BLASTX nr result

ID: Coptis23_contig00004508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004508
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511398.1| conserved hypothetical protein [Ricinus comm...    89   2e-15
ref|XP_002282787.1| PREDICTED: uncharacterized protein LOC100243...    86   1e-14
emb|CAN65788.1| hypothetical protein VITISV_037591 [Vitis vinifera]    85   2e-14
ref|XP_003613226.1| hypothetical protein MTR_5g034230 [Medicago ...    64   5e-14
ref|XP_002525375.1| conserved hypothetical protein [Ricinus comm...    82   1e-13

>ref|XP_002511398.1| conserved hypothetical protein [Ricinus communis]
           gi|223550513|gb|EEF52000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 8/82 (9%)
 Frame = -1

Query: 833 EEEEDDFEFAVLCRDPNTSPISADEIFSNGQIKPIYPVFNRDLLFAGGQDDFTKLQNGTT 654
           +E+ED+FEFA++CR+P  SPISAD+IF NGQI+PIYP+FN  LL      + +K +N TT
Sbjct: 71  QEDEDEFEFAIVCREPVESPISADDIFYNGQIRPIYPLFNTKLLLDKEDQESSKSKNTTT 130

Query: 653 V--------RLPLRKLLTEERD 612
                    RLPLRKL +EER+
Sbjct: 131 ATTTTTKPNRLPLRKLFSEERE 152



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 27/46 (58%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -1

Query: 149 AHEAHYMRNRAI-KESDRRRSYLPYRQDLVGFFANVNGLNRTLRPF 15
           A E +Y++ +++ KE D+R+S+LPYRQDLVG F+NVNGL+R L PF
Sbjct: 241 AVEKNYVKTKSVVKEGDKRQSFLPYRQDLVGLFSNVNGLSRNLHPF 286


>ref|XP_002282787.1| PREDICTED: uncharacterized protein LOC100243388 [Vitis vinifera]
          Length = 309

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
 Frame = -1

Query: 824 EDDFEFAVLCRDPNTSPISADEIFSNGQIKPIYPVFNRDLLFAGGQDDFTKLQNGT--TV 651
           +DD EFA + R+P TSPISADEIF NGQI+P++P+FNRDLL   GQ+    ++  T  ++
Sbjct: 94  DDDSEFAFVWREPETSPISADEIFYNGQIRPVFPIFNRDLLLGEGQNQEVSVKPPTPASI 153

Query: 650 RLPLRKLLTEER 615
           R PLRKLL EER
Sbjct: 154 RRPLRKLLIEER 165



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -1

Query: 119 AIKESDRRRSYLPYRQDLVGFFANVNGLNRTLRPF 15
           A KE DRRRS+LPYRQDLVGFFANVNGL+R L PF
Sbjct: 275 AKKEGDRRRSFLPYRQDLVGFFANVNGLSRNLHPF 309


>emb|CAN65788.1| hypothetical protein VITISV_037591 [Vitis vinifera]
          Length = 268

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
 Frame = -1

Query: 824 EDDFEFAVLCRDPNTSPISADEIFSNGQIKPIYPVFNRDLLFAGGQDDFTKLQNGT--TV 651
           +DD EFA + R+P TSPISADEIF NGQI+P++P+FNRDLL   GQ+    ++  T  ++
Sbjct: 53  DDDSEFAFVWREPETSPISADEIFYNGQIRPVFPIFNRDLLLXEGQNQEVSVKPPTPASI 112

Query: 650 RLPLRKLLTEER 615
           R PLRKLL EER
Sbjct: 113 RRPLRKLLIEER 124



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -1

Query: 119 AIKESDRRRSYLPYRQDLVGFFANVNGLNRTLRPF 15
           A KE DRRRS+LPYRQDLVGFFANVNGL+R L PF
Sbjct: 234 AKKEGDRRRSFLPYRQDLVGFFANVNGLSRNLHPF 268


>ref|XP_003613226.1| hypothetical protein MTR_5g034230 [Medicago truncatula]
           gi|355514561|gb|AES96184.1| hypothetical protein
           MTR_5g034230 [Medicago truncatula]
          Length = 248

 Score = 63.2 bits (152), Expect(2) = 5e-14
 Identities = 28/48 (58%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = -1

Query: 152 SAHEAHYMRNRAIKESDRRRSYLPYRQDLVGFFANVNGL--NRTLRPF 15
           SAHE HY+ ++A KE+D+R+SYLPYRQ+L GFFA+ NGL  +R + P+
Sbjct: 201 SAHEKHYVMSKARKENDKRKSYLPYRQELFGFFASTNGLGMSRNVHPY 248



 Score = 40.8 bits (94), Expect(2) = 5e-14
 Identities = 21/41 (51%), Positives = 25/41 (60%)
 Frame = -2

Query: 394 WRFRDLLHRSNSDGKDTFVFLAPSIKKKEKNVEAVSKERRD 272
           W+ RD   RSNSDGKD FVFL PS  K EK   +  + + D
Sbjct: 145 WKLRDPKLRSNSDGKDAFVFLNPS--KVEKTSSSAGETKND 183



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 34/71 (47%), Positives = 44/71 (61%)
 Frame = -1

Query: 833 EEEEDDFEFAVLCRDPNTSPISADEIFSNGQIKPIYPVFNRDLLFAGGQDDFTKLQNGTT 654
           EE+EDD EF  +  DP  SPISAD++F  GQI+PI+P F +DL F    DD+    N + 
Sbjct: 43  EEDEDDDEFTFVFADPKGSPISADDVFDKGQIRPIFPFFGQDLHFT---DDY---DNESG 96

Query: 653 VRLPLRKLLTE 621
            R P+RK   E
Sbjct: 97  NRSPVRKFFVE 107


>ref|XP_002525375.1| conserved hypothetical protein [Ricinus communis]
           gi|223535338|gb|EEF37013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 270

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 37/75 (49%), Positives = 55/75 (73%)
 Frame = -1

Query: 833 EEEEDDFEFAVLCRDPNTSPISADEIFSNGQIKPIYPVFNRDLLFAGGQDDFTKLQNGTT 654
           EEEE++ EF+  C +P+ SPISAD+IF NGQ++P++P+FNRDLLFAG +      ++ ++
Sbjct: 66  EEEEEEEEFSFACTNPDGSPISADDIFQNGQLRPVFPLFNRDLLFAGQES-----KSSSS 120

Query: 653 VRLPLRKLLTEERDP 609
            R PL+KL  E  +P
Sbjct: 121 ARSPLKKLFVEAEEP 135



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = -1

Query: 155 TSAHEAHYMRNRAIKESDRRRSYLPYRQDLVGFFANVNGLNRTLRPF 15
           +SAHE  Y+RNRA+ E  +R+SYLPYR   VGFF N +GL+R + P+
Sbjct: 227 SSAHERLYVRNRAVNEECKRKSYLPYR---VGFFTNASGLSRNVHPY 270


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