BLASTX nr result

ID: Coptis23_contig00004477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004477
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141732.1| PREDICTED: uncharacterized protein LOC101211...    83   5e-14
ref|XP_004155895.1| PREDICTED: uncharacterized LOC101211901 [Cuc...    82   1e-13
ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|2...    82   1e-13
emb|CBI35799.3| unnamed protein product [Vitis vinifera]               79   1e-12
ref|XP_002265894.1| PREDICTED: uncharacterized protein LOC100258...    79   1e-12

>ref|XP_004141732.1| PREDICTED: uncharacterized protein LOC101211901 [Cucumis sativus]
          Length = 144

 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
 Frame = -3

Query: 562 FKPRNKVFLL-PTNQPCK----LFIRSSIQNKVFEDHSLGIICYKNESGEIICEGYDEGP 398
           FKP  +++++ PT  P K    L IRSS++NKVFED S G+ICY +E+GEIICEGYDEGP
Sbjct: 25  FKPITRIWMVKPTRLPLKNSFSLRIRSSMKNKVFEDQSEGVICYADENGEIICEGYDEGP 84

Query: 397 RFHKQQVQRKTYHHRE 350
           RFH Q V  K  + RE
Sbjct: 85  RFH-QNVSEKGNNQRE 99


>ref|XP_004155895.1| PREDICTED: uncharacterized LOC101211901 [Cucumis sativus]
          Length = 145

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
 Frame = -3

Query: 562 FKPRNKVFLL-PTNQPCK----LFIRSSIQNKVFEDHSLGIICYKNESGEIICEGYDEGP 398
           FKP  +++++ PT  P K    L IRSS++NKVFED S G+ICY +E+GEIICEGYDEGP
Sbjct: 26  FKPITRIWMVKPTRLPLKNSFSLRIRSSMKNKVFEDQSEGVICYADENGEIICEGYDEGP 85

Query: 397 RFHKQQVQRKTYHHRE 350
           RFH Q V  +  + RE
Sbjct: 86  RFH-QNVSERGNNQRE 100


>ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|222873343|gb|EEF10474.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = -3

Query: 613 MAMGC--SYHGIVVHGSHIFKPRNKVFLLPTNQ---PCK----LFIRSSIQNK-VFEDHS 464
           MA+ C  S H +V     + KP +++ +L  N+   P K    L +RSS+Q K VFE+ +
Sbjct: 1   MAVACLSSPHILVQKSGPVIKPASRILMLQRNRSHVPLKKAPTLPVRSSLQAKLVFENRA 60

Query: 463 LGIICYKNESGEIICEGYDEGPRFHKQQVQRKTYHHRE 350
            GI+CY++ESGEIICEG+DEGPRFH QQ+Q  +YH R+
Sbjct: 61  EGIVCYRDESGEIICEGFDEGPRFH-QQLQCSSYHPRD 97


>emb|CBI35799.3| unnamed protein product [Vitis vinifera]
          Length = 105

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = -3

Query: 511 LFIRSSIQNKVFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVQRKTYHHRE 350
           L I+SS +NKVFED S GI+CY+++ GEI+CEGYDEGPR H  ++QRK YH R+
Sbjct: 16  LEIKSSFRNKVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLH-HELQRKNYHPRD 68


>ref|XP_002265894.1| PREDICTED: uncharacterized protein LOC100258290 [Vitis vinifera]
           gi|147793049|emb|CAN62135.1| hypothetical protein
           VITISV_043719 [Vitis vinifera]
          Length = 133

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 34/54 (62%), Positives = 44/54 (81%)
 Frame = -3

Query: 511 LFIRSSIQNKVFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVQRKTYHHRE 350
           L I+SS +NKVFED S GI+CY+++ GEI+CEGYDEGPR H  ++QRK YH R+
Sbjct: 44  LEIKSSFRNKVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLH-HELQRKNYHPRD 96


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