BLASTX nr result

ID: Coptis23_contig00004543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004543
         (1181 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]   249   1e-63
ref|XP_002530358.1| conserved hypothetical protein [Ricinus comm...   224   4e-56
ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205...   211   4e-52
ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44
ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago ...   171   3e-40

>emb|CAN64638.1| hypothetical protein VITISV_033929 [Vitis vinifera]
          Length = 865

 Score =  249 bits (636), Expect = 1e-63
 Identities = 155/378 (41%), Positives = 205/378 (54%), Gaps = 3/378 (0%)
 Frame = -2

Query: 1126 MNFSEEWKSLWTINSVYSPPLLITKPSSKQLGPLLFTPSPKPQTKXXXXXXXXXXXXXXX 947
            M+FSEEWKS+W I+SV++PPLLI+  S   LGPL F PSP   T                
Sbjct: 1    MDFSEEWKSIWPISSVFTPPLLIS--SKPSLGPLFFNPSPNTLTPLFSKPSFSFPPHLPR 58

Query: 946  XXXXXXXXXXXXXXQGKKNNNLQLLKCSKTDFLLFFPTGGDLNRVGFVKLVWNGSEFDI- 770
                              ++ L LL+C     L  FPTG + +++GF+ L    S  D+ 
Sbjct: 59   SSLL--------------HDRLHLLRCPNAAVLALFPTGVNSDQIGFLLLSVKDSCLDVR 104

Query: 769  SDSDDDLMTTEHEFDDGLCQISVSAVSVDDFEAIGN-SVIGYLLASCLDTVHLYRVEIRN 593
            +D + D+  ++   +  + QI  + +    +   GN   +G +LA  + +VH + V  RN
Sbjct: 105  ADRNGDVFVSKKRLNHRIVQILATPIG---YSFSGNPDSVGLVLACTMYSVHWFSV--RN 159

Query: 592  SYTDFEKPVLAYLGSNEF-DCRVVHACWSPHLPEECLVLLETGDLFLFDMEGCVVAEEFP 416
               D E P L YLG   F  C VV ACWSPHL EECLVLLE+G+LFLFD++ C     F 
Sbjct: 160  DNIDSE-PGLIYLGGKVFKSCAVVSACWSPHLSEECLVLLESGELFLFDLDYCCSNSNF- 217

Query: 415  VDLEGTRIGVLLERFXXXXXXXXXXXXXKWLSCAFSWHPRIFIVACSTTVCQVDWRFEEN 236
               +G R+ ++                 KWL C FSWHPRI IVA S  V  VD RF+E 
Sbjct: 218  ---KGNRLKIMWHN-------ADCSGDGKWLGCEFSWHPRILIVARSDAVFLVDLRFDEC 267

Query: 235  DVSVLVKDDMFHLNSTVEDSRFIAFGMAGSDGFHFAVATENHLFLIDIRRPMMPVLQWAH 56
             VS L K  M  +   V    FI+F MAGS+GFHF VA+ + LFL DIR P++PVLQW+H
Sbjct: 268  SVSCLAKIGMPSVGELVHKEPFISFSMAGSNGFHFTVASNSLLFLYDIRNPLIPVLQWSH 327

Query: 55   DLHKPDYINVFKLSELRT 2
             + KP Y+ VFKLSELR+
Sbjct: 328  GIDKPCYVRVFKLSELRS 345


>ref|XP_002530358.1| conserved hypothetical protein [Ricinus communis]
            gi|223530105|gb|EEF32019.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 912

 Score =  224 bits (570), Expect = 4e-56
 Identities = 152/408 (37%), Positives = 207/408 (50%), Gaps = 33/408 (8%)
 Frame = -2

Query: 1126 MNFSEEWKSLWTINSVYSPPLLITKPSSKQ-LGPLLFTP-------------------SP 1007
            M+ SEEWKSL+ I SV+  PLL++ P+SK  LGPL F P                   +P
Sbjct: 1    MDLSEEWKSLFPIGSVFDAPLLLSSPTSKSILGPLFFNPNRKTLTQLYKSPSLFPPLLNP 60

Query: 1006 KPQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGKKN-------NNLQLLKCSKTD-F 851
             P+                               Q   N       N LQ L C   +  
Sbjct: 61   PPRLSLSRFLTTSTTFDSPIPLSTASSITSRLGSQFHDNSASLLAHNQLQFLNCPHDNSV 120

Query: 850  LLFFPTGGDLNRVGFVKLVWNGSEF-DISDSDDDLMTTEHEFDDGLCQISVSAVSVDDFE 674
            ++FF TG + ++VGF+ L  N      + DS   +       +  + +I V+ V VD   
Sbjct: 121  IVFFSTGCNHDQVGFLLLSVNDKRLCAVGDSRGGVFVANKCLNQRIVKILVNPV-VDSGY 179

Query: 673  AIGNS---VIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLGSNEF-DCRVVHACWSP 506
              GN+   ++GYLL   L +VH + V+I       E+P+L ++G   F  C +V ACWSP
Sbjct: 180  FEGNASSKIVGYLLVYTLFSVHWFCVKIGEIN---ERPILGHVGCKTFKSCSIVDACWSP 236

Query: 505  HLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXXXXXXXXXXXXKW 326
            HL EE +VLLE G LFLFD+     ++       GT++ VL +                W
Sbjct: 237  HLIEESVVLLENGGLFLFDLN----SDSSNAYFRGTKLKVLWDDLGKSKNFK-------W 285

Query: 325  LSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSRFIAFGMAGS 146
            L C FSWHPRI IVA S  V  VDWR++E  V+ L   DMF + + VE+ RF+ F MA S
Sbjct: 286  LGCQFSWHPRILIVASSDAVFLVDWRYDEFKVTCLANIDMFGVYAPVENERFLTFSMAVS 345

Query: 145  DGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRT 2
            D F F +A+EN L L D+R+P+MPVLQWAH L +P YI+VF+LSELR+
Sbjct: 346  DHFQFVLASENMLALCDVRKPLMPVLQWAHALDRPCYIDVFRLSELRS 393


>ref|XP_004145472.1| PREDICTED: uncharacterized protein LOC101205354 [Cucumis sativus]
          Length = 907

 Score =  211 bits (536), Expect = 4e-52
 Identities = 148/402 (36%), Positives = 208/402 (51%), Gaps = 31/402 (7%)
 Frame = -2

Query: 1114 EEWKSLWTINSVYSPPLLITKPSSKQ-LGPLLFT----------------PSPKPQTKXX 986
            EEWKSL+ I +V+  PLLI+  S K  +GPL+F                 PS  P +   
Sbjct: 4    EEWKSLFPIGTVFKSPLLISGSSVKNSIGPLVFNPVPTSLTRLFSSQSLLPSLSPPSVLN 63

Query: 985  XXXXXXXXXXXXXXXXXXXXXXXXXXXQGK------KNNNLQLLKC-SKTDFLLFFPTGG 827
                                                + N LQ L C + +  ++FFPTG 
Sbjct: 64   LPRFLLTSSSVVPSTSSSVASLFGEQQCCSDPPSVLRYNRLQCLPCPNSSSVVVFFPTGP 123

Query: 826  DLNRVGFVKLVWNGSEFDI-SDSDDDLMTTEHEFDDGLCQISVSAVS--VDDFEAIGNSV 656
            + + VGF+ +  NGS  D+ SD  +D+ + E E +  +  I+V+  S  VDD        
Sbjct: 124  NSDHVGFLVVSSNGSGLDVQSDCSNDVFSVESELNYQIFGIAVNPNSGFVDD----SYED 179

Query: 655  IGYLLASCLDTVHLYRVEIRNSYTDFEKPV-LAYLGSNEFD-CRVVHACWSPHLPEECLV 482
            IG+LLA  + +V  + V+     +  +  V L ++GS  F  C VVHACW+PHL EE +V
Sbjct: 180  IGFLLAYTMYSVEWFIVKNHAIGSSCQPRVSLVHMGSKVFKTCSVVHACWNPHLSEESVV 239

Query: 481  LLETGDLFLFDMEGCVVAEEFP--VDLEGTRIGVLLERFXXXXXXXXXXXXXKWLSCAFS 308
            LLE G LFLFDME  +  +++   V+L+G ++ V  +                WLSC FS
Sbjct: 240  LLEDGSLFLFDMEPLLKTKDYNANVNLKGIKLKVSWDGLDCSKKVK-------WLSCEFS 292

Query: 307  WHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSRFIAFGMAGSDGFHFA 128
            WHPRI IVA S  V  VD R  + ++S L+K + F   S  E  +F+AF  AGSDGF+F+
Sbjct: 293  WHPRILIVARSDAVFLVDLRENDCNISCLMKIETFPTYSLGEKEQFLAFSKAGSDGFYFS 352

Query: 127  VATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRT 2
            +A+ + L L DIR+P+ PVLQW H L  P Y+NVF LSELR+
Sbjct: 353  IASNHLLLLCDIRKPLSPVLQWTHGLDDPSYMNVFSLSELRS 394


>ref|XP_002317716.1| predicted protein [Populus trichocarpa] gi|222858389|gb|EEE95936.1|
            predicted protein [Populus trichocarpa]
          Length = 906

 Score =  183 bits (465), Expect = 6e-44
 Identities = 132/409 (32%), Positives = 191/409 (46%), Gaps = 34/409 (8%)
 Frame = -2

Query: 1126 MNFSEEWKSLWTINSVYSPPLLITKPSSKQ----------------------LGPLLFTP 1013
            + FS+EWKS + I++V   PLL++K +S+                       L P L  P
Sbjct: 4    IEFSQEWKSGFPIDTVSKAPLLLSKQTSESLIGPLVFNPIPESLAHLFTSPALSPPLLNP 63

Query: 1012 SPKPQTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGKKN-----NNLQLLKCSKTD-F 851
             P                                      +     N LQ LKC   D  
Sbjct: 64   PPHLSLTRFISTSTLADSPLPLSTASSIAFSFGPQDLHFSSPLLAYNRLQFLKCPHDDTV 123

Query: 850  LLFFPTGGDLNRVGFVKL-VWNGSEFDISDSDDDLMTTEHEFDDGLCQISVSAVSVDDFE 674
            ++FF TG +L+RVGF+ L V + S     D    + T        + ++ V+ +  D F 
Sbjct: 124  VVFFSTGTNLDRVGFLLLSVKDKSLVATGDQKGGIFTASKSLGSKIVRVLVNPIEDDSF- 182

Query: 673  AIGN----SVIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLGSNEF-DCRVVHACWS 509
              GN       GYLL   + +V+ + V+   S    ++PVL+YLG   F  C +  ACWS
Sbjct: 183  LNGNYSFSGSFGYLLVYTMYSVNWFCVKYSES---MKRPVLSYLGCKNFKSCGIASACWS 239

Query: 508  PHLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXXXXXXXXXXXXK 329
            P++  + +VLLE G LFLFD+E    A+   +   GT++ V                  K
Sbjct: 240  PYIKVQSVVLLENGTLFLFDLE----ADCSDMYFRGTKLKV-------SWGDEGKLGDGK 288

Query: 328  WLSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVEDSRFIAFGMAG 149
            WL C FSWH R+ IVA S  V  +DW+    DV+ L + DMF   +  E  RF+A   A 
Sbjct: 289  WLGCEFSWHCRVLIVARSDAVFMIDWKCGGFDVTCLARIDMFSAYALSEKERFLAMSRAV 348

Query: 148  SDGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSELRT 2
            SD  HF + +E  L + D+R+PM+P+LQWAH L KP +I+VF+LS+LR+
Sbjct: 349  SDSLHFVLVSETMLVICDVRKPMIPLLQWAHGLDKPCFIDVFRLSDLRS 397


>ref|XP_003600764.1| hypothetical protein MTR_3g069120 [Medicago truncatula]
           gi|355489812|gb|AES71015.1| hypothetical protein
           MTR_3g069120 [Medicago truncatula]
          Length = 884

 Score =  171 bits (434), Expect = 3e-40
 Identities = 114/303 (37%), Positives = 161/303 (53%), Gaps = 6/303 (1%)
 Frame = -2

Query: 892 NNNLQLLKCSKTD-FLLFFPTGGDLNRVGFVKLVWNGSEFDIS-DSDDDLMTTEHEFDDG 719
           +N +QLLKC  T   ++ FPTG +   +GF  L    S  +   D   D+          
Sbjct: 100 HNRIQLLKCPNTPKAVVIFPTGANDETIGFFMLGVKDSLLETRLDVKGDVFRASTGSSSR 159

Query: 718 LCQISVSAVSVDDFEAIGNSVIGYLLASCLDTVHLYRVEIRNSYTDFEKPVLAYLG-SNE 542
           + ++SV+ V+ DD E   + VIGY+LAS   +V  + V+   S    + P ++YLG S  
Sbjct: 160 ILRMSVNPVTEDDSEPDSSPVIGYVLASSRYSVCWFDVKHNLSS---DSPSMSYLGRSKV 216

Query: 541 FDCRVVHACWSPHLPEECLVLLETGDLFLFDMEGCVVAEEFPVDLEGTRIGVLLERFXXX 362
           F   VV ACWSPH+ EE +VLLE+G LFLFD++     + F    +GTR+ V        
Sbjct: 217 FKEAVVRACWSPHILEESMVLLESGQLFLFDVDAQGSMKTF----KGTRLRV-------P 265

Query: 361 XXXXXXXXXXKWLSCAFSWHPRIFIVACSTTVCQVDWRFEENDVSVLVKDDMFHLNSTVE 182
                      WLSC FSWHPRI IVA    V  VD+R  E +V+ L+K +   + +  E
Sbjct: 266 WNDSACSENKAWLSCEFSWHPRILIVARYDAVFLVDFRSNECNVTCLLKIETLRMYAPDE 325

Query: 181 DSRFIAFGMAGS---DGFHFAVATENHLFLIDIRRPMMPVLQWAHDLHKPDYINVFKLSE 11
           + RF+A    G+   D F+F V + + L L DIR P+ PVLQW H + +P Y+ V  LS 
Sbjct: 326 NERFLALSRVGTESPDNFYFTVTSRSLLVLCDIRNPLKPVLQWRHGIDEPCYMTVLSLST 385

Query: 10  LRT 2
           LR+
Sbjct: 386 LRS 388


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