BLASTX nr result

ID: Coptis23_contig00004546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004546
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nuc...   241   e-118
ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-...   246   e-118
ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nuc...   246   e-118
ref|XP_003618133.1| Guanine nucleotide-exchange protein-like pro...   236   e-117
ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nuc...   241   e-115

>ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein
            1-like [Glycine max]
          Length = 1714

 Score =  241 bits (615), Expect(2) = e-118
 Identities = 126/186 (67%), Positives = 149/186 (80%), Gaps = 7/186 (3%)
 Frame = +3

Query: 669  GVPIMLNPLS--VEVQNGNV-----SDSSEDKKIDFNEGITESKIREDGFLLFKNMCKLS 827
            G+P+  + +S  +EVQN +      +D +   K D   G   SKIREDGFLLFKN+CKLS
Sbjct: 245  GLPLKPSSISPPLEVQNVHTPSPKTADETGTDKFDSEAGAEGSKIREDGFLLFKNLCKLS 304

Query: 828  MKFSAHDNPEDPYLLRGKVLSLELLKVMMENSGPIWRTNDRFLGAIKQYLCLSLLKNSAL 1007
            MKFS+  +P+D  LLRGK+LSLELLKV+M+  G IWR N+RFL AIKQYLCLSLLKNSAL
Sbjct: 305  MKFSSQQHPDDRILLRGKILSLELLKVVMDTGGSIWRVNERFLNAIKQYLCLSLLKNSAL 364

Query: 1008 SVMSVFQLLCSILMSLLSKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLEK 1187
            S M++FQL CSI M+LLSKFRSGLK E+G+FFPML+LRVLENVLQPSFLQKMTVLNLL+K
Sbjct: 365  SAMAIFQLQCSIFMNLLSKFRSGLKKEIGMFFPMLILRVLENVLQPSFLQKMTVLNLLDK 424

Query: 1188 ISQDSQ 1205
            ISQD Q
Sbjct: 425  ISQDPQ 430



 Score =  211 bits (536), Expect(2) = e-118
 Identities = 112/190 (58%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
 Frame = +1

Query: 4   LVSSCKSALDKLETLTDXXXXXXXXXXXXXXXXX--DAEFVLQPLILAIDSSSLKIVEPA 177
           LVS+CKS LDKLE+L++                   DA+ VLQPL LA+DS+  K+VEPA
Sbjct: 36  LVSACKSTLDKLESLSESSGTSPGDTQSPIPGLSSSDADCVLQPLFLALDSAYPKVVEPA 95

Query: 178 LDCLFKLFSLGLIRGEIESNASLIEFRLIDSVCKCGGLNDEVIELALLKLLISSVRSPSV 357
           L+C FKLFSLGL+ GEI  N S I F +ID++CK GGL +E IEL +L++L+S+VRSP +
Sbjct: 96  LECTFKLFSLGLVCGEI--NRSGIVFNMIDAICKSGGLGEEAIELGVLRVLLSAVRSPCI 153

Query: 358 FIRAQCLNQIIKTCYNVYFGSQSGINQICAKAVLAQILTIVFTRVEEDSMDVKLPNVSVT 537
            IRA CL QI++TCYNVY G  +G NQICAK+VLAQI+TIVFTRVEEDSMDV +  VSV+
Sbjct: 154 LIRADCLIQIVRTCYNVYLGGVNGTNQICAKSVLAQIMTIVFTRVEEDSMDVCVKRVSVS 213

Query: 538 DLLELSDKTL 567
           +LLE +DK L
Sbjct: 214 ELLEFTDKNL 223


>ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine
            nucleotide-exchange protein 2-like [Cucumis sativus]
          Length = 1711

 Score =  246 bits (628), Expect(2) = e-118
 Identities = 127/177 (71%), Positives = 150/177 (84%), Gaps = 3/177 (1%)
 Frame = +3

Query: 684  LNPLSVEVQNGNVSDSSEDKKIDFNEGITE---SKIREDGFLLFKNMCKLSMKFSAHDNP 854
            L   S ++QNG+ S    D K + + G TE   SKIREDGF LFKN+CKLSMKFS+ ++P
Sbjct: 257  LYEFSAKLQNGHASPLKVDNKGESDIGETEDVCSKIREDGFHLFKNLCKLSMKFSSPEHP 316

Query: 855  EDPYLLRGKVLSLELLKVMMENSGPIWRTNDRFLGAIKQYLCLSLLKNSALSVMSVFQLL 1034
            +D  L+RGK+LSLELLKV+M+N+GP+WR+N+RFL AIKQ+LCLSLLKNSALS M++FQL 
Sbjct: 317  DDQILIRGKILSLELLKVVMDNAGPVWRSNERFLNAIKQFLCLSLLKNSALSAMAIFQLQ 376

Query: 1035 CSILMSLLSKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLEKISQDSQ 1205
            C I  SLL+KFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLL+KISQDSQ
Sbjct: 377  CCIFTSLLTKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLDKISQDSQ 433



 Score =  205 bits (522), Expect(2) = e-118
 Identities = 105/195 (53%), Positives = 140/195 (71%), Gaps = 7/195 (3%)
 Frame = +1

Query: 4   LVSSCKSALDKLETLTDXXXXXXXXXXXXXXXXXDAEFVLQPLILAIDSSSLKIVEPALD 183
           LVSSCKS LDKL+++ +                 DA+FVLQPL+LA+D++ +K+ EPAL+
Sbjct: 36  LVSSCKSVLDKLDSIAEAVPPDPTSPLAGLSPA-DADFVLQPLLLALDAAYVKVAEPALE 94

Query: 184 CLFKLFSLGLIRGEIE-------SNASLIEFRLIDSVCKCGGLNDEVIELALLKLLISSV 342
           C+FKLFS GL RGEIE       SNAS I +++++SVCK GGL DE IEL +L++L+S+V
Sbjct: 95  CVFKLFSRGLFRGEIERPDGDANSNASSIVYKIVESVCKSGGLGDEGIELTVLRVLLSAV 154

Query: 343 RSPSVFIRAQCLNQIIKTCYNVYFGSQSGINQICAKAVLAQILTIVFTRVEEDSMDVKLP 522
           R P V IR  CL  +++TCYNVY G  SG NQICAK+VL Q++ IVF+RVEEDSMD  + 
Sbjct: 155 RCPCVLIRGDCLVNVVRTCYNVYLGGLSGTNQICAKSVLGQVMVIVFSRVEEDSMDAPMR 214

Query: 523 NVSVTDLLELSDKTL 567
            +SV++LLE +DK L
Sbjct: 215 IISVSELLEFTDKNL 229


>ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein
            2-like [Cucumis sativus] gi|449473000|ref|XP_004153755.1|
            PREDICTED: brefeldin A-inhibited guanine
            nucleotide-exchange protein 2-like [Cucumis sativus]
          Length = 1711

 Score =  246 bits (628), Expect(2) = e-118
 Identities = 127/177 (71%), Positives = 150/177 (84%), Gaps = 3/177 (1%)
 Frame = +3

Query: 684  LNPLSVEVQNGNVSDSSEDKKIDFNEGITE---SKIREDGFLLFKNMCKLSMKFSAHDNP 854
            L   S ++QNG+ S    D K + + G TE   SKIREDGF LFKN+CKLSMKFS+ ++P
Sbjct: 257  LYEFSAKLQNGHASPLKVDNKGESDIGETEDVCSKIREDGFHLFKNLCKLSMKFSSPEHP 316

Query: 855  EDPYLLRGKVLSLELLKVMMENSGPIWRTNDRFLGAIKQYLCLSLLKNSALSVMSVFQLL 1034
            +D  L+RGK+LSLELLKV+M+N+GP+WR+N+RFL AIKQ+LCLSLLKNSALS M++FQL 
Sbjct: 317  DDQILIRGKILSLELLKVVMDNAGPVWRSNERFLNAIKQFLCLSLLKNSALSAMAIFQLQ 376

Query: 1035 CSILMSLLSKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLEKISQDSQ 1205
            C I  SLL+KFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLL+KISQDSQ
Sbjct: 377  CCIFTSLLTKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLDKISQDSQ 433



 Score =  205 bits (522), Expect(2) = e-118
 Identities = 105/195 (53%), Positives = 140/195 (71%), Gaps = 7/195 (3%)
 Frame = +1

Query: 4   LVSSCKSALDKLETLTDXXXXXXXXXXXXXXXXXDAEFVLQPLILAIDSSSLKIVEPALD 183
           LVSSCKS LDKL+++ +                 DA+FVLQPL+LA+D++ +K+ EPAL+
Sbjct: 36  LVSSCKSVLDKLDSIAEAVPPDPTSPLAGLSPA-DADFVLQPLLLALDAAYVKVAEPALE 94

Query: 184 CLFKLFSLGLIRGEIE-------SNASLIEFRLIDSVCKCGGLNDEVIELALLKLLISSV 342
           C+FKLFS GL RGEIE       SNAS I +++++SVCK GGL DE IEL +L++L+S+V
Sbjct: 95  CVFKLFSRGLFRGEIERPDGDANSNASSIVYKIVESVCKSGGLGDEGIELTVLRVLLSAV 154

Query: 343 RSPSVFIRAQCLNQIIKTCYNVYFGSQSGINQICAKAVLAQILTIVFTRVEEDSMDVKLP 522
           R P V IR  CL  +++TCYNVY G  SG NQICAK+VL Q++ IVF+RVEEDSMD  + 
Sbjct: 155 RCPCVLIRGDCLVNVVRTCYNVYLGGLSGTNQICAKSVLGQVMVIVFSRVEEDSMDAPMR 214

Query: 523 NVSVTDLLELSDKTL 567
            +SV++LLE +DK L
Sbjct: 215 IISVSELLEFTDKNL 229


>ref|XP_003618133.1| Guanine nucleotide-exchange protein-like protein [Medicago
            truncatula] gi|355519468|gb|AET01092.1| Guanine
            nucleotide-exchange protein-like protein [Medicago
            truncatula]
          Length = 697

 Score =  236 bits (602), Expect(2) = e-117
 Identities = 119/176 (67%), Positives = 145/176 (82%), Gaps = 4/176 (2%)
 Frame = +3

Query: 690  PLSVEVQNGN----VSDSSEDKKIDFNEGITESKIREDGFLLFKNMCKLSMKFSAHDNPE 857
            PL++E+ N +    +S   +D +   ++G + SKIREDGFLLFKN+CKLSMKFS+  +P+
Sbjct: 245  PLNLELPNASPPVSMSKQVDDTEPGPDDGSSSSKIREDGFLLFKNLCKLSMKFSSQQHPD 304

Query: 858  DPYLLRGKVLSLELLKVMMENSGPIWRTNDRFLGAIKQYLCLSLLKNSALSVMSVFQLLC 1037
            D  LLRGK+LSLELL V+M+N   IWR N+RFL  IKQYLCLSLLKNSALS M++FQL C
Sbjct: 305  DRILLRGKILSLELLNVVMDNGSSIWRNNERFLNGIKQYLCLSLLKNSALSAMAIFQLQC 364

Query: 1038 SILMSLLSKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLLEKISQDSQ 1205
            SI M+LLSKFRSGLK E+G+FFPML+LRVLENVLQPSFLQKMTVLNLL+K+SQD Q
Sbjct: 365  SIFMNLLSKFRSGLKKEIGMFFPMLILRVLENVLQPSFLQKMTVLNLLDKLSQDPQ 420



 Score =  215 bits (547), Expect(2) = e-117
 Identities = 113/189 (59%), Positives = 140/189 (74%)
 Frame = +1

Query: 1   QLVSSCKSALDKLETLTDXXXXXXXXXXXXXXXXXDAEFVLQPLILAIDSSSLKIVEPAL 180
           QLVSSCKS +DKLE+L +                 DAE+VLQPL LA+DS+  K+VEPAL
Sbjct: 35  QLVSSCKSTIDKLESLPECDDSDSKSPLVGIPSS-DAEYVLQPLFLALDSAYAKVVEPAL 93

Query: 181 DCLFKLFSLGLIRGEIESNASLIEFRLIDSVCKCGGLNDEVIELALLKLLISSVRSPSVF 360
           DC FKL SLGL+RGEI +  S + F +ID++CK GGL +E IEL +L++L+S+VRSP V 
Sbjct: 94  DCTFKLLSLGLVRGEIIN--SHLFFNIIDAICKSGGLGEEAIELGVLRVLLSAVRSPCVL 151

Query: 361 IRAQCLNQIIKTCYNVYFGSQSGINQICAKAVLAQILTIVFTRVEEDSMDVKLPNVSVTD 540
           IR  CL QI++TCYNVY G  +G NQICAK+VLAQI+TIVFTRVEEDSMDV +  VSV +
Sbjct: 152 IRGDCLVQIVRTCYNVYLGGVNGTNQICAKSVLAQIVTIVFTRVEEDSMDVSVKRVSVNE 211

Query: 541 LLELSDKTL 567
           LLE +DK L
Sbjct: 212 LLEFTDKNL 220


>ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein
            1-like isoform 1 [Glycine max]
          Length = 1721

 Score =  241 bits (614), Expect(2) = e-115
 Identities = 129/188 (68%), Positives = 147/188 (78%), Gaps = 9/188 (4%)
 Frame = +3

Query: 669  GVPIMLNPLSV----EVQN-----GNVSDSSEDKKIDFNEGITESKIREDGFLLFKNMCK 821
            GVP  L PLS+    EVQN        +D +   K D   G   SKIREDGFLLFKN+CK
Sbjct: 252  GVP--LKPLSISLPLEVQNVQTPSPKAADETAPDKFDNEAGSDGSKIREDGFLLFKNLCK 309

Query: 822  LSMKFSAHDNPEDPYLLRGKVLSLELLKVMMENSGPIWRTNDRFLGAIKQYLCLSLLKNS 1001
            LSMKFS+  +P+D  LLRGK+LSLELLKV+M+  G IW  N+RFL AIKQYLCLSLLKNS
Sbjct: 310  LSMKFSSQQHPDDRILLRGKILSLELLKVVMDTGGSIWHVNERFLNAIKQYLCLSLLKNS 369

Query: 1002 ALSVMSVFQLLCSILMSLLSKFRSGLKAEVGIFFPMLVLRVLENVLQPSFLQKMTVLNLL 1181
            ALS M++FQL CSI M+LLSKFRSGLK E+G+FFPML+LRVLENVLQPSFLQKMTVLNLL
Sbjct: 370  ALSAMAIFQLQCSIFMNLLSKFRSGLKKEIGMFFPMLILRVLENVLQPSFLQKMTVLNLL 429

Query: 1182 EKISQDSQ 1205
            +KISQD Q
Sbjct: 430  DKISQDPQ 437



 Score =  202 bits (513), Expect(2) = e-115
 Identities = 107/195 (54%), Positives = 141/195 (72%), Gaps = 7/195 (3%)
 Frame = +1

Query: 4   LVSSCKSALDKLETLTDXXXXXXXXXXXXXXXXX-DAEFVLQPLILAIDSSSLKIVEPAL 180
           +VS+CKS LDKLE+L++                  DA+ VLQPL LA+DS+  K+VEPAL
Sbjct: 36  VVSACKSTLDKLESLSESETSPGDTQSPIPGISSSDADCVLQPLFLALDSAYPKVVEPAL 95

Query: 181 DCLFKLFSLGLIRGEIE------SNASLIEFRLIDSVCKCGGLNDEVIELALLKLLISSV 342
           +C +KLFSLGL+ GEI       ++ S + F +ID++CK GGL ++ IEL +L++L+S+V
Sbjct: 96  ECTYKLFSLGLVCGEINRPDNSSASQSGVVFNMIDAICKSGGLGEDAIELGVLRVLLSAV 155

Query: 343 RSPSVFIRAQCLNQIIKTCYNVYFGSQSGINQICAKAVLAQILTIVFTRVEEDSMDVKLP 522
           RSP V IRA CL QI++TCYNVY G  +G NQICAK+VLAQI+ IVFTRVE+DSMDV L 
Sbjct: 156 RSPCVLIRADCLIQIVRTCYNVYLGGVNGTNQICAKSVLAQIMIIVFTRVEKDSMDVFLK 215

Query: 523 NVSVTDLLELSDKTL 567
            VSV++LLE +DK L
Sbjct: 216 RVSVSELLEFTDKNL 230


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