BLASTX nr result

ID: Coptis23_contig00004491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004491
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...   477   e-132
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...   477   e-132
emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]   477   e-132
ref|XP_002511740.1| conserved hypothetical protein [Ricinus comm...   444   e-122
gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossyp...   442   e-122

>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
            vinifera]
          Length = 416

 Score =  477 bits (1227), Expect = e-132
 Identities = 243/331 (73%), Positives = 280/331 (84%), Gaps = 3/331 (0%)
 Frame = +3

Query: 234  TTNAGTNSFNVSAILSGFPEYSLYNSYLSQTKLSDEINSRQTITCLVLNNAAMSALAGKH 413
            T      + N++ +LS FPEYSLYNSYLSQTKL+DEINSRQT+TCLVLNNAAMSALAGKH
Sbjct: 13   TLAVSVRAHNITDMLSPFPEYSLYNSYLSQTKLADEINSRQTLTCLVLNNAAMSALAGKH 72

Query: 414  PLSVIKNXXXXXXXXXXXXGQKLHDISNGXXXXXXXXXXXGNAPGNLGFVNITDLKGGKV 593
            PLSVIK             G+KLH+IS+G           GNAPGNLGFVNITDLKGGKV
Sbjct: 73   PLSVIKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKV 132

Query: 594  GFGSAAPGSKLDSTYSKSVKQIPYSISILEINAPIIAPGLLTA---SPSVANITALLDKA 764
            GFGSAAPGSKLDS+Y+KSVKQIPY+IS+LEI+APIIAPGLLTA   S S  NIT LL+KA
Sbjct: 133  GFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGLLTAPAPSASDVNITGLLEKA 192

Query: 765  GCKTFSSLIVSSGVLKIYQSAAAKGLTVFAPSDEAFKAPGIPDLTKLTNAEVVTLLQYHA 944
            GCKTF+SL+VS+GV+KIY+SA  KGLTVFAP+DEAFKA G+PDLTKLTNAE+VTLLQYHA
Sbjct: 193  GCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADGVPDLTKLTNAELVTLLQYHA 252

Query: 945  LAGYTPIGTLKTTKDPISTLATNGASKYDLTVKTAGDSVTLDTGVDASRVSATVIDSTPL 1124
            +A Y+PIG+LKT+KDPISTLAT+GA KYDLTV TAGDSVTL TGVD+SRV+ TV+D+TPL
Sbjct: 253  VAAYSPIGSLKTSKDPISTLATSGAGKYDLTVSTAGDSVTLKTGVDSSRVADTVLDATPL 312

Query: 1125 CIFTVDSILLPTELFGKSPSPAPSMVPEASP 1217
            C+FTVD++LLPTELFGKSPSPAP+  P +SP
Sbjct: 313  CLFTVDNLLLPTELFGKSPSPAPAPEPVSSP 343


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score =  477 bits (1227), Expect = e-132
 Identities = 243/331 (73%), Positives = 280/331 (84%), Gaps = 3/331 (0%)
 Frame = +3

Query: 234  TTNAGTNSFNVSAILSGFPEYSLYNSYLSQTKLSDEINSRQTITCLVLNNAAMSALAGKH 413
            T      + N++ +LS FPEYSLYNSYLSQTKL+DEINSRQT+TCLVLNNAAMSALAGKH
Sbjct: 13   TLAVSVRAHNITDMLSPFPEYSLYNSYLSQTKLADEINSRQTLTCLVLNNAAMSALAGKH 72

Query: 414  PLSVIKNXXXXXXXXXXXXGQKLHDISNGXXXXXXXXXXXGNAPGNLGFVNITDLKGGKV 593
            PLSVIK             G+KLH+IS+G           GNAPGNLGFVNITDLKGGKV
Sbjct: 73   PLSVIKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKV 132

Query: 594  GFGSAAPGSKLDSTYSKSVKQIPYSISILEINAPIIAPGLLTA---SPSVANITALLDKA 764
            GFGSAAPGSKLDS+Y+KSVKQIPY+IS+LEI+APIIAPGLLTA   S S  NIT LL+KA
Sbjct: 133  GFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGLLTAPAPSASDVNITGLLEKA 192

Query: 765  GCKTFSSLIVSSGVLKIYQSAAAKGLTVFAPSDEAFKAPGIPDLTKLTNAEVVTLLQYHA 944
            GCKTF+SL+VS+GV+KIY+SA  KGLTVFAP+DEAFKA G+PDLTKLTNAE+VTLLQYHA
Sbjct: 193  GCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADGVPDLTKLTNAELVTLLQYHA 252

Query: 945  LAGYTPIGTLKTTKDPISTLATNGASKYDLTVKTAGDSVTLDTGVDASRVSATVIDSTPL 1124
            +A Y+PIG+LKT+KDPISTLAT+GA KYDLTV TAGDSVTL TGVD+SRV+ TV+D+TPL
Sbjct: 253  VAAYSPIGSLKTSKDPISTLATSGAGKYDLTVSTAGDSVTLKTGVDSSRVADTVLDATPL 312

Query: 1125 CIFTVDSILLPTELFGKSPSPAPSMVPEASP 1217
            C+FTVD++LLPTELFGKSPSPAP+  P +SP
Sbjct: 313  CLFTVDNLLLPTELFGKSPSPAPAPEPVSSP 343


>emb|CAN65447.1| hypothetical protein VITISV_011425 [Vitis vinifera]
          Length = 416

 Score =  477 bits (1227), Expect = e-132
 Identities = 243/331 (73%), Positives = 280/331 (84%), Gaps = 3/331 (0%)
 Frame = +3

Query: 234  TTNAGTNSFNVSAILSGFPEYSLYNSYLSQTKLSDEINSRQTITCLVLNNAAMSALAGKH 413
            T      + N++ +LS FPEYSLYNSYLSQTKL+DEINSRQT+TCLVLNNAAMSALAGKH
Sbjct: 13   TLAVSVRAHNITDMLSPFPEYSLYNSYLSQTKLADEINSRQTLTCLVLNNAAMSALAGKH 72

Query: 414  PLSVIKNXXXXXXXXXXXXGQKLHDISNGXXXXXXXXXXXGNAPGNLGFVNITDLKGGKV 593
            PLSVIK             G+KLH+IS+G           GNAPGNLGFVNITDLKGGKV
Sbjct: 73   PLSVIKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGNLGFVNITDLKGGKV 132

Query: 594  GFGSAAPGSKLDSTYSKSVKQIPYSISILEINAPIIAPGLLTA---SPSVANITALLDKA 764
            GFGSAAPGSKLDS+Y+KSVKQIPY+IS+LEI+APIIAPGLLTA   S S  NIT LL+KA
Sbjct: 133  GFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGLLTAPAPSASDVNITGLLEKA 192

Query: 765  GCKTFSSLIVSSGVLKIYQSAAAKGLTVFAPSDEAFKAPGIPDLTKLTNAEVVTLLQYHA 944
            GCKTF+SL+VS+GV+KIY+SA  KGLTVFAP+DEAFKA G+PDLTKLTNAE+VTLLQYHA
Sbjct: 193  GCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADGVPDLTKLTNAELVTLLQYHA 252

Query: 945  LAGYTPIGTLKTTKDPISTLATNGASKYDLTVKTAGDSVTLDTGVDASRVSATVIDSTPL 1124
            +A Y+PIG+LKT+KDPISTLAT+GA KYDLTV TAGDSVTL TGVD+SRV+ TV+D+TPL
Sbjct: 253  VAAYSPIGSLKTSKDPISTLATSGAGKYDLTVSTAGDSVTLKTGVDSSRVADTVLDATPL 312

Query: 1125 CIFTVDSILLPTELFGKSPSPAPSMVPEASP 1217
            C+FTVD++LLPTELFGKSPSPAP+  P +SP
Sbjct: 313  CLFTVDNLLLPTELFGKSPSPAPAPEPVSSP 343


>ref|XP_002511740.1| conserved hypothetical protein [Ricinus communis]
            gi|223548920|gb|EEF50409.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 425

 Score =  444 bits (1142), Expect = e-122
 Identities = 224/322 (69%), Positives = 265/322 (82%), Gaps = 3/322 (0%)
 Frame = +3

Query: 261  NVSAILSGFPEYSLYNSYLSQTKLSDEINSRQTITCLVLNNAAMSALAGKHPLSVIKNXX 440
            N++ ILSGFP+YS +N YL+QTKL+DEINSR+TIT L L+N AMSALA KHPLSVIKN  
Sbjct: 25   NITDILSGFPDYSEFNKYLTQTKLADEINSRETITVLALSNGAMSALASKHPLSVIKNAL 84

Query: 441  XXXXXXXXXXGQKLHDISNGXXXXXXXXXXXGNAPGNLGFVNITDLKGGKVGFGSAAPGS 620
                        KLH IS G           GNAPGNLGFVNITDL+GGKVGFGSAAPGS
Sbjct: 85   SLLVLLDYYDPSKLHQISKGTTLSTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSAAPGS 144

Query: 621  KLDSTYSKSVKQIPYSISILEINAPIIAPGLLTA---SPSVANITALLDKAGCKTFSSLI 791
            KLDS+Y+KSVKQIPY+IS++E++API+APG+ TA   SPS  NIT LL+KAGCKTF+ L+
Sbjct: 145  KLDSSYTKSVKQIPYNISVIEVSAPIVAPGIFTAPAPSPSDVNITGLLEKAGCKTFAGLL 204

Query: 792  VSSGVLKIYQSAAAKGLTVFAPSDEAFKAPGIPDLTKLTNAEVVTLLQYHALAGYTPIGT 971
            +SSGVLK YQSAA KGLT+FAP+DEAFKA G+PDL+KL+NAE+V+LL+YHA  GY+P G 
Sbjct: 205  LSSGVLKTYQSAADKGLTIFAPNDEAFKAAGVPDLSKLSNAELVSLLEYHASVGYSPKGA 264

Query: 972  LKTTKDPISTLATNGASKYDLTVKTAGDSVTLDTGVDASRVSATVIDSTPLCIFTVDSIL 1151
            LKT+KDPISTLATNGA+KYDLTV +AGD VTL TGVD+SRV+ TV+DSTPL IFTVD++L
Sbjct: 265  LKTSKDPISTLATNGANKYDLTVSSAGDDVTLHTGVDSSRVAETVLDSTPLVIFTVDNVL 324

Query: 1152 LPTELFGKSPSPAPSMVPEASP 1217
            LPTELFGKSPSPAP+  P A+P
Sbjct: 325  LPTELFGKSPSPAPAPEPVAAP 346


>gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossypium hirsutum]
          Length = 425

 Score =  442 bits (1137), Expect = e-122
 Identities = 228/325 (70%), Positives = 261/325 (80%), Gaps = 3/325 (0%)
 Frame = +3

Query: 252  NSFNVSAILSGFPEYSLYNSYLSQTKLSDEINSRQTITCLVLNNAAMSALAGKHPLSVIK 431
            N  N++AIL GFP+YS+YNS+L+QTKL+DEIN+R+TITCLVLNN AMSAL  KHPLSV+K
Sbjct: 22   NGHNITAILEGFPDYSVYNSFLTQTKLADEINTRETITCLVLNNGAMSALTSKHPLSVVK 81

Query: 432  NXXXXXXXXXXXXGQKLHDISNGXXXXXXXXXXXGNAPGNLGFVNITDLKGGKVGFGSAA 611
            N             QKLH IS+G           GNAPGNLGFVNITDL+GGKVGFGSA 
Sbjct: 82   NILSLHVLLDYYDPQKLHKISDGTTLTTTLYQTTGNAPGNLGFVNITDLQGGKVGFGSAI 141

Query: 612  PGSKLDSTYSKSVKQIPYSISILEINAPIIAPGLLTA---SPSVANITALLDKAGCKTFS 782
            PGSKLDS+Y+KSVKQIPY+ISILEI+APIIAPG+LTA   S S  NIT LL+KAGCKTF+
Sbjct: 142  PGSKLDSSYTKSVKQIPYNISILEISAPIIAPGILTAPAPSSSGVNITGLLEKAGCKTFA 201

Query: 783  SLIVSSGVLKIYQSAAAKGLTVFAPSDEAFKAPGIPDLTKLTNAEVVTLLQYHALAGYTP 962
            SL+ SSGVLK Y+SA  KGLTVFAPSDEAFKA G+PDL+KLTNAE V+LL+YHA   Y P
Sbjct: 202  SLLTSSGVLKTYESALDKGLTVFAPSDEAFKAEGVPDLSKLTNAEQVSLLEYHASPDYKP 261

Query: 963  IGTLKTTKDPISTLATNGASKYDLTVKTAGDSVTLDTGVDASRVSATVIDSTPLCIFTVD 1142
             GTLKTTKDPISTLATNGA KYDLTV TAGDS+TL TGV  SRV+  V DS P+ IFTVD
Sbjct: 262  KGTLKTTKDPISTLATNGAGKYDLTVTTAGDSMTLHTGVGPSRVAEAVFDSPPVAIFTVD 321

Query: 1143 SILLPTELFGKSPSPAPSMVPEASP 1217
            ++LLP+ELFGKSPSPAP+  P + P
Sbjct: 322  NVLLPSELFGKSPSPAPAPEPVSLP 346


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