BLASTX nr result

ID: Coptis23_contig00004516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004516
         (1523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284432.1| PREDICTED: uncharacterized protein LOC100245...   694   0.0  
emb|CBI19046.3| unnamed protein product [Vitis vinifera]              686   0.0  
gb|AET06147.1| PLP-dependent aminotransferase [Papaver somniferum]    681   0.0  
ref|XP_002513782.1| Aminotransferase ybdL, putative [Ricinus com...   670   0.0  
ref|XP_002306622.1| predicted protein [Populus trichocarpa] gi|2...   669   0.0  

>ref|XP_002284432.1| PREDICTED: uncharacterized protein LOC100245359 [Vitis vinifera]
          Length = 911

 Score =  694 bits (1792), Expect = 0.0
 Identities = 346/428 (80%), Positives = 377/428 (88%)
 Frame = -2

Query: 1408 RPTLLFTPFEKSHSICSKTSKYPSIMXXXXXXXXXXTDNENGVSNPPQYPLQVAKRLEKF 1229
            RP  L    +   S    +SKYPS M          T+ E    NPPQ PLQVAKRLEKF
Sbjct: 17   RPAFLRRSIDSISSRSRSSSKYPSFMASASTVSAPNTEAEQ-THNPPQ-PLQVAKRLEKF 74

Query: 1228 KTTIFTQMSMLAVKHGAINLGQGFPNFDGPEFVXXXXXXXXXEGKNQYARGYGVPDLNTA 1049
            KTTIFTQMSMLA+KHGAINLGQGFPNFDGPEFV         +GKNQYARGYGVPDLN+A
Sbjct: 75   KTTIFTQMSMLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIKDGKNQYARGYGVPDLNSA 134

Query: 1048 VAARFKKDSGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMA 869
            VA RFKKD+GLVVDPEKEVTVTSGCTEAIAAT+LGLINPGDEVILFAPFYDSYEATLSMA
Sbjct: 135  VADRFKKDTGLVVDPEKEVTVTSGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMA 194

Query: 868  GAKIKSITLRPPDFSIPIDELRNAVSKNTRAVLMNTPHNPTGKMFTREEMDILASLCIEN 689
            GA+IKSITLRPPDF++P+DEL++A+SKNTRA+L+NTPHNPTGKMFTREE++++ASLCIEN
Sbjct: 195  GAQIKSITLRPPDFAVPMDELKSAISKNTRAILINTPHNPTGKMFTREELNVIASLCIEN 254

Query: 688  DVLVFSDEVYDKLAFEADHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTW 509
            DVLVF+DEVYDKLAFE DHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW +APPHLTW
Sbjct: 255  DVLVFTDEVYDKLAFEMDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWTVAPPHLTW 314

Query: 508  GVRQAHSYLTFATSTPMQSAAATALRAPDSYYEELKKDYEAKKAILVEGLKTVGFVVYPS 329
            GVRQAHS+LTFAT TPMQ AAATALRAPDSYYEELK+DY AKKAILVEGLK VGF VYPS
Sbjct: 315  GVRQAHSFLTFATCTPMQWAAATALRAPDSYYEELKRDYSAKKAILVEGLKAVGFRVYPS 374

Query: 328  SGTYFVIADHTPFGLNNDVAFCEYLIQEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEET 149
            SGTYFV+ DHTPFGL +D+AFCEYLI+EVGVVAIPTSVFYL+PEDGKNLVRFTFCKDE T
Sbjct: 375  SGTYFVVVDHTPFGLKDDIAFCEYLIKEVGVVAIPTSVFYLHPEDGKNLVRFTFCKDEGT 434

Query: 148  LREAVKRM 125
            LR AV+RM
Sbjct: 435  LRAAVERM 442


>emb|CBI19046.3| unnamed protein product [Vitis vinifera]
          Length = 409

 Score =  686 bits (1769), Expect = 0.0
 Identities = 334/384 (86%), Positives = 362/384 (94%)
 Frame = -2

Query: 1276 NPPQYPLQVAKRLEKFKTTIFTQMSMLAVKHGAINLGQGFPNFDGPEFVXXXXXXXXXEG 1097
            NPPQ PLQVAKRLEKFKTTIFTQMSMLA+KHGAINLGQGFPNFDGPEFV         +G
Sbjct: 19   NPPQ-PLQVAKRLEKFKTTIFTQMSMLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIKDG 77

Query: 1096 KNQYARGYGVPDLNTAVAARFKKDSGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVI 917
            KNQYARGYGVPDLN+AVA RFKKD+GLVVDPEKEVTVTSGCTEAIAAT+LGLINPGDEVI
Sbjct: 78   KNQYARGYGVPDLNSAVADRFKKDTGLVVDPEKEVTVTSGCTEAIAATMLGLINPGDEVI 137

Query: 916  LFAPFYDSYEATLSMAGAKIKSITLRPPDFSIPIDELRNAVSKNTRAVLMNTPHNPTGKM 737
            LFAPFYDSYEATLSMAGA+IKSITLRPPDF++P+DEL++A+SKNTRA+L+NTPHNPTGKM
Sbjct: 138  LFAPFYDSYEATLSMAGAQIKSITLRPPDFAVPMDELKSAISKNTRAILINTPHNPTGKM 197

Query: 736  FTREEMDILASLCIENDVLVFSDEVYDKLAFEADHISMASLPGMYERTVTMNSLGKTFSL 557
            FTREE++++ASLCIENDVLVF+DEVYDKLAFE DHISMASLPGMYERTVTMNSLGKTFSL
Sbjct: 198  FTREELNVIASLCIENDVLVFTDEVYDKLAFEMDHISMASLPGMYERTVTMNSLGKTFSL 257

Query: 556  TGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQSAAATALRAPDSYYEELKKDYEAKKA 377
            TGWKIGW +APPHLTWGVRQAHS+LTFAT TPMQ AAATALRAPDSYYEELK+DY AKKA
Sbjct: 258  TGWKIGWTVAPPHLTWGVRQAHSFLTFATCTPMQWAAATALRAPDSYYEELKRDYSAKKA 317

Query: 376  ILVEGLKTVGFVVYPSSGTYFVIADHTPFGLNNDVAFCEYLIQEVGVVAIPTSVFYLNPE 197
            ILVEGLK VGF VYPSSGTYFV+ DHTPFGL +D+AFCEYLI+EVGVVAIPTSVFYL+PE
Sbjct: 318  ILVEGLKAVGFRVYPSSGTYFVVVDHTPFGLKDDIAFCEYLIKEVGVVAIPTSVFYLHPE 377

Query: 196  DGKNLVRFTFCKDEETLREAVKRM 125
            DGKNLVRFTFCKDE TLR AV+RM
Sbjct: 378  DGKNLVRFTFCKDEGTLRAAVERM 401


>gb|AET06147.1| PLP-dependent aminotransferase [Papaver somniferum]
          Length = 453

 Score =  681 bits (1756), Expect = 0.0
 Identities = 349/456 (76%), Positives = 384/456 (84%), Gaps = 2/456 (0%)
 Frame = -2

Query: 1486 LLSLTIPSSTCGP-NEMLKTHLINLRIRPTLLFT-PFEKSHSICSKTSKYPSIMXXXXXX 1313
            +L L  PSS     NEML      LR R   +FT P   + +   + S++PS M      
Sbjct: 1    MLGLVKPSSNFRHGNEML-----TLRTRALNIFTIPTTTTLNHSFRKSRFPSFMASAIST 55

Query: 1312 XXXXTDNENGVSNPPQYPLQVAKRLEKFKTTIFTQMSMLAVKHGAINLGQGFPNFDGPEF 1133
                   +N V    Q+P+QVAKRLEKFKTTIFTQMS+LA+KHGAINLGQGFPNFDGPEF
Sbjct: 56   TSEEPTTKNVV----QHPVQVAKRLEKFKTTIFTQMSILAIKHGAINLGQGFPNFDGPEF 111

Query: 1132 VXXXXXXXXXEGKNQYARGYGVPDLNTAVAARFKKDSGLVVDPEKEVTVTSGCTEAIAAT 953
            V         EGKNQYARGYGVPDLN+AVAARFKKDSGLVVDPEKEVT+TSGCTEAIAAT
Sbjct: 112  VKDAAIQAIKEGKNQYARGYGVPDLNSAVAARFKKDSGLVVDPEKEVTITSGCTEAIAAT 171

Query: 952  ILGLINPGDEVILFAPFYDSYEATLSMAGAKIKSITLRPPDFSIPIDELRNAVSKNTRAV 773
            +LGLINPGDEVILFAPFYDSYEATLSMAGA IKSITLRPP+FS+PIDE ++ +SKNTRA+
Sbjct: 172  MLGLINPGDEVILFAPFYDSYEATLSMAGANIKSITLRPPNFSVPIDEFKSIISKNTRAI 231

Query: 772  LMNTPHNPTGKMFTREEMDILASLCIENDVLVFSDEVYDKLAFEADHISMASLPGMYERT 593
            L+NTPHNPTGKMF+REE++ +ASLCIENDVLVFSDEVYDKLAFE DHIS+ASLPGMYERT
Sbjct: 232  LLNTPHNPTGKMFSREELETIASLCIENDVLVFSDEVYDKLAFEEDHISIASLPGMYERT 291

Query: 592  VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQSAAATALRAPDSYY 413
            VTMNSLGKTFS+TGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQ AAA ALR  ++YY
Sbjct: 292  VTMNSLGKTFSVTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQFAAAEALRTSETYY 351

Query: 412  EELKKDYEAKKAILVEGLKTVGFVVYPSSGTYFVIADHTPFGLNNDVAFCEYLIQEVGVV 233
            EE+KKDY  KK ILVEGLK VGFVV+PSSGTYFVI DHTPFG  NDVAFCEYLI+EVGVV
Sbjct: 352  EEMKKDYMHKKEILVEGLKDVGFVVHPSSGTYFVIVDHTPFGFENDVAFCEYLIKEVGVV 411

Query: 232  AIPTSVFYLNPEDGKNLVRFTFCKDEETLREAVKRM 125
            AIPTSVFYLNPEDGKNLVRFTFCKDE+TLR AV+RM
Sbjct: 412  AIPTSVFYLNPEDGKNLVRFTFCKDEDTLRAAVERM 447


>ref|XP_002513782.1| Aminotransferase ybdL, putative [Ricinus communis]
            gi|223546868|gb|EEF48365.1| Aminotransferase ybdL,
            putative [Ricinus communis]
          Length = 462

 Score =  670 bits (1728), Expect = 0.0
 Identities = 329/415 (79%), Positives = 363/415 (87%), Gaps = 3/415 (0%)
 Frame = -2

Query: 1360 SKTSKYPSIMXXXXXXXXXXTD---NENGVSNPPQYPLQVAKRLEKFKTTIFTQMSMLAV 1190
            S  S YPS+M           D    +N  +   Q PLQVAKRLEKFKTTIFTQMS LA+
Sbjct: 41   SPISNYPSLMATFSTASTTEKDAPSGQNDSTQKSQQPLQVAKRLEKFKTTIFTQMSSLAI 100

Query: 1189 KHGAINLGQGFPNFDGPEFVXXXXXXXXXEGKNQYARGYGVPDLNTAVAARFKKDSGLVV 1010
            KHGAINLGQGFPNFDGPEFV         +GKNQYARGYGVPD N+A+  RFKKD+GLVV
Sbjct: 101  KHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDFNSAIVDRFKKDTGLVV 160

Query: 1009 DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKSITLRPPD 830
            DPEKEVTVTSGCTEAIAATILGLI+PGDEVILFAPFYDSYEATLSMAGAKIK +TL+PPD
Sbjct: 161  DPEKEVTVTSGCTEAIAATILGLIDPGDEVILFAPFYDSYEATLSMAGAKIKCVTLQPPD 220

Query: 829  FSIPIDELRNAVSKNTRAVLMNTPHNPTGKMFTREEMDILASLCIENDVLVFSDEVYDKL 650
            F++PIDEL++ +SKNTRA+L+NTPHNPTGKMFTREE+  +AS CIENDVLVF+DEVYDKL
Sbjct: 221  FAVPIDELKSIISKNTRAILINTPHNPTGKMFTREELTTIASCCIENDVLVFTDEVYDKL 280

Query: 649  AFEADHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTFAT 470
            AFE DHISMASLPGMYERTVT+NSLGKTFSLTGWKIGWAIAPPHLTWGVRQAH++LTFAT
Sbjct: 281  AFEMDHISMASLPGMYERTVTLNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHAFLTFAT 340

Query: 469  STPMQSAAATALRAPDSYYEELKKDYEAKKAILVEGLKTVGFVVYPSSGTYFVIADHTPF 290
            STPMQ AA+ ALRAPDSY+EELK+DY AKKAILVEGLK VGF V+PSSGTYFV+ DHTPF
Sbjct: 341  STPMQWAASVALRAPDSYFEELKRDYMAKKAILVEGLKAVGFKVFPSSGTYFVVVDHTPF 400

Query: 289  GLNNDVAFCEYLIQEVGVVAIPTSVFYLNPEDGKNLVRFTFCKDEETLREAVKRM 125
            GL ND+AFCE+LI+EVGVVAIPTSVFYLNPE+GKNLVRFTFCKDE TLR AV+RM
Sbjct: 401  GLENDIAFCEHLIKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRTAVERM 455


>ref|XP_002306622.1| predicted protein [Populus trichocarpa] gi|222856071|gb|EEE93618.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  669 bits (1726), Expect = 0.0
 Identities = 325/389 (83%), Positives = 356/389 (91%)
 Frame = -2

Query: 1291 ENGVSNPPQYPLQVAKRLEKFKTTIFTQMSMLAVKHGAINLGQGFPNFDGPEFVXXXXXX 1112
            +N  +   Q PLQVAKRLEKFKTTIFTQMS LA+K+GAINLGQGFPNFDGPEFV      
Sbjct: 18   QNDSTRKTQQPLQVAKRLEKFKTTIFTQMSSLAIKYGAINLGQGFPNFDGPEFVKEAAIQ 77

Query: 1111 XXXEGKNQYARGYGVPDLNTAVAARFKKDSGLVVDPEKEVTVTSGCTEAIAATILGLINP 932
               +GKNQYARGYGVPDLN+A+A RFKKD+GLVVDP+KE+TVTSGCTEAIAATILGLINP
Sbjct: 78   AIKDGKNQYARGYGVPDLNSAIAERFKKDTGLVVDPDKEITVTSGCTEAIAATILGLINP 137

Query: 931  GDEVILFAPFYDSYEATLSMAGAKIKSITLRPPDFSIPIDELRNAVSKNTRAVLMNTPHN 752
            GDEVI+FAPFYDSYEATLSMAGAKIK ITL PP FS+PIDEL++A++KNTRA+L+NTPHN
Sbjct: 138  GDEVIVFAPFYDSYEATLSMAGAKIKGITLCPPAFSVPIDELKSAITKNTRAILINTPHN 197

Query: 751  PTGKMFTREEMDILASLCIENDVLVFSDEVYDKLAFEADHISMASLPGMYERTVTMNSLG 572
            PTGKMFTREE+  +ASLCIENDVLVF+DEVYDKLAFE DHISMASLPGMYERTVT+NSLG
Sbjct: 198  PTGKMFTREELSTIASLCIENDVLVFTDEVYDKLAFETDHISMASLPGMYERTVTLNSLG 257

Query: 571  KTFSLTGWKIGWAIAPPHLTWGVRQAHSYLTFATSTPMQSAAATALRAPDSYYEELKKDY 392
            KTFSLTGWKIGWAIAPPHLTWGVRQAHS+LTFATSTPMQ AAA ALRAP+SYY ELK+DY
Sbjct: 258  KTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATSTPMQWAAAVALRAPESYYVELKRDY 317

Query: 391  EAKKAILVEGLKTVGFVVYPSSGTYFVIADHTPFGLNNDVAFCEYLIQEVGVVAIPTSVF 212
             AKK ILVEGLK VGF V+PSSGTYFV+ DHTPFGL ND+AFCEYLI+EVGVVAIPTSVF
Sbjct: 318  MAKKEILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDIAFCEYLIKEVGVVAIPTSVF 377

Query: 211  YLNPEDGKNLVRFTFCKDEETLREAVKRM 125
            YLNPEDGKNLVRFTFCKDEETL+ AV+RM
Sbjct: 378  YLNPEDGKNLVRFTFCKDEETLKAAVERM 406


Top