIGSRLPP---ASVKRPVPVRDRRPIMSMTARARPMPPPPPRSYDRRAPVPSYPKP 551

Query: 1585 SAKRDFVRRDE-PPPRSRVAVDYGSRAAPERRTSYKVDYAPRGPSYPDDMXXXXXXXXXX 1409
              KR++ RRDE PPPRSR  VDYGSR  P+RR  Y+ +Y  RG  YPD            
Sbjct: 552  GLKREYGRRDEVPPPRSRAPVDYGSRVVPDRR-PYRDEYTSRGSGYPD-----MPRSTSR 605

Query: 1408 XXXXXAYVDEGYERRFERLPPSYREGRSRDYDSISGSKRQYSALDDVPSRYAEAGVRQSR 1229
                  YVD+GY +RFER PPSYREGR+RDY+++SGSKR YS +DDVP RYA+ GVR SR
Sbjct: 606  GAARRPYVDDGYAQRFERPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSR 665

Query: 1228 ARLDYGVGGSSTQYADTYSERLGRSQIGYAGSRSSLSAQESHGVXXXXXXXXXXXXXXXX 1049
            ARLDY +GG + QY D Y +R+GRS +GY GSRSS+S+Q+SHG+                
Sbjct: 666  ARLDYDLGGGAPQYGDAYGDRMGRSNLGYGGSRSSISSQDSHGLYSSRQGMGYGGSYSGG 725

Query: 1048 XXXXXXXXXXXGDYVARGPDM 986
                        DY+ RG D+
Sbjct: 726  DVGGMYSSSYGSDYMPRGSDV 746


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  654 bits (1688), Expect = 0.0
 Identities = 350/562 (62%), Positives = 402/562 (71%), Gaps = 4/562 (0%)
 Frame = -2

Query: 2659 KEFEVFVGGLDKDASEDDLKKVFSVIGEVVEVRLMMNPLTKKNKGFAFLRFATVEQARRA 2480
            KEFEVFVGGLDKDA+EDDL+KVF+ +GEV EVRLMMNP TKKNKGFAFLRF+TVEQA++A
Sbjct: 211  KEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKKA 270

Query: 2479 VKDLRNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKQYGIDNVDDLTLVEDS 2300
            V +L+NPV+NGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLK YG++NV+D+TLVEDS
Sbjct: 271  VTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVEDS 330

Query: 2299 NNEGMNRGFAFLEFSSRSDAMDAYKRLQKRDIFFGVDRNAKVSFADSFIEPDDEIMAQVK 2120
            NNEGMNRGFAFLEFSSRSDAMDA+KRLQKRD+ FGVDR AKVSFADSFI+P DEIMAQVK
Sbjct: 331  NNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQVK 390

Query: 2119 TVFVDGLPASWDEDRVKEQLKKFGEVEKVELARNMPSAKRKDFGFVTFDTHDXXXXXXXX 1940
            TVFVDGLPASWDEDRV+E LKKFGE+EK+ELARNMPSAKRKDFGFVTFD+HD        
Sbjct: 391  TVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAKS 450

Query: 1939 XXXXELGDGDNKVKVRARLSRPLQRGRGKYATHGDLXXXXXXXXXXXXSWVRPAPHSFPG 1760
                ELG+GDNK KVRARLSRPLQRG+GK+A+  D              WVRP       
Sbjct: 451  INNAELGEGDNKAKVRARLSRPLQRGKGKHASRADF-RSWYGGRTARGPWVRP------- 502

Query: 1759 RGLRGVGGHLAPNHGRGFKGPFGFXXXXXXXXXXXXXXXXXXXXRSYSRK-PVPSYPRSS 1583
              +RG+    AP   +   G                        R+Y R+ P PSYP+SS
Sbjct: 503  --VRGIASRAAPTSVKRHVGL--RDRRPPVMSMPVRGRPLPPPNRTYDRRAPAPSYPKSS 558

Query: 1582 AKRDFVRRDE-PPPRSRVAVDYGSRAAPERRTSYKVDYAPRGPSYPDDMXXXXXXXXXXX 1406
             KRD+ RR+E PPPRSR  VDY SR+  ERR SY+ DY+ RG  Y D             
Sbjct: 559  LKRDYGRREELPPPRSRAPVDYSSRSVAERRQSYRDDYSSRGSGYSD-----IPRGTSRS 613

Query: 1405 XXXXAYVDEGYERRFERLPPSYREGRSRDYDSISGSKRQYSALDDVPSRYAE--AGVRQS 1232
                AYVD+GY +R ER PPSYREGR+RDYDSISGSKR YSA+DDVP RYA+  AG R S
Sbjct: 614  SARRAYVDDGYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHS 673

Query: 1231 RARLDYGVGGSSTQYADTYSERLGRSQIGYAGSRSSLSAQESHGVXXXXXXXXXXXXXXX 1052
            RARLDY +G S++QY D Y +R+GRS +GY GSRSSLS+Q+SHG+               
Sbjct: 674  RARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSLSSQDSHGLYTSRQGMGYGGSYGA 733

Query: 1051 XXXXXXXXXXXXGDYVARGPDM 986
                        GDY+ RG D+
Sbjct: 734  NDVGGMYQSSYGGDYMPRGSDV 755


>ref|XP_003520415.1| PREDICTED: uncharacterized protein LOC100779340 [Glycine max]
          Length = 816

 Score =  644 bits (1661), Expect = 0.0
 Identities = 334/531 (62%), Positives = 390/531 (73%), Gaps = 10/531 (1%)
 Frame = -2

Query: 2659 KEFEVFVGGLDKDASEDDLKKVFSVIGEVVEVRLMMNPLTKKNKGFAFLRFATVEQARRA 2480
            KEFEVFVGGLDKDA+E DL+K F  +G V EVRLMMNP TKKNKGFAFLRF TVEQA+RA
Sbjct: 230  KEFEVFVGGLDKDATESDLRKAFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRA 289

Query: 2479 VKDLRNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKQYGIDNVDDLTLVEDS 2300
            V +L+NPV+NGKQCGVTPSQDSDTL+LGNICKTWTKEALKEKLK YG+ NV+DLTLVED+
Sbjct: 290  VAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDT 349

Query: 2299 NNEGMNRGFAFLEFSSRSDAMDAYKRLQKRDIFFGVDRNAKVSFADSFIEPDDEIMAQVK 2120
            N+EG NRGFAFLEF SRS+AMDA+KRLQ+RD+ FGVD+ AKVSFADSFI+P DEIMAQVK
Sbjct: 350  NDEGKNRGFAFLEFPSRSEAMDAFKRLQRRDVVFGVDKPAKVSFADSFIDPGDEIMAQVK 409

Query: 2119 TVFVDGLPASWDEDRVKEQLKKFGEVEKVELARNMPSAKRKDFGFVTFDTHDXXXXXXXX 1940
            TVF+D LP SWDED V++ L+K+GE+EK+ELARNMP+A+RKD+GFVTF +HD        
Sbjct: 410  TVFIDALPPSWDEDYVRDLLRKYGEIEKIELARNMPAARRKDYGFVTFGSHDAAVKCADS 469

Query: 1939 XXXXELGDGDNKVKVRARLSRPLQRGRGKYATHGDLXXXXXXXXXXXXSWVRPAPHSFPG 1760
                ELG+GD K KVRARLSRPLQRGRGK+ + GD             SW RPAP SFP 
Sbjct: 470  ITGTELGEGDKKAKVRARLSRPLQRGRGKHISRGDYRSSRGSGMMTRPSWSRPAPRSFPS 529

Query: 1759 RGLRGVGGHLAPNHGRGFKGPFGFXXXXXXXXXXXXXXXXXXXXRSYSRKPV-PSYPRSS 1583
            R +RGVG    P        P                       RSY R+PV P+YP+SS
Sbjct: 530  RSVRGVGSRAPPVR------PVSVRDRRPMMSIPARSRPVPPPSRSYDRRPVAPAYPKSS 583

Query: 1582 AKRDFVRRDE-PPPRSRVAVDYGSRAAPERRTSYKVDYAPRGPSYPDDMXXXXXXXXXXX 1406
             KRD+ RR++ PPPRSRVAVDYGSR A ERRTSY+ DY  RGP Y +             
Sbjct: 584  MKRDYGRREDIPPPRSRVAVDYGSRVASERRTSYR-DYPARGPGYTE-----LPRSTSRA 637

Query: 1405 XXXXAYVDEGYERRFERLPP-------SYREGRSRDYDSISGSKRQYSALDDVPSRYAEA 1247
                 YVD+GY +RFER PP       SYREGR RDYD++SGSKR Y+A+DDVP RYA+ 
Sbjct: 638  APRRGYVDDGYGQRFERAPPPPPPPHLSYREGRPRDYDALSGSKRSYAAIDDVPPRYADT 697

Query: 1246 GVRQSRARLDYGVGGSSTQYADTYSERLGRSQIGY-AGSRSSLSAQESHGV 1097
            G RQSRARLDY  GGS++QY D Y +RLGRS +GY  GSRSS+S+Q+SHG+
Sbjct: 698  GARQSRARLDYDYGGSASQYGDAYGDRLGRSSMGYGGGSRSSISSQDSHGL 748


>ref|XP_003530116.1| PREDICTED: uncharacterized protein LOC100777658 [Glycine max]
          Length = 866

 Score =  637 bits (1642), Expect = e-180
 Identities = 331/531 (62%), Positives = 389/531 (73%), Gaps = 10/531 (1%)
 Frame = -2

Query: 2659 KEFEVFVGGLDKDASEDDLKKVFSVIGEVVEVRLMMNPLTKKNKGFAFLRFATVEQARRA 2480
            KEFEVFVGGLDKDA+E DL+KVF  +G V EVRLMMNP TKKNKGFAFLRF TVEQA+RA
Sbjct: 280  KEFEVFVGGLDKDATESDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFETVEQAKRA 339

Query: 2479 VKDLRNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKQYGIDNVDDLTLVEDS 2300
            V +L+NPV+NGKQCGVTPSQDSDTL+LGNICKTWTKEALKEKLK YG+ NV+DLTLVED+
Sbjct: 340  VAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDLTLVEDT 399

Query: 2299 NNEGMNRGFAFLEFSSRSDAMDAYKRLQKRDIFFGVDRNAKVSFADSFIEPDDEIMAQVK 2120
            N+EG NRGFAFLEF SRS+AMDA+KRLQ+RD+ FGVD+ AKVSFADSFI+P DEIMAQVK
Sbjct: 400  NDEGKNRGFAFLEFPSRSEAMDAFKRLQRRDVVFGVDKLAKVSFADSFIDPGDEIMAQVK 459

Query: 2119 TVFVDGLPASWDEDRVKEQLKKFGEVEKVELARNMPSAKRKDFGFVTFDTHDXXXXXXXX 1940
            TVF+D LP SWDED V++ L+K+GE+EK+ELARNMP+A+RKD+GFVTF THD        
Sbjct: 460  TVFIDALPPSWDEDYVRDLLRKYGEIEKIELARNMPAARRKDYGFVTFGTHDAAVKCADS 519

Query: 1939 XXXXELGDGDNKVKVRARLSRPLQRGRGKYATHGDLXXXXXXXXXXXXSWVRPAPHSFPG 1760
                ELG+G  K KVRARLSRPLQRGRGK+++ GD             SW RPAPHSFP 
Sbjct: 520  ITGTELGEGHKKAKVRARLSRPLQRGRGKHSSRGDYRSSRGSGMMTRPSWGRPAPHSFPS 579

Query: 1759 RGLRGVGGHLAPNHGRGFKGPFGFXXXXXXXXXXXXXXXXXXXXRSYSRKPV-PSYPRSS 1583
            R +RGVG    P      +                         RSY R+PV P+YP+SS
Sbjct: 580  RSVRGVGSRTPPVRSVSVR------DRRPMMSIPARSRPVPPPSRSYDRRPVAPAYPKSS 633

Query: 1582 AKRDFVRRDE-PPPRSRVAVDYGSRAAPERRTSYKVDYAPRGPSYPDDMXXXXXXXXXXX 1406
             KRD+ RR++ PPPRSRVAVDYGSR A  RR SY+ DY  RGP Y +             
Sbjct: 634  MKRDYGRREDIPPPRSRVAVDYGSRVASVRRPSYR-DYPARGPGYTE-----LPRSTSRA 687

Query: 1405 XXXXAYVDEGYERRFERLPP-------SYREGRSRDYDSISGSKRQYSALDDVPSRYAEA 1247
                 YVD+GY +RFER PP       SYREGR RDYD++SGSKR Y+A+DD+P RYA+ 
Sbjct: 688  APRRGYVDDGYGQRFERAPPPPPPPHLSYREGRPRDYDALSGSKRPYAAIDDLPPRYADT 747

Query: 1246 GVRQSRARLDYGVGGSSTQYADTYSERLGRSQIGY-AGSRSSLSAQESHGV 1097
            G RQSRARLDY  G S++QY D Y +RLGRS +GY  GSRSS+S+Q+SHG+
Sbjct: 748  GARQSRARLDYDYGDSASQYGDAYGDRLGRSSVGYGGGSRSSISSQDSHGM 798