BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00004475
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [V...   423   e-116
emb|CBI15034.3| unnamed protein product [Vitis vinifera]              421   e-115
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   412   e-113
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...   407   e-111
emb|CAN73290.1| hypothetical protein VITISV_005894 [Vitis vinifera]   401   e-109

>ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [Vitis vinifera]
          Length = 308

 Score =  423 bits (1087), Expect = e-116
 Identities = 202/312 (64%), Positives = 238/312 (76%)
 Frame = +2

Query: 179  MGFTSLQVSMDTSDWFQGTNNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 358
            MG T L V MD+S+W QGT +EE  M+SS P GDM+TCSRP+ E++LRPQHDQALKCPRC
Sbjct: 1    MGLTFLPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRC 60

Query: 359  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSVKKSNDDHX 538
            DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V+ KKSN DH 
Sbjct: 61   DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSN-DHS 119

Query: 539  XXXXXXXXXHDATDLQLSFPHEVQLSHLNTLLANNGDLGNHNFMDSKYNSMVENHRQFDF 718
                     H+ TDL LSFP EVQ SHL+ LL ++G LGNH+FM+SKYN M+EN R  DF
Sbjct: 120  INQNPGPSSHNPTDLHLSFP-EVQFSHLSNLLGSHGGLGNHSFMESKYNGMLENARPIDF 178

Query: 719  MESKFSNLFSNHRNHDFMGNTDLGLVSGLSNASSHDLTSNFHDQFSQYGISFTGNNANVM 898
            ME KF  +  + RNHDFMGN +LG+  GL + S   L  NFH   S +G++  GN  N M
Sbjct: 179  MEGKFEAIVGSSRNHDFMGNCELGM-GGLGDMSHGGLAPNFHGLCSPFGVTLDGNGGNFM 237

Query: 899  DNCQRIMLPFDGVENQNAIEMKPNRQLLSLDWQDQGCSEVIGKDSFGYFNGMGSWNGGIM 1078
            D CQR+MLP++G   QNA+++KPN +LLSLDWQDQGCS+  GKDSF Y N +GSWNG + 
Sbjct: 238  DTCQRLMLPYEGNVEQNAMDVKPNTKLLSLDWQDQGCSDA-GKDSFVYLNSLGSWNGMMS 296

Query: 1079 NCYGSSTTNSLV 1114
            N YG STTN LV
Sbjct: 297  NGYGPSTTNPLV 308


>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  421 bits (1083), Expect = e-115
 Identities = 201/311 (64%), Positives = 237/311 (76%)
 Frame = +2

Query: 179  MGFTSLQVSMDTSDWFQGTNNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 358
            MG T L V MD+S+W QGT +EE  M+SS P GDM+TCSRP+ E++LRPQHDQALKCPRC
Sbjct: 1    MGLTFLPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRC 60

Query: 359  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSVKKSNDDHX 538
            DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V+ KKSN DH 
Sbjct: 61   DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSN-DHS 119

Query: 539  XXXXXXXXXHDATDLQLSFPHEVQLSHLNTLLANNGDLGNHNFMDSKYNSMVENHRQFDF 718
                     H+ TDL LSFP EVQ SHL+ LL ++G LGNH+FM+SKYN M+EN R  DF
Sbjct: 120  INQNPGPSSHNPTDLHLSFP-EVQFSHLSNLLGSHGGLGNHSFMESKYNGMLENARPIDF 178

Query: 719  MESKFSNLFSNHRNHDFMGNTDLGLVSGLSNASSHDLTSNFHDQFSQYGISFTGNNANVM 898
            ME KF  +  + RNHDFMGN +LG+  GL + S   L  NFH   S +G++  GN  N M
Sbjct: 179  MEGKFEAIVGSSRNHDFMGNCELGM-GGLGDMSHGGLAPNFHGLCSPFGVTLDGNGGNFM 237

Query: 899  DNCQRIMLPFDGVENQNAIEMKPNRQLLSLDWQDQGCSEVIGKDSFGYFNGMGSWNGGIM 1078
            D CQR+MLP++G   QNA+++KPN +LLSLDWQDQGCS+  GKDSF Y N +GSWNG + 
Sbjct: 238  DTCQRLMLPYEGNVEQNAMDVKPNTKLLSLDWQDQGCSDA-GKDSFVYLNSLGSWNGMMS 296

Query: 1079 NCYGSSTTNSL 1111
            N YG STTN L
Sbjct: 297  NGYGPSTTNPL 307


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
            gi|222858725|gb|EEE96272.1| f-box family protein [Populus
            trichocarpa]
          Length = 312

 Score =  412 bits (1060), Expect = e-113
 Identities = 203/315 (64%), Positives = 240/315 (76%), Gaps = 3/315 (0%)
 Frame = +2

Query: 179  MGFTSLQVSMDTSDWFQGTNNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 358
            MG TSLQV MD+SDW QGT N+E  M+SS P GDM+TCSRP+ E++LRP HDQALKCPRC
Sbjct: 1    MGLTSLQVCMDSSDWLQGTINDESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 359  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSVKKSNDDHX 538
            DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+VS K ++    
Sbjct: 61   DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSKKSNDQSVN 120

Query: 539  XXXXXXXXXHDATDLQLSFPHEVQLSHLNTLLANNGDLGNHNFMDSKYN-SMVENHRQFD 715
                     H+ TDL LSFP EVQLSHLN++L + G +   NFMDSKYN  M+EN R  D
Sbjct: 121  QINPGSSSSHNPTDLHLSFP-EVQLSHLNSILGSQGTIATSNFMDSKYNIGMLENPRPID 179

Query: 716  FMESKFSNLFSNHRNHDFMGNTDLGLVSGLSNAS-SHDLTSNFHDQFSQYGISFTGNNAN 892
            FM+SK   L  + RN+DFMGN DLG+VSGL + S  H L  NF D  S +G+S  GN+  
Sbjct: 180  FMDSKLEALVGSSRNYDFMGNGDLGMVSGLGDTSHHHGLAPNFSDICSSFGMSLDGNSGT 239

Query: 893  VMDNCQRIMLPF-DGVENQNAIEMKPNRQLLSLDWQDQGCSEVIGKDSFGYFNGMGSWNG 1069
             M+ CQR+MLP+  G  +QNAI++KPN +LLSLDWQDQGCS+  GKD+FGY N +GSW  
Sbjct: 240  FMETCQRLMLPYGQGNNDQNAIDVKPNTKLLSLDWQDQGCSDG-GKDTFGYLNNLGSWT- 297

Query: 1070 GIMNCYGSSTTNSLV 1114
            G+MN YGSSTTN+LV
Sbjct: 298  GMMNGYGSSTTNTLV 312


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
            gi|222868596|gb|EEF05727.1| f-box family protein [Populus
            trichocarpa]
          Length = 314

 Score =  407 bits (1047), Expect = e-111
 Identities = 199/316 (62%), Positives = 238/316 (75%), Gaps = 4/316 (1%)
 Frame = +2

Query: 179  MGFTSLQVSMDTSDWFQGTNNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 358
            MG  SLQV MD+SDW QGT NEE  M+SS P GDM+TCSRP+ E++LRP HDQALKCPRC
Sbjct: 1    MGLNSLQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 359  DSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSVKKSNDDHX 538
            DS HTKFCYYNNYSLSQPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+VS K ++    
Sbjct: 61   DSAHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSKKSNDQSVN 120

Query: 539  XXXXXXXXXHDATDLQLSFPHEVQLSHLNTLLANNGDLGNHNFMDSKYN-SMVENHRQFD 715
                     H+ TDL LSFP +VQLSHL+ +L +   L N NFM+SKYN  M+EN R  D
Sbjct: 121  QINTGSSSSHNPTDLHLSFPDQVQLSHLHNILGSQETLANPNFMESKYNIGMLENPRPVD 180

Query: 716  FMESKFSNLFSNHRNHDFMGNTDLGLVSGLSNAS-SHDLTSNFHDQFSQYGISFTGNNAN 892
            FM+SKF  L  + RN+DFMGN DLG+VSGL + S  H L  N+    S +G+S  GN+ +
Sbjct: 181  FMDSKFEALVGSSRNYDFMGNGDLGMVSGLGDMSHHHGLAPNYSGYCSPFGMSLDGNSGS 240

Query: 893  VMDNCQRIMLPFD--GVENQNAIEMKPNRQLLSLDWQDQGCSEVIGKDSFGYFNGMGSWN 1066
             M+ CQR+MLP+D     +QN I++KPN +LLSLDWQDQGCS+V GKD+FGY N +GSW 
Sbjct: 241  FMETCQRLMLPYDQGNDHDQNPIDVKPNTKLLSLDWQDQGCSDV-GKDTFGYLNNLGSWT 299

Query: 1067 GGIMNCYGSSTTNSLV 1114
             G+MN YGSSTTN+LV
Sbjct: 300  -GMMNGYGSSTTNTLV 314


>emb|CAN73290.1| hypothetical protein VITISV_005894 [Vitis vinifera]
          Length = 321

 Score =  401 bits (1031), Expect = e-109
 Identities = 192/296 (64%), Positives = 226/296 (76%)
 Frame = +2

Query: 227  QGTNNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRCDSTHTKFCYYNNYSLS 406
            QGT +EE  M+SS P GDM+TCSRP+ E++LRPQHDQALKCPRCDSTHTKFCYYNNYSLS
Sbjct: 30   QGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRCDSTHTKFCYYNNYSLS 89

Query: 407  QPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRVSVKKSNDDHXXXXXXXXXXHDATDLQ 586
            QPRYFCKTCRRYWTKGG+LRNIPVGGGCRKNK+V+ KKSN DH          H+ TDL 
Sbjct: 90   QPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVASKKSN-DHSINQNPGPSSHNPTDLH 148

Query: 587  LSFPHEVQLSHLNTLLANNGDLGNHNFMDSKYNSMVENHRQFDFMESKFSNLFSNHRNHD 766
            LSFP EVQ SHL+ LL ++G LGNH+FM+SKYN M+EN R  DFME KF  +  + RNHD
Sbjct: 149  LSFP-EVQFSHLSNLLGSHGGLGNHSFMESKYNGMLENARPIDFMEGKFEAIVGSSRNHD 207

Query: 767  FMGNTDLGLVSGLSNASSHDLTSNFHDQFSQYGISFTGNNANVMDNCQRIMLPFDGVENQ 946
            FMGN +LG+  GL + S   L  NFH   S +G++   N  N MD CQR+MLP++G   Q
Sbjct: 208  FMGNCELGM-GGLGDMSHGGLAPNFHGLCSPFGVTLDXNGGNFMDTCQRLMLPYEGNVEQ 266

Query: 947  NAIEMKPNRQLLSLDWQDQGCSEVIGKDSFGYFNGMGSWNGGIMNCYGSSTTNSLV 1114
            NA+++KPN +LLSLDWQDQGCS+  GKDSF Y N +GSWNG + N YG STTN LV
Sbjct: 267  NAMDVKPNTKLLSLDWQDQGCSDA-GKDSFVYLNSLGSWNGMMSNGYGPSTTNPLV 321