BLASTX nr result

ID: Coptis23_contig00004542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004542
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphat...   432   e-119
gb|ABK95109.1| unknown [Populus trichocarpa]                          426   e-117
ref|XP_002529943.1| conserved hypothetical protein [Ricinus comm...   425   e-116
ref|XP_002328158.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111
ref|XP_002314265.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110

>ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit
            3-like [Vitis vinifera]
          Length = 850

 Score =  432 bits (1112), Expect = e-119
 Identities = 238/417 (57%), Positives = 291/417 (69%), Gaps = 5/417 (1%)
 Frame = -1

Query: 1236 VLSSDVNKPTISSSGRQAPRAGNLGHITRISNKLIQLGNGNTQIQAYLQESGEWVDWEAT 1057
            ++S ++N+PTI ++GR APRAGNLGHITRISNKL QLG+ N++IQA+LQE+ EW +W+ T
Sbjct: 420  IISGNLNQPTIPAAGRNAPRAGNLGHITRISNKLGQLGSSNSRIQAFLQENSEWNEWQTT 479

Query: 1056 VLQKRNSVENVYHWACGRPTALQDRTRDSDEDDIQERDYDVGALANNLSMAFRYNIYEDD 877
            VLQ+RN+VENVY WACGRPTALQDRTRDSDEDD+ +RDYDV ALANNLS AFRY IY ++
Sbjct: 480  VLQERNAVENVYRWACGRPTALQDRTRDSDEDDLHDRDYDVAALANNLSQAFRYKIYGNE 539

Query: 876  DTEEGRGSLERDDEDVYFDDESAEVVISSLRLGDDHESLFTNSNWFAFNDEQIGNDSLST 697
            D EE  G+L+RDDEDVYFDDESAEVVISSLRLGDD  SLFTNSNWFAF D +I    +ST
Sbjct: 540  DGEEDHGALDRDDEDVYFDDESAEVVISSLRLGDDQGSLFTNSNWFAFQDNRIDETPVST 599

Query: 696  S--EKMSEINLNATSNACXXXXXXXXXXXXXXDLIDSTSSDRTSGPGTSSSDEFTLDVSK 523
            S  E M E+NLN T+N                +L +  S D  +G   S+ D      S 
Sbjct: 600  SPAEMMDEVNLNGTTNGGNSSSDDEVVVGEDEELAE--SKDSINGTSISNIDFLNGFNSS 657

Query: 522  SDEEMSSPDEKASPSGCEDFSQNDTAKNNESVSDRPLPDWVGWRETADTHVGGSDSGAF- 346
             +  +++ +EK S SG   F Q +T  N++   DRPLP+WVGW E+AD  VGGS    F 
Sbjct: 658  MNGVINTQNEKPSASGDLSFFQFETTDNDDMFGDRPLPEWVGWGESADLQVGGSSLNPFE 717

Query: 345  GENGKSDVDLSGPADPIGSTSVSLSNGNVKEPNDTSSSMDSENGSVGTHTSCR-AAVPSL 169
             ENG +DV    PA+       S S+G +  PN + ++  SE GS G+ +S R A VPSL
Sbjct: 718  DENGDTDVTHPIPAEEAVLNVNSSSHGELVLPNGSPTATGSE-GSAGSGSSQRGATVPSL 776

Query: 168  FEEDVEFVGVEPEGTEKAMEQALKEGTVGEAGALKRSYTPKASEKKSEED-GEGMLE 1
            FEEDVEFVGVE EGTEKAMEQALKEG VGEAG LKR+   K  EK++ +D G GM E
Sbjct: 777  FEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNIIAKVPEKENSDDGGAGMKE 833


>gb|ABK95109.1| unknown [Populus trichocarpa]
          Length = 840

 Score =  426 bits (1095), Expect = e-117
 Identities = 228/410 (55%), Positives = 284/410 (69%), Gaps = 3/410 (0%)
 Frame = -1

Query: 1233 LSSDVNKPTISSSGRQAPRAGNLGHITRISNKLIQLGNGNTQIQAYLQESGEWVDWEATV 1054
            L S  NKPT+ ++G+QAPRAGNLGHITRISNKL QLGN +++IQ YLQE+ EW++W+ATV
Sbjct: 421  LISGDNKPTVPAAGKQAPRAGNLGHITRISNKLFQLGNISSRIQTYLQENSEWMEWQATV 480

Query: 1053 LQKRNSVENVYHWACGRPTALQDRTRDSDEDDIQERDYDVGALANNLSMAFRYNIYEDDD 874
            LQ+RN+VENVY WACGRPTALQDRTRDSD+DD+ +RDYDV ALANNLS AFRY IY ++D
Sbjct: 481  LQERNAVENVYRWACGRPTALQDRTRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNED 540

Query: 873  TEEGRGSLERDDEDVYFDDESAEVVISSLRLGDDHESLFTNSNWFAFNDEQIGNDSLSTS 694
             EE  GSL+RDDEDVYFDDESAEVVISSLRLGDD  SLFTNSNWFAF D++IG+  +STS
Sbjct: 541  NEEDNGSLDRDDEDVYFDDESAEVVISSLRLGDDQGSLFTNSNWFAFQDDRIGDSLVSTS 600

Query: 693  --EKMSEINLNATSNACXXXXXXXXXXXXXXDLIDSTSSDRTSGPGTSSSDEFTLDVSKS 520
              E M +INLN  +N                +L +S    + S  GTS+S+   +D    
Sbjct: 601  PGEMMDQINLNGNANGGNSGSDDEVVVGEEDELTES----KDSVNGTSTSNTNLIDQFPG 656

Query: 519  DEEMSSPDEKASPSGCEDFSQNDTAKNNESVSDRPLPDWVGWRETADTHVGGSDSGAFGE 340
               +S   +  +P     F + +T+   E   DRPLP+WVGW E++D   GGS    F +
Sbjct: 657  SGLVSQSGDANAPD--TSFFKYETSVKEELFGDRPLPEWVGWGESSDLQAGGSTVNPFED 714

Query: 339  NGKSDVDLSGPADPIGSTSVSLSNGNVKEPNDTSSSMDSENGSVGTHTSCRA-AVPSLFE 163
            +  SD  LS  A  +   + S S+G    PN  S S DS + SV + +S ++  +PSLFE
Sbjct: 715  HDNSDDSLSSQAKTVTPGASSPSSGESILPNGLSPSKDSSDASVSSDSSKKSPTMPSLFE 774

Query: 162  EDVEFVGVEPEGTEKAMEQALKEGTVGEAGALKRSYTPKASEKKSEEDGE 13
            EDVEFVGVE EGTEKAMEQALKEG VGEAG LKR+ +PK  EK++ +  E
Sbjct: 775  EDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNISPKVPEKENSDTAE 824


>ref|XP_002529943.1| conserved hypothetical protein [Ricinus communis]
            gi|223530573|gb|EEF32451.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 845

 Score =  425 bits (1093), Expect = e-116
 Identities = 224/412 (54%), Positives = 288/412 (69%), Gaps = 5/412 (1%)
 Frame = -1

Query: 1236 VLSSDVNKPTISSSGRQAPRAGNLGHITRISNKLIQLGNGNTQIQAYLQESGEWVDWEAT 1057
            ++S DVN+PT+ ++G+Q PRAGNLGHITRISNK++QLGN N  IQ YLQE+ EW +W+A+
Sbjct: 421  IVSGDVNQPTVPAAGKQGPRAGNLGHITRISNKIVQLGNTNVHIQTYLQENSEWNEWQAS 480

Query: 1056 VLQKRNSVENVYHWACGRPTALQDRTRDSDEDDIQERDYDVGALANNLSMAFRYNIYEDD 877
            +LQ+RN+VENVY WACGRPTALQDRTRDSDEDD+ +RDYDV ALANNLS AFRY +Y ++
Sbjct: 481  ILQERNAVENVYRWACGRPTALQDRTRDSDEDDLHDRDYDVAALANNLSQAFRYKMYGNE 540

Query: 876  DTEEGRGSLERDDEDVYFDDESAEVVISSLRLGDDH-ESLFTNSNWFAFNDEQIGNDSLS 700
            D EE  G L+RDDEDVYFDDESAEVVISSLRLGDD   SLFTNSNWFAF D+++GN  +S
Sbjct: 541  DNEEDNGGLDRDDEDVYFDDESAEVVISSLRLGDDQGSSLFTNSNWFAFQDDRVGNAPVS 600

Query: 699  TS--EKMSEINLNATSNACXXXXXXXXXXXXXXDLIDSTSS-DRTSGPGTSSSDEFTLDV 529
            TS  E M EINLN  +N                +L ++  S +  S   T+ ++ F +  
Sbjct: 601  TSPAEMMDEINLNGNANGGNSSSDDEVVVGEDDELTENKHSVNPASTSSTNIANGFPIPQ 660

Query: 528  SKSDEEMSSPDEKASPSGCEDFSQNDTAKNNESVSDRPLPDWVGWRETADTHVGGSDSGA 349
            S   E+ ++P++         F + DT  N +   DRP P+WVGW E++D  +GGS +  
Sbjct: 661  S---EKTTTPNDIG-------FFRFDTPDNEDLFGDRPFPEWVGWGESSDLQIGGSSANP 710

Query: 348  FGENGKSDVDLSGPADPIGSTSVSLSNGNVKEPNDTSSSMDSENGSVGTHTSCRAA-VPS 172
            F ++  SDV+LS  A+       S ++G    PN +S + +S +GS+    S ++A VPS
Sbjct: 711  FEDHDSSDVNLSSQAEVATPDVNSPASGESILPNGSSPTKNSSDGSMSNDASHKSATVPS 770

Query: 171  LFEEDVEFVGVEPEGTEKAMEQALKEGTVGEAGALKRSYTPKASEKKSEEDG 16
            LFEEDVEFVGVE EGTEKAMEQALKEG VGEAG LKR+  PK  EK++ +DG
Sbjct: 771  LFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMIPKVLEKENSDDG 822


>ref|XP_002328158.1| predicted protein [Populus trichocarpa] gi|222837673|gb|EEE76038.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  407 bits (1045), Expect = e-111
 Identities = 222/409 (54%), Positives = 272/409 (66%), Gaps = 2/409 (0%)
 Frame = -1

Query: 1233 LSSDVNKPTISSSGRQAPRAGNLGHITRISNKLIQLGNGNTQIQAYLQESGEWVDWEATV 1054
            L S  NKPT+ ++G+QAPRAGNLGHITRISNKL QLGN +++IQ YLQE+ EW++W+ATV
Sbjct: 421  LISGDNKPTVPAAGKQAPRAGNLGHITRISNKLFQLGNISSRIQTYLQENSEWMEWQATV 480

Query: 1053 LQKRNSVENVYHWACGRPTALQDRTRDSDEDDIQERDYDVGALANNLSMAFRYNIYEDDD 874
            LQ+RN+VENVY WACGRPTALQDRTRDSD+DD+ +RDYDV ALANNLS AFRY IY ++D
Sbjct: 481  LQERNAVENVYRWACGRPTALQDRTRDSDDDDLHDRDYDVAALANNLSQAFRYKIYGNED 540

Query: 873  TEEGRGSLERDDEDVYFDDESAEVVISSLRLGDDHESLFTNSNWFAFNDEQIGNDSLSTS 694
             EE  GSL+RDDEDVYFDDESAEVVISSLRLGDD  SLFTNSNWFAF D++IG+  +STS
Sbjct: 541  NEEDNGSLDRDDEDVYFDDESAEVVISSLRLGDDQGSLFTNSNWFAFQDDRIGDSLVSTS 600

Query: 693  --EKMSEINLNATSNACXXXXXXXXXXXXXXDLIDSTSSDRTSGPGTSSSDEFTLDVSKS 520
              E M +INLN  +N                +L +S    + S  GTS+S+   +D    
Sbjct: 601  PGEMMDQINLNGNANGGNSGSDDEVVVGEEDELTES----KDSVNGTSTSNTNLIDQFPG 656

Query: 519  DEEMSSPDEKASPSGCEDFSQNDTAKNNESVSDRPLPDWVGWRETADTHVGGSDSGAFGE 340
               +S   +  +P     F + +T+   E   DRPLP+WVGW E++D   GGS    F +
Sbjct: 657  SGLVSQSGDANAPD--TSFFKYETSVKEELFGDRPLPEWVGWGESSDLQAGGSTVNPFED 714

Query: 339  NGKSDVDLSGPADPIGSTSVSLSNGNVKEPNDTSSSMDSENGSVGTHTSCRAAVPSLFEE 160
            +  SD  LS  A                + +D S S DS   S          +PSLFEE
Sbjct: 715  HDNSDDSLSSQAK--------------TDSSDASVSSDSSKKS--------PTMPSLFEE 752

Query: 159  DVEFVGVEPEGTEKAMEQALKEGTVGEAGALKRSYTPKASEKKSEEDGE 13
            DVEFVGVE EGTEKAMEQALKEG VGEAG LKR+ +PK  EK++ +  E
Sbjct: 753  DVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNISPKVPEKENSDTAE 801


>ref|XP_002314265.1| predicted protein [Populus trichocarpa] gi|222850673|gb|EEE88220.1|
            predicted protein [Populus trichocarpa]
          Length = 830

 Score =  405 bits (1040), Expect = e-110
 Identities = 220/411 (53%), Positives = 270/411 (65%), Gaps = 3/411 (0%)
 Frame = -1

Query: 1236 VLSSDVNKPTISSSGRQAPRAGNLGHITRISNKLIQLGNGNTQIQAYLQESGEWVDWEAT 1057
            V+S D+ KPT+ ++G+QAPR GNLGHITRISNKL+QLGN +++IQ YLQE+ EW +W+A+
Sbjct: 421  VISGDIIKPTLPAAGKQAPRVGNLGHITRISNKLVQLGNSSSRIQTYLQENSEWNEWQAS 480

Query: 1056 VLQKRNSVENVYHWACGRPTALQDRTRDSDEDDIQERDYDVGALANNLSMAFRYNIYEDD 877
            VLQ+RN+VENVY WACGRPTALQDRTRDSDEDD+ +RDYDV ALANNLS AFRY IY ++
Sbjct: 481  VLQERNAVENVYRWACGRPTALQDRTRDSDEDDLHDRDYDVAALANNLSQAFRYKIYGNE 540

Query: 876  DTEEGRGSLERDDEDVYFDDESAEVVISSLRLGDDHESLFTNSNWFAFNDEQIGNDSLST 697
            D EE  G L+RDDEDVYFDDESAEVVISSLRLGDD  SLFTNSNWFAF D++IG+  +ST
Sbjct: 541  DNEEDNGGLDRDDEDVYFDDESAEVVISSLRLGDDQGSLFTNSNWFAFQDDRIGDAPVST 600

Query: 696  S--EKMSEINLNATSNACXXXXXXXXXXXXXXDLIDSTSSDRTSGPGTSSSDEFTLDVSK 523
            S  E M +INLN  ++A               +  D  +  + S  GTS+S+   LD   
Sbjct: 601  SPGEMMDQINLNGNTDANGGNSCSHDEVVVGEE--DELTESKDSVNGTSTSNTNLLDQFP 658

Query: 522  SDEEMSSPDEKASPSGCEDFSQNDTAKNNESVSDRPLPDWVGWRETADTH-VGGSDSGAF 346
                +S   +  +P     F + +   N +   DRPLP+WVGW E +D    GGS    F
Sbjct: 659  GIGPVSLSSDANAPD--TSFFKFEAPDNEDLFGDRPLPEWVGWGEPSDLQAAGGSTVNPF 716

Query: 345  GENGKSDVDLSGPADPIGSTSVSLSNGNVKEPNDTSSSMDSENGSVGTHTSCRAAVPSLF 166
             ++  SDV+LS  A+     + S S G    PN   S                   PSLF
Sbjct: 717  EDHDSSDVNLSSQAEAATPDASSPSGGESILPNGKKSPTS----------------PSLF 760

Query: 165  EEDVEFVGVEPEGTEKAMEQALKEGTVGEAGALKRSYTPKASEKKSEEDGE 13
            EEDVEFVGVE EGTEKAM+QALKEG VGEAG LKR+  PK  EK+  +D E
Sbjct: 761  EEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNIAPKVPEKEKSDDAE 811


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