BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004497
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vit...   291   2e-76
emb|CBI39159.3| unnamed protein product [Vitis vinifera]              285   3e-74
ref|XP_002527387.1| DNA binding protein, putative [Ricinus commu...   262   1e-67
ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|2...   256   1e-65
ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like...   228   2e-57

>ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
          Length = 357

 Score =  291 bits (746), Expect = 2e-76
 Identities = 159/235 (67%), Positives = 181/235 (77%), Gaps = 1/235 (0%)
 Frame = +1

Query: 424  LIRHSSSPAGFFNHLVVDN-GFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLS 600
            LIRHSSSPAGF N L  DN GF+V+RG G+Y+SQ G  N G G  RL SQLSF RQDSLS
Sbjct: 124  LIRHSSSPAGFLNQLTADNCGFSVTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDSLS 182

Query: 601  QIXXXXXXXXXXXXXXXXXRNAGQGYVSAGNFPMGSWDDSSNTIMFSTPANKRAKNMNGD 780
            QI                 RNA   Y +A +FPM +WD++ NTI+FST  NKRAKN+NGD
Sbjct: 183  QISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNINGD 240

Query: 781  IAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTR 960
            I  +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERRTR
Sbjct: 241  ILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTR 300

Query: 961  ISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1125
            IS KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 301  ISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 355


>emb|CBI39159.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  285 bits (728), Expect = 3e-74
 Identities = 156/234 (66%), Positives = 178/234 (76%)
 Frame = +1

Query: 424  LIRHSSSPAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLSQ 603
            LIRHSSSPAGF N L  DN   ++RG G+Y+SQ G  N G G  RL SQLSF RQDSLSQ
Sbjct: 181  LIRHSSSPAGFLNQLTADN---LTRGTGNYSSQGGC-NGGHGISRLKSQLSFKRQDSLSQ 236

Query: 604  IXXXXXXXXXXXXXXXXXRNAGQGYVSAGNFPMGSWDDSSNTIMFSTPANKRAKNMNGDI 783
            I                 RNA   Y +A +FPM +WD++ NTI+FST  NKRAKN+NGDI
Sbjct: 237  ISEVSENMVDGISSDNGHRNATHSYATA-SFPMDAWDNT-NTIVFSTTPNKRAKNINGDI 294

Query: 784  AAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTRI 963
              +LS ++ QFSLP+TSLEM+ VEKLLQ+  DSVPCK RAKRG ATHPRSIAERERRTRI
Sbjct: 295  LNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSIAERERRTRI 354

Query: 964  SEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1125
            S KL+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKLNK+L++CTCG KQ
Sbjct: 355  SGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCGCKQ 408


>ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
            gi|223533239|gb|EEF34994.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 377

 Score =  262 bits (670), Expect = 1e-67
 Identities = 144/234 (61%), Positives = 172/234 (73%), Gaps = 1/234 (0%)
 Frame = +1

Query: 424  LIRHSSSPAGFFNH-LVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLS 600
            L+R  SSPAGF +H L  +NGF+++ G G YNS  G  N G    RL SQLSFTRQDSLS
Sbjct: 144  LLRQKSSPAGFLSHHLANENGFSITPGTGGYNSSNGP-NGGHTVSRLKSQLSFTRQDSLS 202

Query: 601  QIXXXXXXXXXXXXXXXXXRNAGQGYVSAGNFPMGSWDDSSNTIMFSTPANKRAKNMNGD 780
            QI                  N+   Y + G F MGSWD  +N+I+FS P +KR KN++GD
Sbjct: 203  QISEVSEDIVEGINSNTGHHNSPHSYSTTG-FGMGSWD-GTNSIVFSGPPSKRMKNIDGD 260

Query: 781  IAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTR 960
            +   L+G+++QFSLP+TSLEM+ VEKLL I  DSVPCK RAKRG ATHPRSIAERERRTR
Sbjct: 261  LFNCLNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTR 320

Query: 961  ISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSK 1122
            IS +L+KLQ+LVPNMDKQTS ADMLDLAVQHIKGLQ EVQKL+K+L++CTCG K
Sbjct: 321  ISGRLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTCGCK 374


>ref|XP_002321112.1| predicted protein [Populus trichocarpa] gi|222861885|gb|EEE99427.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  256 bits (653), Expect = 1e-65
 Identities = 141/235 (60%), Positives = 173/235 (73%), Gaps = 1/235 (0%)
 Frame = +1

Query: 424  LIRHSSSPAGFFNHLVVDNG-FTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQDSLS 600
            L+R  SSPAGF +HL  +NG F+++RG G YNS+ GS   G G  RL SQLSFTRQDSLS
Sbjct: 110  LVRQRSSPAGFLSHLATENGGFSITRGTGGYNSRNGS---GGGPSRLKSQLSFTRQDSLS 166

Query: 601  QIXXXXXXXXXXXXXXXXXRNAGQGYVSAGNFPMGSWDDSSNTIMFSTPANKRAKNMNGD 780
            QI                 +N+   Y SA +F M SWD + N+I+FS   +K+A+  +GD
Sbjct: 167  QISEVSENVVEGIGSDNGSQNSTHSY-SAASFGMESWD-TPNSIVFSGHPSKQARTGDGD 224

Query: 781  IAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAERERRTR 960
            I +  + +++QFSLP+TSLEM+ VEKLLQI  DSVPCK RAKRG ATHPRSIAERERRTR
Sbjct: 225  IYSCFNALETQFSLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTR 284

Query: 961  ISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1125
            IS KL+ LQ+LVPNMDKQTS ADML+LAV+HIKGLQ EV+KL+K+L+ CTCG KQ
Sbjct: 285  ISGKLKTLQDLVPNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTCGCKQ 339


>ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
          Length = 370

 Score =  228 bits (582), Expect = 2e-57
 Identities = 131/240 (54%), Positives = 162/240 (67%), Gaps = 6/240 (2%)
 Frame = +1

Query: 424  LIRHSSSPAGFFNHLVVDNGFTVSRGIGSYNSQAGSSNHGIGNGRLASQLSFTRQD-SLS 600
            L+R  SSPAGF  HL      +V+   G ++   G    G G GRL SQ+SF  QD SLS
Sbjct: 137  LVRQRSSPAGFLGHL------SVAEPNGGFSLTMGGGGGGNGGGRLKSQMSFNGQDNSLS 190

Query: 601  QIXXXXXXXXXXXXXXXXX----RNAGQGYVSAGNFPM-GSWDDSSNTIMFSTPANKRAK 765
            QI                      N+   +  +  F M  SWD SSN+I+F+ P  KR+K
Sbjct: 191  QISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSSNSIVFAAPHAKRSK 250

Query: 766  NMNGDIAAALSGVDSQFSLPRTSLEMSHVEKLLQIHPDSVPCKSRAKRGFATHPRSIAER 945
            + +   A   +G++SQFSLP+T+LEM+ VE+LLQI  DSVPCK RAKRG ATHPRSIAER
Sbjct: 251  HHSD--ADFFTGLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIRAKRGCATHPRSIAER 308

Query: 946  ERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVQHIKGLQTEVQKLNKDLDHCTCGSKQ 1125
            ERRTRIS KL+KLQELVPNMDKQTS +DMLDLAVQHIKGLQ ++QKLNK++++CTCGSK+
Sbjct: 309  ERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQKLNKEVENCTCGSKE 368