BLASTX nr result

ID: Coptis23_contig00004523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004523
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257...   144   2e-32
emb|CBI26282.3| unnamed protein product [Vitis vinifera]              141   2e-31
ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852...   139   8e-31
ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30
ref|XP_003535646.1| PREDICTED: non-specific lipid-transfer prote...   129   6e-28

>ref|XP_002278974.1| PREDICTED: uncharacterized protein LOC100257872 [Vitis vinifera]
          Length = 217

 Score =  144 bits (364), Expect = 2e-32
 Identities = 67/99 (67%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
 Frame = -3

Query: 689 LAVLFVPAYGQSSTSCTASMVNSFAPCMNFITN--GTTTSPTPACCNSLQSLTSASTDCA 516
           L V+ +P  GQ STSC+ASM++SF PC+NF+TN  G  TSPT  CCN+L+SLTS S DC 
Sbjct: 18  LMVVIMPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTSMDCL 77

Query: 515 CLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 399
           CLI+TG+VPFQ+PINRTLA+SLPRACN +SVP+QCKA G
Sbjct: 78  CLIVTGSVPFQMPINRTLAISLPRACNTASVPVQCKATG 116


>emb|CBI26282.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  141 bits (356), Expect = 2e-31
 Identities = 65/94 (69%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
 Frame = -3

Query: 674 VPAYGQSSTSCTASMVNSFAPCMNFITN--GTTTSPTPACCNSLQSLTSASTDCACLILT 501
           +P  GQ STSC+ASM++SF PC+NF+TN  G  TSPT  CCN+L+SLTS S DC CLI+T
Sbjct: 1   MPVQGQISTSCSASMISSFTPCINFVTNSSGNGTSPTADCCNALRSLTSTSMDCLCLIVT 60

Query: 500 GNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 399
           G+VPFQ+PINRTLA+SLPRACN +SVP+QCKA G
Sbjct: 61  GSVPFQMPINRTLAISLPRACNTASVPVQCKATG 94


>ref|XP_003632315.1| PREDICTED: uncharacterized protein LOC100852532 [Vitis vinifera]
          Length = 214

 Score =  139 bits (350), Expect = 8e-31
 Identities = 69/119 (57%), Positives = 87/119 (73%), Gaps = 3/119 (2%)
 Frame = -3

Query: 746 MEGFSFKFVAHIMILTLWVLAVLFVPAYGQSSTSCTASMVNSFAPCMNFITNGTT---TS 576
           MEG   K   H++ +   +LA+  + A  Q ST CT SM++SF PC+NFIT  T+   +S
Sbjct: 1   MEGL--KAFQHMVAVYTTLLAISVISANAQISTPCTTSMISSFTPCLNFITGSTSGNGSS 58

Query: 575 PTPACCNSLQSLTSASTDCACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 399
           PT  CC+SL+SLTS + DCACLI+TG+VP QLPINRTLA+SLPRACN  SVP+QCKA G
Sbjct: 59  PTAGCCSSLRSLTSTTMDCACLIITGSVPLQLPINRTLAISLPRACNMGSVPIQCKASG 117


>ref|XP_002315761.1| predicted protein [Populus trichocarpa] gi|222864801|gb|EEF01932.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score =  135 bits (341), Expect = 9e-30
 Identities = 62/100 (62%), Positives = 78/100 (78%), Gaps = 3/100 (3%)
 Frame = -3

Query: 689 LAVLFVPAYGQSSTSCTASMVNSFAPCMNFITNGTT---TSPTPACCNSLQSLTSASTDC 519
           LAV+ +P YGQ +T+CTAS++ +F PCMNF+TN T    TSPT  CC +L++LTS   DC
Sbjct: 9   LAVMILPVYGQINTACTASVLATFTPCMNFLTNSTAANGTSPTAGCCGALKNLTSNGMDC 68

Query: 518 ACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 399
            CLI+TG+VPF +PINRTLA+SLPRACN   VP+QCKA G
Sbjct: 69  FCLIVTGSVPFSIPINRTLAISLPRACNMPGVPVQCKATG 108


>ref|XP_003535646.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Glycine max]
          Length = 227

 Score =  129 bits (325), Expect = 6e-28
 Identities = 61/101 (60%), Positives = 78/101 (77%), Gaps = 3/101 (2%)
 Frame = -3

Query: 692 VLAVLFVPAYGQSSTSCTASMVNSF-APCMNFITN--GTTTSPTPACCNSLQSLTSASTD 522
           V  V+  P+YGQ ST C AS++ +F  PCMNF+TN  G  TSPT  CC++L+SLTS   D
Sbjct: 17  VAMVMGAPSYGQISTPCNASILGTFFTPCMNFLTNSSGNGTSPTTECCSALKSLTSGGMD 76

Query: 521 CACLILTGNVPFQLPINRTLAVSLPRACNGSSVPLQCKALG 399
           C CLI+TG+VPF++P+NRTLA+SLPRACN + VP+QCKA G
Sbjct: 77  CLCLIVTGSVPFRIPVNRTLAISLPRACNMAGVPVQCKASG 117


Top