BLASTX nr result
ID: Coptis23_contig00004514
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00004514
(2011 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529559.1| zinc finger protein, putative [Ricinus commu... 784 0.0
gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron... 774 0.0
gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron... 771 0.0
ref|XP_002512671.1| zinc finger protein, putative [Ricinus commu... 745 0.0
ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 727 0.0
>ref|XP_002529559.1| zinc finger protein, putative [Ricinus communis]
gi|223530971|gb|EEF32828.1| zinc finger protein, putative
[Ricinus communis]
Length = 752
Score = 784 bits (2024), Expect = 0.0
Identities = 393/610 (64%), Positives = 456/610 (74%), Gaps = 21/610 (3%)
Frame = -2
Query: 2010 FNCSFCMQLPERPVTTPCGHNFCLKCFKKWMGQGGNTCAKCRSRIPQKMASQPRINASLI 1831
F C+FCMQLPERPVTTPCGHNFCLKCF++W+GQ TCAKCRS IP KMASQPRIN+SL+
Sbjct: 144 FKCAFCMQLPERPVTTPCGHNFCLKCFQRWIGQRKLTCAKCRSAIPPKMASQPRINSSLV 203
Query: 1830 VAIRMXXXXXXXXXXAPVKVTHFVHNQLRPDKAFTTERAKKTGKANACSGKIFVTVPNDH 1651
AIRM KV HFVHNQ RPDKA+TTERA+++GKANACSGKIFVTVP DH
Sbjct: 204 AAIRMAKLSKSIVSGGLPKVYHFVHNQNRPDKAYTTERAQRSGKANACSGKIFVTVPPDH 263
Query: 1650 FGPIPAENDPGRNQGVLVGECWEDRMECRQWGAHFPHVSGIGGQSTHGAQSVAISGGYQD 1471
FGPIPAENDP RNQGVLVGECWEDR+ECRQWGAH PHV+GI GQS +GAQSVA+SGGY D
Sbjct: 264 FGPIPAENDPERNQGVLVGECWEDRLECRQWGAHLPHVAGIAGQSNYGAQSVALSGGYID 323
Query: 1470 DEDHGEWFLYTGSGGRDLTGNKRTNKNQSKDQTFDKSNEALRVSCKKGYPVRVVRSHKEK 1291
DEDHGEWFLYTGSGGRDL+GNKRTNK QS DQ F+K NEALR+SC+KGYPVRVVRSHKEK
Sbjct: 324 DEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFEKMNEALRLSCRKGYPVRVVRSHKEK 383
Query: 1290 RSSYAPEAGLRYDGVYRIEKCWRKVGIQGHKVCRYLFIRCDNEPAPWTSDEHGDHPRPLP 1111
RSSYAPE+G+RYDGVYRIEKCWRKVGIQGHKVCRYLF+RCDNEPAPWTSDEHGD PRPLP
Sbjct: 384 RSSYAPESGVRYDGVYRIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDEHGDRPRPLP 443
Query: 1110 VIKELKGATDLFERKESPSWDYDEEDNXXXXXXXXXXXXXPVNTVNPEDVKRARKAIKNA 931
VIKEL ATD+ ERKESPSWD+DE D PVN N ED+K +RK I+ A
Sbjct: 444 VIKELAKATDITERKESPSWDFDESDGRWKWKIPPPQSRKPVNARNSEDLKMSRKVIRKA 503
Query: 930 HNLSVREKLLKEFSCLICRKVLNLPLTTPCAHNFCKPCLEGAFAGQTFVRERTCQGRRTL 751
N SVR++LLKEFSCLICR+V+N P+TTPCAHNFCK CLEGAF G+T +RER+ +G RTL
Sbjct: 504 QNTSVRDRLLKEFSCLICRQVMNQPITTPCAHNFCKSCLEGAFTGKTLMRERS-KGGRTL 562
Query: 750 RAQKNIMKCPTCQNDISDFLKNPQVNRELLGVIESLQRKTEE--ENVEDLSGEESGGTDE 577
RAQKNIM CP C DISDFL++P+VNRE++ VIESLQR+TEE ++V+D EE+ G++E
Sbjct: 563 RAQKNIMHCPRCPTDISDFLQDPKVNREVMAVIESLQRQTEETVDSVDDSGEEEADGSEE 622
Query: 576 Q-SETAAEDGNSERQNHTEVLQNXXXXXXXXXXXXXKVNDKE-------QPDAERKSEPV 421
T A + +SE+ L+N K N+ +E S+
Sbjct: 623 NPCVTEAGEDDSEKTAAHNGLENPSKCEPEVAIEQKKENEISAGKTGCGNEHSEEASKLE 682
Query: 420 SVGTEDDEMKVDV---SIPCESKLKTEGGENTPTKVSEEVRN--------EGNDSPSSPL 274
S ED + V V + C+ K+ G E+ V + RN +GN+SPSSPL
Sbjct: 683 SEVAEDGGLNVQVPAARLSCKRKIPDSGAESREPTVGAKKRNRRGQEATADGNNSPSSPL 742
Query: 273 HVRSDGDD*E 244
+VRS DD E
Sbjct: 743 NVRSSDDDFE 752
>gb|ADR79438.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
Length = 713
Score = 774 bits (1998), Expect = 0.0
Identities = 390/600 (65%), Positives = 443/600 (73%), Gaps = 14/600 (2%)
Frame = -2
Query: 2007 NCSFCMQLPERPVTTPCGHNFCLKCFKKWMGQGGNTCAKCRSRIPQKMASQPRINASLIV 1828
NCSFCMQLPERPVTTPCGHNFCLKCF+KW+ QG TCAKCR IP KMASQPRIN++L+V
Sbjct: 140 NCSFCMQLPERPVTTPCGHNFCLKCFQKWVAQGKRTCAKCRHTIPTKMASQPRINSALVV 199
Query: 1827 AIRMXXXXXXXXXXAPVKVTHFVHNQLRPDKAFTTERAKKTGKANACSGKIFVTVPNDHF 1648
AIRM A +K FVHNQ RPDKAFTTERAK+ GKANACSGKIFVTVP DHF
Sbjct: 200 AIRMARTEKSATSGATLKPLPFVHNQNRPDKAFTTERAKRAGKANACSGKIFVTVPPDHF 259
Query: 1647 GPIPAENDPGRNQGVLVGECWEDRMECRQWGAHFPHVSGIGGQSTHGAQSVAISGGYQDD 1468
GPIPAENDP RNQGVLVGE WEDRMECRQWGAH PHV+GI GQS +GAQSVA+SGGY+DD
Sbjct: 260 GPIPAENDPERNQGVLVGESWEDRMECRQWGAHLPHVAGIAGQSDYGAQSVALSGGYEDD 319
Query: 1467 EDHGEWFLYTGSGGRDLTGNKRTNKNQSKDQTFDKSNEALRVSCKKGYPVRVVRSHKEKR 1288
EDHGEWFLYTGSGGRDL+GN+RTNK QS DQ F+K NEALRVSCKKGYPVRVVRSHKEKR
Sbjct: 320 EDHGEWFLYTGSGGRDLSGNRRTNKEQSFDQKFEKLNEALRVSCKKGYPVRVVRSHKEKR 379
Query: 1287 SSYAPEAGLRYDGVYRIEKCWRKVGIQGHKVCRYLFIRCDNEPAPWTSDEHGDHPRPLPV 1108
SSYAPE G+RYDG+YRIEKCWRKVG+QG KVCRYLF+RCDNEPAPWTSDEHGD PRPLP
Sbjct: 380 SSYAPETGVRYDGIYRIEKCWRKVGVQGFKVCRYLFVRCDNEPAPWTSDEHGDRPRPLPG 439
Query: 1107 IKELKGATDLFERKESPSWDYDE-EDNXXXXXXXXXXXXXPVNTVNPEDVKRARKAIKNA 931
IKELK TD+ ERKE P+WDY+ E + +T NPED KR RK+
Sbjct: 440 IKELKNTTDVTERKEKPAWDYEVCEGHGWKWTKPPPMSRRSSDTGNPEDRKRGRKS--TT 497
Query: 930 HNLSVREKLLKEFSCLICRKVLNLPLTTPCAHNFCKPCLEGAFAGQTFVRERTCQGRRTL 751
LSVR++LLK FSCL+C KV+ LPLTTPCAHNFCKPCLEGAFAG+ FVRERT G R+L
Sbjct: 498 QGLSVRDRLLKGFSCLLCHKVMTLPLTTPCAHNFCKPCLEGAFAGRAFVRERTRVGGRSL 557
Query: 750 RAQKNIMKCPTCQNDISDFLKNPQVNRELLGVIESLQRKTEEENVEDLSGEESGGTDEQS 571
RAQKN+MKCP+C DISDFL+NPQVNREL+ VIESL+RK+ EENVE + EE GT E+
Sbjct: 558 RAQKNVMKCPSCPTDISDFLQNPQVNRELMDVIESLKRKS-EENVEGSNEEECEGTGEKK 616
Query: 570 ETAAEDGNSERQNHTEVLQNXXXXXXXXXXXXXKVNDKEQPDAERKSEPVSVGTEDDEMK 391
A++ SE ++K+ DA+ +E VG+E+ EM
Sbjct: 617 SDNADEDTSE-----------------------GTDEKKSDDADEDTE---VGSENPEMA 650
Query: 390 VDVS-----------IPCESKLK--TEGGENTPTKVSEEVRNEGNDSPSSPLHVRSDGDD 250
S +P K + T+G + +K S G+DSPSSPLHVRS DD
Sbjct: 651 EGGSDEEVAIVQVQVLPKRKKTENSTDGKKAKKSKKSSTAEEAGDDSPSSPLHVRSSDDD 710
>gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera]
Length = 713
Score = 771 bits (1991), Expect = 0.0
Identities = 384/590 (65%), Positives = 439/590 (74%), Gaps = 4/590 (0%)
Frame = -2
Query: 2007 NCSFCMQLPERPVTTPCGHNFCLKCFKKWMGQGGNTCAKCRSRIPQKMASQPRINASLIV 1828
NCSFCMQLPERPVTTPCGHNFCLKCF+KW+ QG TCAKCR IP KMASQPRIN++L+V
Sbjct: 140 NCSFCMQLPERPVTTPCGHNFCLKCFQKWVAQGKRTCAKCRHTIPPKMASQPRINSALVV 199
Query: 1827 AIRMXXXXXXXXXXAPVKVTHFVHNQLRPDKAFTTERAKKTGKANACSGKIFVTVPNDHF 1648
AIRM A +K FVHNQ RPDKAFTTERAK+ GKANACSGKIFVTVP DHF
Sbjct: 200 AIRMARTEKSATSGATLKPLPFVHNQNRPDKAFTTERAKRAGKANACSGKIFVTVPPDHF 259
Query: 1647 GPIPAENDPGRNQGVLVGECWEDRMECRQWGAHFPHVSGIGGQSTHGAQSVAISGGYQDD 1468
GPIPAENDP RNQGVLVGE WEDRMECRQWGAH PHV+GI GQS +GAQSVA+SGGY+DD
Sbjct: 260 GPIPAENDPERNQGVLVGESWEDRMECRQWGAHLPHVAGIAGQSDYGAQSVALSGGYEDD 319
Query: 1467 EDHGEWFLYTGSGGRDLTGNKRTNKNQSKDQTFDKSNEALRVSCKKGYPVRVVRSHKEKR 1288
EDHGEWFLYTGSGGRDL+GN+RTNK QS DQ F+K NEALRVSCKKGYPVRVVRSHKEKR
Sbjct: 320 EDHGEWFLYTGSGGRDLSGNRRTNKEQSFDQKFEKLNEALRVSCKKGYPVRVVRSHKEKR 379
Query: 1287 SSYAPEAGLRYDGVYRIEKCWRKVGIQGHKVCRYLFIRCDNEPAPWTSDEHGDHPRPLPV 1108
SSYAPE G+RYDG+YRIEKCWRKVG+QG KVCRYLF+RCDNEPAPWTSDEHGD PRPLP
Sbjct: 380 SSYAPETGVRYDGIYRIEKCWRKVGVQGFKVCRYLFVRCDNEPAPWTSDEHGDRPRPLPG 439
Query: 1107 IKELKGATDLFERKESPSWDYDE-EDNXXXXXXXXXXXXXPVNTVNPEDVKRARKAIKNA 931
IKELK TD+ ERKE P+WDY+ E + +T NPED KR RK+
Sbjct: 440 IKELKNTTDVTERKEKPAWDYEVCEGHGWKWTKPPPMSRRSSDTGNPEDRKRGRKS--TT 497
Query: 930 HNLSVREKLLKEFSCLICRKVLNLPLTTPCAHNFCKPCLEGAFAGQTFVRERTCQGRRTL 751
LSVR++LLK FSCL+C KV+ LPLTTPCAHNFCKPCLEGAFAG+ FVRERT G R+L
Sbjct: 498 QGLSVRDRLLKGFSCLLCHKVMTLPLTTPCAHNFCKPCLEGAFAGRAFVRERTRVGGRSL 557
Query: 750 RAQKNIMKCPTCQNDISDFLKNPQVNRELLGVIESLQRKTEEENVEDLSGEESGGTDEQS 571
RAQKN+MKCP+C DISDFL+NPQVNREL+ VIESL+ K+ EENVE + E GTDE+
Sbjct: 558 RAQKNVMKCPSCPTDISDFLQNPQVNRELMDVIESLKCKS-EENVEGSNEEVCEGTDEKK 616
Query: 570 ETAAEDGNSERQNHTEVLQNXXXXXXXXXXXXXKVNDKEQPDAERKSEPVSVGTEDDEMK 391
A++ SE + + V D++ E G++++ K
Sbjct: 617 SDNADEDTSEGTDEKK----------------SDVADEDTEVGSENPEMAEGGSDEEVAK 660
Query: 390 VDVSI-PCESKLK--TEGGENTPTKVSEEVRNEGNDSPSSPLHVRSDGDD 250
V + + P K + T+G + +K G+DSPSSPLHVRS DD
Sbjct: 661 VQLQVLPKRKKAENSTDGKKAKKSKKCSTAEEAGDDSPSSPLHVRSSDDD 710
>ref|XP_002512671.1| zinc finger protein, putative [Ricinus communis]
gi|223548632|gb|EEF50123.1| zinc finger protein, putative
[Ricinus communis]
Length = 735
Score = 745 bits (1923), Expect = 0.0
Identities = 348/485 (71%), Positives = 394/485 (81%)
Frame = -2
Query: 2010 FNCSFCMQLPERPVTTPCGHNFCLKCFKKWMGQGGNTCAKCRSRIPQKMASQPRINASLI 1831
FNCSFCMQLP+RPVTTPCGHNFCLKCF+KW+GQG TCA CR++IP KMASQPRIN+ L+
Sbjct: 135 FNCSFCMQLPDRPVTTPCGHNFCLKCFQKWIGQGKRTCANCRNQIPSKMASQPRINSVLV 194
Query: 1830 VAIRMXXXXXXXXXXAPVKVTHFVHNQLRPDKAFTTERAKKTGKANACSGKIFVTVPNDH 1651
+AIRM P KV HFVHNQ RPDKAFT+ERAKK GK+NACSGKIFVTVP DH
Sbjct: 195 IAIRMAKMSKSSTAGGPHKVYHFVHNQNRPDKAFTSERAKKAGKSNACSGKIFVTVPPDH 254
Query: 1650 FGPIPAENDPGRNQGVLVGECWEDRMECRQWGAHFPHVSGIGGQSTHGAQSVAISGGYQD 1471
FGPI AENDP R QGVLVGE WEDR+ECRQWGAH PHV+GI GQSTHGAQSVA+SGGY D
Sbjct: 255 FGPILAENDPVREQGVLVGESWEDRLECRQWGAHLPHVAGIAGQSTHGAQSVALSGGYVD 314
Query: 1470 DEDHGEWFLYTGSGGRDLTGNKRTNKNQSKDQTFDKSNEALRVSCKKGYPVRVVRSHKEK 1291
DEDHG+WFLYTGSGGRDL+GNKRTNK QS DQ F+K NEALRVSC+KGYP+RVVRSHKEK
Sbjct: 315 DEDHGDWFLYTGSGGRDLSGNKRTNKAQSFDQKFEKLNEALRVSCRKGYPLRVVRSHKEK 374
Query: 1290 RSSYAPEAGLRYDGVYRIEKCWRKVGIQGHKVCRYLFIRCDNEPAPWTSDEHGDHPRPLP 1111
RSSYAPE G+RYDG+YRIEKCWRK G+QG+KVCRYLF+RCDNEPAPWTSD HGD PRPLP
Sbjct: 375 RSSYAPETGVRYDGIYRIEKCWRKNGMQGYKVCRYLFVRCDNEPAPWTSDNHGDRPRPLP 434
Query: 1110 VIKELKGATDLFERKESPSWDYDEEDNXXXXXXXXXXXXXPVNTVNPEDVKRARKAIKNA 931
VI EL+ A D+ ER+ SPSWDYDEE V+ + ED K+ RKA
Sbjct: 435 VIGELENAVDVTERRGSPSWDYDEEKGCWMWKKPPPPSRKWVDGGSGEDGKKTRKAKGRR 494
Query: 930 HNLSVREKLLKEFSCLICRKVLNLPLTTPCAHNFCKPCLEGAFAGQTFVRERTCQGRRTL 751
N+ VREKLLKE SC ICRKV+ PLTTPC HNFCK CLEGAFAGQ+F R+RTCQGRRTL
Sbjct: 495 QNVPVREKLLKELSCQICRKVMTNPLTTPCGHNFCKACLEGAFAGQSFTRQRTCQGRRTL 554
Query: 750 RAQKNIMKCPTCQNDISDFLKNPQVNRELLGVIESLQRKTEEENVEDLSGEESGGTDEQS 571
R QKN+MKCP+C NDI+++L+NPQVNREL+GVIE+LQR+ E D S EES D ++
Sbjct: 555 RVQKNVMKCPSCTNDIAEYLQNPQVNRELMGVIEALQRRNAESENFDDSTEESDAVDGKT 614
Query: 570 ETAAE 556
+ A+
Sbjct: 615 DAIAD 619
>ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS
2-like [Cucumis sativus]
Length = 745
Score = 727 bits (1877), Expect = 0.0
Identities = 337/462 (72%), Positives = 390/462 (84%)
Frame = -2
Query: 2007 NCSFCMQLPERPVTTPCGHNFCLKCFKKWMGQGGNTCAKCRSRIPQKMASQPRINASLIV 1828
NCSFC+QLP+RPVTTPCGHNFCLKCF+KW+G G TCAKCR IP KMASQPRIN++L+V
Sbjct: 141 NCSFCIQLPDRPVTTPCGHNFCLKCFQKWIGLGKKTCAKCRCVIPTKMASQPRINSTLVV 200
Query: 1827 AIRMXXXXXXXXXXAPVKVTHFVHNQLRPDKAFTTERAKKTGKANACSGKIFVTVPNDHF 1648
AIRM P K HFVHNQ RPDKA+TT+RA K GKANA SGKIFVT+P+DHF
Sbjct: 201 AIRMAKLSKSSVSGGPQKAYHFVHNQNRPDKAYTTDRAXKKGKANAASGKIFVTIPSDHF 260
Query: 1647 GPIPAENDPGRNQGVLVGECWEDRMECRQWGAHFPHVSGIGGQSTHGAQSVAISGGYQDD 1468
GPIPAENDP RNQGVLVGECWEDR+ECRQWGAHFPH++GI GQS +GAQSV +SGGYQDD
Sbjct: 261 GPIPAENDPERNQGVLVGECWEDRLECRQWGAHFPHIAGIAGQSNNGAQSVVLSGGYQDD 320
Query: 1467 EDHGEWFLYTGSGGRDLTGNKRTNKNQSKDQTFDKSNEALRVSCKKGYPVRVVRSHKEKR 1288
EDHGEWFLYTGSGGRDL+GNKRT+K+QS DQ F+K N+AL+VSC KGYPVRVVRSHKEKR
Sbjct: 321 EDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKYNKALQVSCLKGYPVRVVRSHKEKR 380
Query: 1287 SSYAPEAGLRYDGVYRIEKCWRKVGIQGHKVCRYLFIRCDNEPAPWTSDEHGDHPRPLPV 1108
SSYAPE GLRYDG+YRIEKCWRKVGIQG KVCRYLF+RCDN+PAPWTSD+HGD PRPLP
Sbjct: 381 SSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDDHGDRPRPLPS 440
Query: 1107 IKELKGATDLFERKESPSWDYDEEDNXXXXXXXXXXXXXPVNTVNPEDVKRARKAIKNAH 928
I ELK AT++ ERKE PSWD+DE+D+ PV T +P KR+R+ I+ +H
Sbjct: 441 IPELKKATNITERKEGPSWDFDEKDSQWKWSKPPPMSTRPVETEDPATGKRSRRKIRQSH 500
Query: 927 NLSVREKLLKEFSCLICRKVLNLPLTTPCAHNFCKPCLEGAFAGQTFVRERTCQGRRTLR 748
N++VRE+LLKEFSCLICR+V+++P+TTPCAHNFCK CLEGAFAG+TF+RER+ G R+LR
Sbjct: 501 NMNVRERLLKEFSCLICREVMSMPITTPCAHNFCKSCLEGAFAGKTFLRERS-SGGRSLR 559
Query: 747 AQKNIMKCPTCQNDISDFLKNPQVNRELLGVIESLQRKTEEE 622
++KN+M CP C DISDFL+N QVNRELL VIESL+ K EEE
Sbjct: 560 SRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKGKLEEE 601