BLASTX nr result

ID: Coptis23_contig00004507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004507
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270598.2| PREDICTED: lipoamide acyltransferase compone...   383   e-104
emb|CBI22978.3| unnamed protein product [Vitis vinifera]              375   e-101
emb|CAN68576.1| hypothetical protein VITISV_019281 [Vitis vinifera]   374   e-101
ref|XP_002516951.1| lipoamide acyltransferase component of branc...   356   7e-96
gb|ACF17642.1| putative branched-chain alpha-keto acid dehydroge...   349   9e-94

>ref|XP_002270598.2| PREDICTED: lipoamide acyltransferase component of branched-chain
            alpha-keto acid dehydrogenase complex, mitochondrial-like
            [Vitis vinifera]
          Length = 506

 Score =  383 bits (984), Expect = e-104
 Identities = 210/376 (55%), Positives = 266/376 (70%), Gaps = 20/376 (5%)
 Frame = -2

Query: 1139 LVEKMIWRRIFRIGGAR--RVCAYVSNPSSKRTPLLIS-----GFCSQLIFSR--SISFS 987
            ++ + IW++  R    R  R CA  ++P S    + +      GFCSQ I SR    SFS
Sbjct: 1    MISRGIWQQKCRNAIRRWLRSCAAQTSPLSPSPVVSLGNSSYIGFCSQPIVSRYAMASFS 60

Query: 986  SV---YLQMNKLHEKNKCYFTTQALVDLPVGRTVEVPLAQTGEGIAECELLKWFVREGDH 816
             V    + +N  +   +  F++ AL+DLP    V +PLAQTGEGIAECELLKWFV+EGD 
Sbjct: 61   MVNDKLMDLNIPYSIKRSCFSSHALLDLPASGIVSIPLAQTGEGIAECELLKWFVKEGDQ 120

Query: 815  VEEFQRLCEVQSDKATIEITSRYKGQVSEVLYDSGDIVKVGETLLKMVIGESQMSTLPS- 639
            VEEFQ LCEVQSDKATIEITSRYKG VS+++Y  GDIVKVGE+LLKMV+ ESQ S L S 
Sbjct: 121  VEEFQPLCEVQSDKATIEITSRYKGTVSQIIYVPGDIVKVGESLLKMVVEESQGSNLTSN 180

Query: 638  --DDMRTDCLTSDTFEKCNQSFSPSEVGGVLATPAVRNIAKEFGMNINVVHGTGKDGRVL 465
              DDM++                 S  GGVLATPAVRN+AK++G++IN + GTG+DGRVL
Sbjct: 181  APDDMKS------------MDLRHSNTGGVLATPAVRNLAKQYGVDINHILGTGQDGRVL 228

Query: 464  KEDILNYAASRGMPELPSALPTKLLG-----AKEEKSLYKDGWHFEDQTVPLRGFQRAMV 300
            KED+L +A  +G+ + PS+L    +       K   +L  DGW +ED+TVP+RGFQRAM+
Sbjct: 229  KEDVLTHAVQKGLCKEPSSLSVNSVEHFQGEEKYSHTLAADGWQYEDKTVPIRGFQRAMI 288

Query: 299  KSMTMAAKVPHFHYLEEINCDALVELKAVFQSENSDPDVKHTYLPFLVKSLSMALSKHPL 120
            KSMT+AAK+PHFHY+EEINCDALV+LKA FQ EN DP+VKHT+LPF++K+LSMALSK+PL
Sbjct: 289  KSMTLAAKIPHFHYVEEINCDALVKLKASFQEENRDPEVKHTFLPFMIKTLSMALSKYPL 348

Query: 119  LNSSFSEELHEITLKG 72
            LNS F+EEL EIT+KG
Sbjct: 349  LNSCFNEELQEITVKG 364


>emb|CBI22978.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  375 bits (962), Expect = e-101
 Identities = 195/321 (60%), Positives = 245/321 (76%), Gaps = 13/321 (4%)
 Frame = -2

Query: 995 SFSSV---YLQMNKLHEKNKCYFTTQALVDLPVGRTVEVPLAQTGEGIAECELLKWFVRE 825
           SFS V    + +N  +   +  F++ AL+DLP    V +PLAQTGEGIAECELLKWFV+E
Sbjct: 3   SFSMVNDKLMDLNIPYSIKRSCFSSHALLDLPASGIVSIPLAQTGEGIAECELLKWFVKE 62

Query: 824 GDHVEEFQRLCEVQSDKATIEITSRYKGQVSEVLYDSGDIVKVGETLLKMVIGESQMSTL 645
           GD VEEFQ LCEVQSDKATIEITSRYKG VS+++Y  GDIVKVGE+LLKMV+ ESQ S L
Sbjct: 63  GDQVEEFQPLCEVQSDKATIEITSRYKGTVSQIIYVPGDIVKVGESLLKMVVEESQGSNL 122

Query: 644 PSDDMRTDCLTSDTFEKCNQSFSPSEV-----GGVLATPAVRNIAKEFGMNINVVHGTGK 480
            S+    D + S   E C+ S   S++     GGVLATPAVRN+AK++G++IN + GTG+
Sbjct: 123 TSN--APDDMKSMGAEVCDSSIQSSDLRHSNTGGVLATPAVRNLAKQYGVDINHILGTGQ 180

Query: 479 DGRVLKEDILNYAASRGMPELPSALPTKLLG-----AKEEKSLYKDGWHFEDQTVPLRGF 315
           DGRVLKED+L +A  +G+ + PS+L    +       K   +L  DGW +ED+TVP+RGF
Sbjct: 181 DGRVLKEDVLTHAVQKGLCKEPSSLSVNSVEHFQGEEKYSHTLAADGWQYEDKTVPIRGF 240

Query: 314 QRAMVKSMTMAAKVPHFHYLEEINCDALVELKAVFQSENSDPDVKHTYLPFLVKSLSMAL 135
           QRAM+KSMT+AAK+PHFHY+EEINCDALV+LKA FQ EN DP+VKHT+LPF++K+LSMAL
Sbjct: 241 QRAMIKSMTLAAKIPHFHYVEEINCDALVKLKASFQEENRDPEVKHTFLPFMIKTLSMAL 300

Query: 134 SKHPLLNSSFSEELHEITLKG 72
           SK+PLLNS F+EEL EIT+KG
Sbjct: 301 SKYPLLNSCFNEELQEITVKG 321


>emb|CAN68576.1| hypothetical protein VITISV_019281 [Vitis vinifera]
          Length = 527

 Score =  374 bits (960), Expect = e-101
 Identities = 192/304 (63%), Positives = 238/304 (78%), Gaps = 10/304 (3%)
 Frame = -2

Query: 953 KNKCYFTTQALVDLPVGRTVEVPLAQTGEGIAECELLKWFVREGDHVEEFQRLCEVQSDK 774
           K  C F++ AL+DLP    V +PLAQTGEGIAECELLKWFV+EGD VEEFQ LCEVQSDK
Sbjct: 93  KRSC-FSSHALLDLPASGIVSIPLAQTGEGIAECELLKWFVKEGDQVEEFQPLCEVQSDK 151

Query: 773 ATIEITSRYKGQVSEVLYDSGDIVKVGETLLKMVIGESQMSTLPSDDMRTDCLTSDTFEK 594
           ATIEITSRYKG VS+++Y  GDIVKVGE+LLKMV+ ESQ S L S+    D + S   E 
Sbjct: 152 ATIEITSRYKGTVSQIIYVPGDIVKVGESLLKMVVEESQGSNLTSN--APDDMKSMGAEV 209

Query: 593 CNQSFSPSEV-----GGVLATPAVRNIAKEFGMNINVVHGTGKDGRVLKEDILNYAASRG 429
           C+ S   S++     GGVLATPAVRN+AK++G++IN + GTG+DGRVLKED+L +A  +G
Sbjct: 210 CDSSIQSSDLRXSNTGGVLATPAVRNLAKQYGVDINHILGTGQDGRVLKEDVLTHAVQKG 269

Query: 428 MPELPSALPTKLLG-----AKEEKSLYKDGWHFEDQTVPLRGFQRAMVKSMTMAAKVPHF 264
           + + PS+L    +       K   +L  DGW +ED+TVP+RGFQRAM+KSMT+AAK+PHF
Sbjct: 270 LCKEPSSLSVNSVEHFQGEEKYSHTLAADGWQYEDKTVPIRGFQRAMIKSMTLAAKIPHF 329

Query: 263 HYLEEINCDALVELKAVFQSENSDPDVKHTYLPFLVKSLSMALSKHPLLNSSFSEELHEI 84
           HY+EEINCDALV+LKA FQ EN DP+VKHT+LPF++K+LSMALSK+PLLNS F+EEL EI
Sbjct: 330 HYVEEINCDALVKLKASFQEENRDPEVKHTFLPFMIKTLSMALSKYPLLNSCFNEELQEI 389

Query: 83  TLKG 72
           T+KG
Sbjct: 390 TVKG 393


>ref|XP_002516951.1| lipoamide acyltransferase component of branched-chain alpha-keto acid
            dehydrogenase, putative [Ricinus communis]
            gi|223544039|gb|EEF45565.1| lipoamide acyltransferase
            component of branched-chain alpha-keto acid
            dehydrogenase, putative [Ricinus communis]
          Length = 504

 Score =  356 bits (913), Expect = 7e-96
 Identities = 192/369 (52%), Positives = 258/369 (69%), Gaps = 13/369 (3%)
 Frame = -2

Query: 1139 LVEKMIWRRIFRIGGARRVCAYVSNPSSKRTPLLISGFCSQLI-----FSRSISFSSVYL 975
            ++ +  W+R     G R +  Y    SS    +L       L+      S S + ++  +
Sbjct: 1    MITRRFWQRRVWSSGTRSLYPYTRPSSSTPAAVLTERKHQSLLDLSYYASASFTLTNTSV 60

Query: 974  QMNKLHEKNKCYFTTQALVDLPVGR-TVEVPLAQTGEGIAECELLKWFVREGDHVEEFQR 798
            ++   +++N+C+FT+ AL D+P+G   V+VPLAQTGEGIAECELL+WFV+EGD VEEFQ 
Sbjct: 61   EVRNRYKENRCWFTSHALADVPIGGGVVDVPLAQTGEGIAECELLQWFVQEGDEVEEFQP 120

Query: 797  LCEVQSDKATIEITSRYKGQVSEVLYDSGDIVKVGETLLKMVIGESQMSTLPSDDMRTDC 618
            LCEVQSDKATIEITSRYKG+V+++LY  GDIVKVGETLLKM + ES ++++P  D   D 
Sbjct: 121  LCEVQSDKATIEITSRYKGKVAQILYVPGDIVKVGETLLKMAVEES-LASIPRVDGLKDT 179

Query: 617  LTSDTFEKCNQSFSPSEVGGVLATPAVRNIAKEFGMNINVVHGTGKDGRVLKEDILNYAA 438
               D  ++       S++GGVL TPAVR++AK++G+++N V GTGKDG++LKEDILNY  
Sbjct: 180  KALDLEQE------KSQIGGVLCTPAVRHLAKQYGIDLNDVSGTGKDGKILKEDILNYGI 233

Query: 437  SRGM----PELPSALPTKLLGAKEEKSLYKD---GWHFEDQTVPLRGFQRAMVKSMTMAA 279
             +G+    P   +A     L   +EKS       G  ++D+TVPLRGFQR MVK+M++AA
Sbjct: 234  QKGVIEDSPGASNADSGNQLKKGKEKSTCTSAEVGQLYDDKTVPLRGFQRTMVKTMSIAA 293

Query: 278  KVPHFHYLEEINCDALVELKAVFQSENSDPDVKHTYLPFLVKSLSMALSKHPLLNSSFSE 99
            KVPHFHY+EEINC+ALVELKA FQS N+DP +KHT+LP L+KSLSMALSK+P +NS F+E
Sbjct: 294  KVPHFHYVEEINCNALVELKASFQSNNTDPGIKHTFLPLLIKSLSMALSKYPWMNSCFNE 353

Query: 98   ELHEITLKG 72
            E  E+ LKG
Sbjct: 354  EAIEVLLKG 362


>gb|ACF17642.1| putative branched-chain alpha-keto acid dehydrogenase E2 subunit
            [Capsicum annuum]
          Length = 505

 Score =  349 bits (895), Expect = 9e-94
 Identities = 188/322 (58%), Positives = 238/322 (73%), Gaps = 5/322 (1%)
 Frame = -2

Query: 1022 SQLIFSRS--ISFSSVYLQMNKLHEKNKCYFTTQALVDLPVGRTVEVPLAQTGEGIAECE 849
            SQL F R+   +F S Y + N       C FTTQA +DLP G  +++PLAQTGEGIAECE
Sbjct: 48   SQLHFFRNSTTAFCS-YNKPNVSFTLRGCSFTTQAAIDLPAGGVIDIPLAQTGEGIAECE 106

Query: 848  LLKWFVREGDHVEEFQRLCEVQSDKATIEITSRYKGQVSEVLYDSGDIVKVGETLLKMVI 669
            LLKWFV+EGD VEEFQ LCEVQSDKATIEITSRYKG++S++L+  GDIVKVGETLLK+ I
Sbjct: 107  LLKWFVQEGDLVEEFQPLCEVQSDKATIEITSRYKGKISQILHVPGDIVKVGETLLKIGI 166

Query: 668  GESQMSTLPSD-DMRTDCLTSDTFEKCNQSFSPS--EVGGVLATPAVRNIAKEFGMNINV 498
             E       SD   +   L SD     + S  P   ++GGV +TPA+RN+AK++G++IN 
Sbjct: 167  DEIPDPIETSDASEKMTSLESDCSGSSDISSVPGKPKIGGVSSTPAIRNLAKQYGLDIND 226

Query: 497  VHGTGKDGRVLKEDILNYAASRGMPELPSALPTKLLGAKEEKSLYKDGWHFEDQTVPLRG 318
            V  TGKDGR+LKED++NYA  +G+ E P+    KL    E   L   G  +ED+T+ LRG
Sbjct: 227  VPATGKDGRILKEDVINYAMQKGLIEAPACALQKL---SEVSPLIGGG--YEDKTLQLRG 281

Query: 317  FQRAMVKSMTMAAKVPHFHYLEEINCDALVELKAVFQSENSDPDVKHTYLPFLVKSLSMA 138
            +QRAMVKSMT+AAK+PHF+Y+EE+NCDALVELK  FQ+ENSDP++KHT+LP L+KSLSMA
Sbjct: 282  YQRAMVKSMTLAAKIPHFYYVEEMNCDALVELKTSFQNENSDPEIKHTFLPVLIKSLSMA 341

Query: 137  LSKHPLLNSSFSEELHEITLKG 72
            L+ HP+LNS F+EE +E+ LKG
Sbjct: 342  LTTHPMLNSRFNEESYEVILKG 363


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