BLASTX nr result

ID: Coptis23_contig00004490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004490
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277728.1| PREDICTED: uncharacterized protein LOC100248...   194   6e-48
ref|XP_002299308.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|NP_001238126.1| uncharacterized protein LOC100499928 [Glycin...   189   2e-46
ref|NP_001240989.1| uncharacterized protein LOC100795278 [Glycin...   188   4e-46
ref|XP_003601777.1| hypothetical protein MTR_3g085280 [Medicago ...   184   8e-45

>ref|XP_002277728.1| PREDICTED: uncharacterized protein LOC100248862 [Vitis vinifera]
           gi|297738458|emb|CBI27659.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/117 (82%), Positives = 102/117 (87%)
 Frame = -2

Query: 405 SKTEGRIGQTTNVVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMIVA 226
           SKTEGR+GQTTNVVIGGTVTDDSTNEWL LDQKVNSYPTVRGFTAIGTGGDDFVQAM+VA
Sbjct: 84  SKTEGRVGQTTNVVIGGTVTDDSTNEWLALDQKVNSYPTVRGFTAIGTGGDDFVQAMVVA 143

Query: 225 VESVLEEPVPEDRVTQKLSSGGKYVSVNIGPXXXXXXXXXQAVYNAMKRDDRMKYFL 55
           VESVL+ P+PE  V QKLSS GKYVSVNIGP         QAVYNAM+RDDRMKYFL
Sbjct: 144 VESVLQHPIPEGHVKQKLSSRGKYVSVNIGPVRVISSEQVQAVYNAMRRDDRMKYFL 200


>ref|XP_002299308.1| predicted protein [Populus trichocarpa] gi|222846566|gb|EEE84113.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/117 (78%), Positives = 103/117 (88%)
 Frame = -2

Query: 405 SKTEGRIGQTTNVVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMIVA 226
           S+TEGR+GQTTNVVIGGTV DDSTNEWL LD+KVNSYPTVRGFTAIGTGGDDFVQAM++A
Sbjct: 25  SRTEGRVGQTTNVVIGGTVADDSTNEWLALDKKVNSYPTVRGFTAIGTGGDDFVQAMVIA 84

Query: 225 VESVLEEPVPEDRVTQKLSSGGKYVSVNIGPXXXXXXXXXQAVYNAMKRDDRMKYFL 55
           VESV+++P+PE RV QK+SS GKYVSVNIGP         QAVYNAM+RDDRMKYFL
Sbjct: 85  VESVIQQPIPEGRVRQKVSSRGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 141


>ref|NP_001238126.1| uncharacterized protein LOC100499928 [Glycine max]
           gi|255627741|gb|ACU14215.1| unknown [Glycine max]
          Length = 186

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/117 (78%), Positives = 104/117 (88%)
 Frame = -2

Query: 405 SKTEGRIGQTTNVVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMIVA 226
           SK EGR+GQTTN+VIGGTV+DDSTNEWLTLDQKVNSYPTVRGFTAIGTGG+DFVQAM+VA
Sbjct: 70  SKAEGRVGQTTNMVIGGTVSDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGEDFVQAMVVA 129

Query: 225 VESVLEEPVPEDRVTQKLSSGGKYVSVNIGPXXXXXXXXXQAVYNAMKRDDRMKYFL 55
           VESV+++P+P+ RV QKLS+ GKYVSVNIGP         QAVYNAM+RDDRMKYFL
Sbjct: 130 VESVIQQPIPQGRVKQKLSARGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 186


>ref|NP_001240989.1| uncharacterized protein LOC100795278 [Glycine max]
           gi|255645459|gb|ACU23225.1| unknown [Glycine max]
          Length = 186

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/117 (77%), Positives = 104/117 (88%)
 Frame = -2

Query: 405 SKTEGRIGQTTNVVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMIVA 226
           SK EGR+GQTTN+VIGGTV+DDS+NEWLTLDQKVNSYPTVRGFTAIGTGG+DFVQAM+VA
Sbjct: 70  SKAEGRVGQTTNMVIGGTVSDDSSNEWLTLDQKVNSYPTVRGFTAIGTGGEDFVQAMVVA 129

Query: 225 VESVLEEPVPEDRVTQKLSSGGKYVSVNIGPXXXXXXXXXQAVYNAMKRDDRMKYFL 55
           VESV+++P+P+ RV QKLS+ GKYVSVNIGP         QAVYNAM+RDDRMKYFL
Sbjct: 130 VESVIQQPIPQGRVKQKLSARGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 186


>ref|XP_003601777.1| hypothetical protein MTR_3g085280 [Medicago truncatula]
           gi|355490825|gb|AES72028.1| hypothetical protein
           MTR_3g085280 [Medicago truncatula]
           gi|388510352|gb|AFK43242.1| unknown [Medicago
           truncatula]
          Length = 205

 Score =  184 bits (466), Expect = 8e-45
 Identities = 89/117 (76%), Positives = 102/117 (87%)
 Frame = -2

Query: 405 SKTEGRIGQTTNVVIGGTVTDDSTNEWLTLDQKVNSYPTVRGFTAIGTGGDDFVQAMIVA 226
           SKTEGRIGQTTN+VIGGTVTDDSTNEW+ LD+KVN+YPTVRGFTAIGTGGDDFVQAM+VA
Sbjct: 89  SKTEGRIGQTTNMVIGGTVTDDSTNEWVALDKKVNTYPTVRGFTAIGTGGDDFVQAMVVA 148

Query: 225 VESVLEEPVPEDRVTQKLSSGGKYVSVNIGPXXXXXXXXXQAVYNAMKRDDRMKYFL 55
           VESV+++P+P+  V  K+S+ GKYVSVNIGP         QAVYNAM+RDDRMKYFL
Sbjct: 149 VESVIQQPIPQGSVKHKVSARGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 205


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