BLASTX nr result

ID: Coptis23_contig00004541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004541
         (1980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cyto...   887   0.0  
ref|XP_002330501.1| predicted protein [Populus trichocarpa] gi|2...   855   0.0  
ref|XP_004135659.1| PREDICTED: asparagine--tRNA ligase, cytoplas...   847   0.0  
ref|XP_003630669.1| Asparaginyl-tRNA synthetase [Medicago trunca...   842   0.0  
gb|AFK33374.1| unknown [Medicago truncatula]                          838   0.0  

>ref|XP_003633115.1| PREDICTED: asparaginyl-tRNA synthetase, cytoplasmic 1-like [Vitis
            vinifera]
          Length = 571

 Score =  887 bits (2292), Expect = 0.0
 Identities = 433/544 (79%), Positives = 489/544 (89%), Gaps = 3/544 (0%)
 Frame = +3

Query: 57   SKFSSRVLIRSIVNRSDGGESVAGERMKIGGWVKTGREQGKGSFAFLEVNDGSCPTSLQV 236
            ++FS R LIR+I++R DGG  +AG+ +K+GGWVKTGREQGKGSFAFLE+NDGSCP +LQV
Sbjct: 28   AQFSDRHLIRTILSRPDGGAGLAGQTVKVGGWVKTGREQGKGSFAFLELNDGSCPANLQV 87

Query: 237  IVNSSVTCLSTLVQTGTCVYVEGVLTKTPQGTKQKVELKVDKLLHVGPVDSATYPIPKTK 416
            IV+++V  L  LVQTGTCV+VEG+L   P+GTKQ+VEL+V+K+ HVGPVD A YP+PKT+
Sbjct: 88   IVDAAVAPLGQLVQTGTCVHVEGLLKVPPEGTKQRVELRVEKVHHVGPVDPAKYPLPKTR 147

Query: 417  LTLERLRDFVHMRPRTNTISAVARIRNALAYATHTFFQMHNFLYVHTPIITTSDCEGAGE 596
            LTLE LRDFVH RPRTNTISAVARIRNALAYATHTFFQ H FLY+HTPIITTSDCEGAGE
Sbjct: 148  LTLEFLRDFVHFRPRTNTISAVARIRNALAYATHTFFQNHGFLYIHTPIITTSDCEGAGE 207

Query: 597  MFQVTALFSDADKVDKELKQKPPPSEADIEAAKKFVSEKGEAV---KSAKAKKEDITDLV 767
            MFQVT L SDA+KV+KEL + PPPSEADIEAAK  V EKGEAV   KSAKA K +IT  V
Sbjct: 208  MFQVTTLISDAEKVEKELIKNPPPSEADIEAAKALVKEKGEAVAQLKSAKASKGEITASV 267

Query: 768  TELKKAKDDLTRLEERFKLKPGLPEKDGKIDYTRDFFARQAFLTVSGQLQVETFACALSN 947
             EL KAK++L+RLEER KLKPG+P+KDGKIDY++DFFARQAFLTVSGQLQVET+ACA+S+
Sbjct: 268  AELNKAKENLSRLEERSKLKPGIPQKDGKIDYSQDFFARQAFLTVSGQLQVETYACAVSS 327

Query: 948  VYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLEDDMNCAEEYVKFLCKWLLEHCRDDM 1127
            VYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL+DDMNCAE YVKFLC+WLL++C DDM
Sbjct: 328  VYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLCQWLLDNCIDDM 387

Query: 1128 EFMVKNFDKTAIDRLEMVSSTPFERITYTRAIELLKDVDAKVKTFEKKVEWGIDLASEHE 1307
            EFM KNFDK  IDRL MV+STPFERI+YT AI+LL++   K K FE KVEWGIDLASEHE
Sbjct: 388  EFMAKNFDKGCIDRLRMVASTPFERISYTEAIKLLEEAVKKDKKFENKVEWGIDLASEHE 447

Query: 1308 RYLTEVMFKKPVIVYNYPKDFKAFYMRLNDDLRTVAAMDVLVPKVGELIGGSQREERYEV 1487
            R+LTEV+FKKPVIV++YPK  KAFYMRLNDD++TVAAMDVLVPKVGELIGGSQREERYEV
Sbjct: 448  RFLTEVLFKKPVIVHDYPKGIKAFYMRLNDDMKTVAAMDVLVPKVGELIGGSQREERYEV 507

Query: 1488 IEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMVLFATGLDNIRDVIPFPRYPG 1667
            IEKRIL+ GLPLEPYEWYLDLRRYGTVKH GFGLGFERM+LFATG+DNIRDVIPFPRYPG
Sbjct: 508  IEKRILEMGLPLEPYEWYLDLRRYGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPG 567

Query: 1668 RADL 1679
            RADL
Sbjct: 568  RADL 571


>ref|XP_002330501.1| predicted protein [Populus trichocarpa] gi|222872435|gb|EEF09566.1|
            predicted protein [Populus trichocarpa]
          Length = 568

 Score =  855 bits (2209), Expect = 0.0
 Identities = 417/560 (74%), Positives = 484/560 (86%), Gaps = 4/560 (0%)
 Frame = +3

Query: 12   AAEMSSLQVTDRIE-NSKFSSRVLIRSIVNRSDGGESVAGERMKIGGWVKTGREQGKGSF 188
            A+E++++ + D       FS RV +RSIV R DGG  +AG R++ GGWVKTGREQGKGSF
Sbjct: 9    ASELAAMAIIDGASLKHPFSDRVPVRSIVCRPDGGAGLAGNRVRAGGWVKTGREQGKGSF 68

Query: 189  AFLEVNDGSCPTSLQVIVNSSVTCLSTLVQTGTCVYVEGVLTKTPQGTKQKVELKVDKLL 368
            AFLEVNDGSCP +LQVIV++ V  LSTLVQTGTCV VEGVL   P+GTKQK+EL+V+++L
Sbjct: 69   AFLEVNDGSCPANLQVIVDAGVEDLSTLVQTGTCVSVEGVLKVPPEGTKQKIELRVERVL 128

Query: 369  HVGPVDSATYPIPKTKLTLERLRDFVHMRPRTNTISAVARIRNALAYATHTFFQMHNFLY 548
            HVGP D A YPIPKTKL+LE LRD +H+RPRTNTISAVARIRNALA+ATH+FFQ H FLY
Sbjct: 129  HVGPTDPAKYPIPKTKLSLEFLRDHIHLRPRTNTISAVARIRNALAFATHSFFQEHGFLY 188

Query: 549  VHTPIITTSDCEGAGEMFQVTALFSDADKVDKELKQKPPPSEADIEAAKKFVSEKGEAV- 725
            +HTPI+TTSDCEGAGEMFQVT L ++A+K+DKEL + PPP+EADIEAA+  V +KGE V 
Sbjct: 189  IHTPIVTTSDCEGAGEMFQVTTLINEAEKLDKELIENPPPTEADIEAARLTVMQKGEIVA 248

Query: 726  --KSAKAKKEDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDGKIDYTRDFFARQAFLT 899
              K+AKA ++DI+  V  LK AK++L+RLEER KLKPG+P+KDGKIDY +DFFARQAFLT
Sbjct: 249  QLKAAKATRDDISAAVAGLKIAKENLSRLEERAKLKPGIPKKDGKIDYAQDFFARQAFLT 308

Query: 900  VSGQLQVETFACALSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLEDDMNCAEEY 1079
            VSGQLQVET+ACA+++VYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADL+DDMNCAE Y
Sbjct: 309  VSGQLQVETYACAVTSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLQDDMNCAEAY 368

Query: 1080 VKFLCKWLLEHCRDDMEFMVKNFDKTAIDRLEMVSSTPFERITYTRAIELLKDVDAKVKT 1259
            VK++C+WLL+ C DDME M K +DK  IDRL MVSSTPFERI+YT A+ LL++     K 
Sbjct: 369  VKYMCQWLLDKCFDDMELMAKLYDKGCIDRLRMVSSTPFERISYTEAVRLLEEAVRGGKE 428

Query: 1260 FEKKVEWGIDLASEHERYLTEVMFKKPVIVYNYPKDFKAFYMRLNDDLRTVAAMDVLVPK 1439
            FEK VEWGIDLASEHERYLTE +FKKPVIVYNYPK  KAFYMRLNDD +TVAAMD+LVPK
Sbjct: 429  FEKNVEWGIDLASEHERYLTEEIFKKPVIVYNYPKGIKAFYMRLNDDSKTVAAMDILVPK 488

Query: 1440 VGELIGGSQREERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMVLFAT 1619
            VGELIGGSQREERYEVI++RI + GLPLEPY+WYLDLRRYGTVKH GFGLGFERM+LFAT
Sbjct: 489  VGELIGGSQREERYEVIQQRIAEMGLPLEPYDWYLDLRRYGTVKHCGFGLGFERMILFAT 548

Query: 1620 GLDNIRDVIPFPRYPGRADL 1679
            G+DNIRDVIPFPRYPGRADL
Sbjct: 549  GIDNIRDVIPFPRYPGRADL 568


>ref|XP_004135659.1| PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Cucumis
            sativus] gi|449485808|ref|XP_004157279.1| PREDICTED:
            asparagine--tRNA ligase, cytoplasmic 1-like [Cucumis
            sativus]
          Length = 572

 Score =  847 bits (2189), Expect = 0.0
 Identities = 407/544 (74%), Positives = 475/544 (87%), Gaps = 3/544 (0%)
 Frame = +3

Query: 57   SKFSSRVLIRSIVNRSDGGESVAGERMKIGGWVKTGREQGKGSFAFLEVNDGSCPTSLQV 236
            ++FS RV IR+IV+R DGG  +AG+++++GGWVKTGR+  K +FAFLE+NDGSCP +LQV
Sbjct: 29   AEFSDRVTIRTIVSRPDGGAGLAGQKVRVGGWVKTGRKADKDAFAFLELNDGSCPQNLQV 88

Query: 237  IVNSSVTCLSTLVQTGTCVYVEGVLTKTPQGTKQKVELKVDKLLHVGPVDSATYPIPKTK 416
            I+ +SV  L  +V TGTCV V+GV    P G  QKVEL+ D ++HVGPVD A YP+PKTK
Sbjct: 89   IIEASVADLGQIVPTGTCVVVDGVFKLPPPGKHQKVELRADAVVHVGPVDPARYPLPKTK 148

Query: 417  LTLERLRDFVHMRPRTNTISAVARIRNALAYATHTFFQMHNFLYVHTPIITTSDCEGAGE 596
            LTLE LRD VH+RPRTNTISAVARIRNALAYATHTFF  H FLY+HTPI+TTSDCEGAGE
Sbjct: 149  LTLEFLRDVVHLRPRTNTISAVARIRNALAYATHTFFNNHGFLYIHTPIVTTSDCEGAGE 208

Query: 597  MFQVTALFSDADKVDKELKQKPPPSEADIEAAKKFVSEKGEAV---KSAKAKKEDITDLV 767
            MFQVT L S+A++++KEL + PPPSEA+++ A+K V EKGEAV   K+AKA KE+I   V
Sbjct: 209  MFQVTTLLSEAERLEKELIKNPPPSEAEVDEARKIVKEKGEAVASLKAAKASKEEIGASV 268

Query: 768  TELKKAKDDLTRLEERFKLKPGLPEKDGKIDYTRDFFARQAFLTVSGQLQVETFACALSN 947
             ELKKAK+++ RLEER KLKPG+PEKDGK+DYT+DFFARQAFLTVSGQLQVET+ACALS+
Sbjct: 269  LELKKAKENVARLEERAKLKPGIPEKDGKVDYTKDFFARQAFLTVSGQLQVETYACALSS 328

Query: 948  VYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLEDDMNCAEEYVKFLCKWLLEHCRDDM 1127
            VYTFGPTFRAE+SHTSRHLAEFWMVEPEIAFADL+DDMNCAE YV+F+C+WLL++C DDM
Sbjct: 329  VYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLQDDMNCAEAYVRFMCQWLLDNCIDDM 388

Query: 1128 EFMVKNFDKTAIDRLEMVSSTPFERITYTRAIELLKDVDAKVKTFEKKVEWGIDLASEHE 1307
            +FM + +D+T IDRL+MVSSTPF R++YT A+ELL++   K K FE KVEWGIDLASEHE
Sbjct: 389  KFMAEKYDRTCIDRLKMVSSTPFVRVSYTEAVELLEEAVKKGKEFENKVEWGIDLASEHE 448

Query: 1308 RYLTEVMFKKPVIVYNYPKDFKAFYMRLNDDLRTVAAMDVLVPKVGELIGGSQREERYEV 1487
            RYLTEV+FKKPVIVYNYPK  KAFYMRLNDD++TVAAMDVLVPKVGELIGGSQREERYEV
Sbjct: 449  RYLTEVVFKKPVIVYNYPKGIKAFYMRLNDDMKTVAAMDVLVPKVGELIGGSQREERYEV 508

Query: 1488 IEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMVLFATGLDNIRDVIPFPRYPG 1667
            I  RI + GLPLEPYEWYLDLRRYGTVKH GFGLGFERM+LFATG+DNIRDVIPFPRYPG
Sbjct: 509  IRDRIKEMGLPLEPYEWYLDLRRYGTVKHCGFGLGFERMLLFATGIDNIRDVIPFPRYPG 568

Query: 1668 RADL 1679
            RADL
Sbjct: 569  RADL 572


>ref|XP_003630669.1| Asparaginyl-tRNA synthetase [Medicago truncatula]
            gi|355524691|gb|AET05145.1| Asparaginyl-tRNA synthetase
            [Medicago truncatula]
          Length = 551

 Score =  842 bits (2176), Expect = 0.0
 Identities = 404/551 (73%), Positives = 478/551 (86%), Gaps = 3/551 (0%)
 Frame = +3

Query: 36   VTDRIENSKFSSRVLIRSIVNRSDGGESVAGERMKIGGWVKTGREQGKGSFAFLEVNDGS 215
            ++D +  ++FS  VLI+SI+ R DGG  +AG++ +IGGWVKTGR+  K +FAFLE+NDGS
Sbjct: 1    MSDEVPKAEFSDSVLIKSIIRREDGGSGLAGKKARIGGWVKTGRKADKDAFAFLELNDGS 60

Query: 216  CPTSLQVIVNSSVTCLSTLVQTGTCVYVEGVLTKTPQGTKQKVELKVDKLLHVGPVDSAT 395
            C  +LQVI+++S+  L  LVQTGTCV VEG L   P G KQK+EL+ +++LHVGPVD A 
Sbjct: 61   CAGNLQVIIDASLADLGQLVQTGTCVVVEGHLKLPPSGAKQKIELRAEEVLHVGPVDPAK 120

Query: 396  YPIPKTKLTLERLRDFVHMRPRTNTISAVARIRNALAYATHTFFQMHNFLYVHTPIITTS 575
            YP+PKT+LTLE LRDFVH+R RTNTISAVARIRNALAYATHTFF  H FLYVHTPI+TTS
Sbjct: 121  YPLPKTRLTLESLRDFVHLRSRTNTISAVARIRNALAYATHTFFNKHGFLYVHTPIVTTS 180

Query: 576  DCEGAGEMFQVTALFSDADKVDKELKQKPPPSEADIEAAKKFVSEKGEAV---KSAKAKK 746
            DCEGAGEMFQVT LFS+A++++KEL Q PPP+EAD+EAAK  V EKGE V   KSAKA K
Sbjct: 181  DCEGAGEMFQVTTLFSEAERLEKELIQNPPPTEADVEAAKLVVQEKGEVVSQLKSAKADK 240

Query: 747  EDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDGKIDYTRDFFARQAFLTVSGQLQVET 926
            ++I+  V ELKKAK+++++LEER KL+PG+P KDGK+DYT+DFFARQAFLTVSGQLQVE+
Sbjct: 241  KEISAAVAELKKAKENVSKLEERSKLQPGIPRKDGKVDYTKDFFARQAFLTVSGQLQVES 300

Query: 927  FACALSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLEDDMNCAEEYVKFLCKWLL 1106
            +ACALS VYTFGPTFRAE+SHTSRHLAEFWMVEPEIAFADLEDDM CAE YVKFLC+WLL
Sbjct: 301  YACALSRVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFADLEDDMKCAEAYVKFLCRWLL 360

Query: 1107 EHCRDDMEFMVKNFDKTAIDRLEMVSSTPFERITYTRAIELLKDVDAKVKTFEKKVEWGI 1286
            ++C +DMEFM   FDK  IDRL+MV+STPF R+TYT A+E+L++     K FEK+VEWGI
Sbjct: 361  DNCLEDMEFMADKFDKGCIDRLKMVASTPFIRLTYTEAVEILEESVQNGKKFEKEVEWGI 420

Query: 1287 DLASEHERYLTEVMFKKPVIVYNYPKDFKAFYMRLNDDLRTVAAMDVLVPKVGELIGGSQ 1466
            DLASEHERYLTEV ++KPVIVYNYPKD KAFYMRLNDDL TVAAMDVLVPKVGELIGGSQ
Sbjct: 421  DLASEHERYLTEVKYQKPVIVYNYPKDIKAFYMRLNDDLETVAAMDVLVPKVGELIGGSQ 480

Query: 1467 REERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMVLFATGLDNIRDVI 1646
            REERY+VI++R+ +  LP+EPYEWY+DLRRYGTVKH+GFGLGFERM+LFATGL+NIRDVI
Sbjct: 481  REERYDVIQQRLEEMDLPVEPYEWYIDLRRYGTVKHAGFGLGFERMILFATGLENIRDVI 540

Query: 1647 PFPRYPGRADL 1679
            PFPRYPGRADL
Sbjct: 541  PFPRYPGRADL 551


>gb|AFK33374.1| unknown [Medicago truncatula]
          Length = 551

 Score =  838 bits (2165), Expect = 0.0
 Identities = 402/551 (72%), Positives = 477/551 (86%), Gaps = 3/551 (0%)
 Frame = +3

Query: 36   VTDRIENSKFSSRVLIRSIVNRSDGGESVAGERMKIGGWVKTGREQGKGSFAFLEVNDGS 215
            ++D +  ++FS  VLI+SI+ R DGG  +AG++ +IGGWVKTGR+  K +FAFLE+NDGS
Sbjct: 1    MSDEVPKAEFSDSVLIKSIIRREDGGSGLAGKKARIGGWVKTGRKADKDAFAFLELNDGS 60

Query: 216  CPTSLQVIVNSSVTCLSTLVQTGTCVYVEGVLTKTPQGTKQKVELKVDKLLHVGPVDSAT 395
            C  +LQVI+++S+  L  LVQTGTCV VEG L   P G KQK+EL+ +++LHVGPVD A 
Sbjct: 61   CAGNLQVIIDASLADLGQLVQTGTCVVVEGHLKLPPSGAKQKIELRAEEVLHVGPVDPAK 120

Query: 396  YPIPKTKLTLERLRDFVHMRPRTNTISAVARIRNALAYATHTFFQMHNFLYVHTPIITTS 575
            YP+PKT+LTLE LRDFVH+R RTNTISAVARIRNALAYATHTFF  H FLYVHTPI+TTS
Sbjct: 121  YPLPKTRLTLESLRDFVHLRSRTNTISAVARIRNALAYATHTFFNKHGFLYVHTPIVTTS 180

Query: 576  DCEGAGEMFQVTALFSDADKVDKELKQKPPPSEADIEAAKKFVSEKGEAV---KSAKAKK 746
            DCEGAGEMFQVT LFS+A++++KEL Q PPP+EAD+EAAK  V EKGE V   KSAKA K
Sbjct: 181  DCEGAGEMFQVTTLFSEAERLEKELIQNPPPTEADVEAAKLVVQEKGEVVSQLKSAKADK 240

Query: 747  EDITDLVTELKKAKDDLTRLEERFKLKPGLPEKDGKIDYTRDFFARQAFLTVSGQLQVET 926
            ++I+  V ELKKAK+++++LEER KL+PG+P KDGK+DYT+DFFARQAFLTVSGQLQVE+
Sbjct: 241  KEISAAVAELKKAKENVSKLEERSKLQPGIPRKDGKVDYTKDFFARQAFLTVSGQLQVES 300

Query: 927  FACALSNVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLEDDMNCAEEYVKFLCKWLL 1106
            +ACALS VYTFGPTFRAE+SHTSRHLAEFW+VEPEIAFADLEDDM CAE YVKFLC+WLL
Sbjct: 301  YACALSRVYTFGPTFRAENSHTSRHLAEFWVVEPEIAFADLEDDMKCAEAYVKFLCRWLL 360

Query: 1107 EHCRDDMEFMVKNFDKTAIDRLEMVSSTPFERITYTRAIELLKDVDAKVKTFEKKVEWGI 1286
            ++C +DMEFM   FDK  IDRL+MV+STPF R+TYT A+E+L++     K FEK+VEWGI
Sbjct: 361  DNCLEDMEFMADKFDKGCIDRLKMVASTPFIRLTYTEAVEILEESVQNGKKFEKEVEWGI 420

Query: 1287 DLASEHERYLTEVMFKKPVIVYNYPKDFKAFYMRLNDDLRTVAAMDVLVPKVGELIGGSQ 1466
            DLAS HERYLTEV ++KPVIVYNYPKD KAFYMRLNDDL TVAAMDVLVPKVGELIGGSQ
Sbjct: 421  DLASGHERYLTEVKYQKPVIVYNYPKDIKAFYMRLNDDLETVAAMDVLVPKVGELIGGSQ 480

Query: 1467 REERYEVIEKRILDSGLPLEPYEWYLDLRRYGTVKHSGFGLGFERMVLFATGLDNIRDVI 1646
            REERY+VI++R+ +  LP+EPYEWY+DLRRYGTVKH+GFGLGFERM+LFATGL+NIRDVI
Sbjct: 481  REERYDVIQQRLEEMDLPVEPYEWYIDLRRYGTVKHAGFGLGFERMILFATGLENIRDVI 540

Query: 1647 PFPRYPGRADL 1679
            PFPRYPGRADL
Sbjct: 541  PFPRYPGRADL 551


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